BLASTX nr result

ID: Bupleurum21_contig00024173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024173
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313579.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07
ref|XP_002263764.1| PREDICTED: UPF0712 protein C7orf64 homolog [...    57   2e-06
emb|CAN63941.1| hypothetical protein VITISV_032503 [Vitis vinifera]    57   2e-06
ref|XP_002525357.1| nucleic acid binding protein, putative [Rici...    56   3e-06
ref|XP_004161064.1| PREDICTED: RNA-binding protein 48-like [Cucu...    55   5e-06

>ref|XP_002313579.1| predicted protein [Populus trichocarpa] gi|222849987|gb|EEE87534.1|
           predicted protein [Populus trichocarpa]
          Length = 234

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/40 (75%), Positives = 36/40 (90%), Gaps = 1/40 (2%)
 Frame = +1

Query: 1   SMNQTVQLVREKLHKIQSSADHLEVG-LPKKPRVDNRRRI 117
           SMNQTV+LVREKL+KIQSS++HL+ G + KK RVDNRRRI
Sbjct: 195 SMNQTVRLVREKLNKIQSSSEHLQAGPVSKKARVDNRRRI 234


>ref|XP_002263764.1| PREDICTED: UPF0712 protein C7orf64 homolog [Vitis vinifera]
           gi|297739067|emb|CBI28556.3| unnamed protein product
           [Vitis vinifera]
          Length = 230

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/40 (77%), Positives = 33/40 (82%), Gaps = 1/40 (2%)
 Frame = +1

Query: 1   SMNQTVQLVREKLHKIQSSADHLEVGLP-KKPRVDNRRRI 117
           SMNQTV+LVREKL KIQSS+ HLE G   KK RVDNRRRI
Sbjct: 191 SMNQTVRLVREKLDKIQSSSQHLEAGPAFKKTRVDNRRRI 230


>emb|CAN63941.1| hypothetical protein VITISV_032503 [Vitis vinifera]
          Length = 230

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/40 (77%), Positives = 33/40 (82%), Gaps = 1/40 (2%)
 Frame = +1

Query: 1   SMNQTVQLVREKLHKIQSSADHLEVGLP-KKPRVDNRRRI 117
           SMNQTV+LVREKL KIQSS+ HLE G   KK RVDNRRRI
Sbjct: 191 SMNQTVRLVREKLDKIQSSSQHLEAGPAFKKTRVDNRRRI 230


>ref|XP_002525357.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223535320|gb|EEF36995.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 216

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 30/40 (75%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
 Frame = +1

Query: 1   SMNQTVQLVREKLHKIQSSADHLE-VGLPKKPRVDNRRRI 117
           SMNQTV LVREKL+KIQSS++HL+ V   KK RVDNRRRI
Sbjct: 177 SMNQTVSLVREKLNKIQSSSEHLQAVPASKKSRVDNRRRI 216


>ref|XP_004161064.1| PREDICTED: RNA-binding protein 48-like [Cucumis sativus]
          Length = 258

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 29/40 (72%), Positives = 33/40 (82%), Gaps = 1/40 (2%)
 Frame = +1

Query: 1   SMNQTVQLVREKLHKIQSSADHLEVG-LPKKPRVDNRRRI 117
           SMNQTV LVREKL KIQSS++HL+ G   KK R+DNRRRI
Sbjct: 219 SMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI 258


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