BLASTX nr result

ID: Bupleurum21_contig00024166 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024166
         (1518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002333429.1| predicted protein [Populus trichocarpa] gi|2...   219   1e-54
ref|XP_002332257.1| predicted protein [Populus trichocarpa] gi|2...   219   2e-54
gb|ABA97970.1| retrotransposon protein, putative, unclassified, ...   213   1e-52
ref|XP_002330315.1| predicted protein [Populus trichocarpa] gi|2...   209   1e-51
ref|XP_003524238.1| PREDICTED: uncharacterized protein LOC100782...   209   2e-51

>ref|XP_002333429.1| predicted protein [Populus trichocarpa] gi|222836623|gb|EEE75016.1|
            predicted protein [Populus trichocarpa]
          Length = 389

 Score =  219 bits (558), Expect = 1e-54
 Identities = 130/375 (34%), Positives = 204/375 (54%), Gaps = 10/375 (2%)
 Frame = -3

Query: 1177 PKMDFPKFDGVDARSWVRKCHKYFLLNPMGDSDKILMAGMNLDGQAEYWFLDHVEGRD-- 1004
            P+M+   F G D R W+RKC KYF ++ +     I +    L+G+A+ WF   V G D  
Sbjct: 16   PRMELSTFRGEDPRGWMRKCKKYFRIHSIPAHQWIEVVSYYLEGKADVWFEGLVRGSDSL 75

Query: 1003 IAWNVFVEMFVARFTSVKNDDIIGEFNKLKQIGSVDRYIEKFAELRSFMLQRDRHLDEYY 824
            I W  F +    RF S   DDI+ EFNKL Q  ++D YIE+F ELRS M   +  L E Y
Sbjct: 76   IEWEEFSQDLCRRFGS--KDDIVEEFNKLIQDENMDDYIERFEELRSLMGDLNPLLPEAY 133

Query: 823  FMRSFFSGLKDEVRHMVELLAPHTLEQAYLMARKQEVVLDSMHKTSRNVAQSVTPWQKES 644
            ++ SF SGLKDE++ M+++L P  +  A+  A+ QE   +++ K +R++ +S  P+    
Sbjct: 134  YVSSFISGLKDEIKPMLKILKPARVLVAFEQAKWQEEANNALTKKTRSLQRSNPPFH--- 190

Query: 643  TTEVKRNGSPDV--SNKSLPARRLSKEELDARRRKGLCFNCDEVYSYGHQCKKLFVILLD 470
            +  +  N        +++   +  S    + R++ G CF C + Y  GH+C    + +++
Sbjct: 191  SGRIPGNAPSKYFGPSRTKGVKPFSDSLYEQRKKLGQCFKCGDKYMPGHRCNSKGLHMIE 250

Query: 469  -----DDQESGTGLTRFTDEEE-EDFGVSLHALKGQVPMDTIKLAGKVQNNQLIILVDSG 308
                 +D+E G         ++ +++G+SL+AL      +TI++ G  Q   LIIL+DSG
Sbjct: 251  GVEGGEDEEIGEFEDNMQGTDQIDEYGLSLNALADNDTYNTIRIKGNCQGQNLIILIDSG 310

Query: 307  STHSFLDTGAAKRLRCEVELTNPLQVTVGGGGRIECNSKCPQLEWEMAGHLFAASMRILP 128
            STHSF++    K L      T  L VTV  G  + C + CP   W M  + F +++R+L 
Sbjct: 311  STHSFINESTIKALNATTSKTTLLAVTVANGNVMLCETHCPAFTWFMHSYEFKSNLRVLE 370

Query: 127  LGGYDMVLGVDLMKK 83
            LG +D+VLGVD +KK
Sbjct: 371  LGRHDLVLGVDWLKK 385


>ref|XP_002332257.1| predicted protein [Populus trichocarpa] gi|222832022|gb|EEE70499.1|
            predicted protein [Populus trichocarpa]
          Length = 389

 Score =  219 bits (557), Expect = 2e-54
 Identities = 130/375 (34%), Positives = 203/375 (54%), Gaps = 10/375 (2%)
 Frame = -3

Query: 1177 PKMDFPKFDGVDARSWVRKCHKYFLLNPMGDSDKILMAGMNLDGQAEYWFLDHVEGRD-- 1004
            P+M+   F G D R W+RKC KYF ++ +     I +    L+G+A+ WF   V G D  
Sbjct: 16   PRMELSTFRGEDPRGWMRKCKKYFRIHSIPAHQWIEVVSYYLEGKADVWFEGLVRGSDSL 75

Query: 1003 IAWNVFVEMFVARFTSVKNDDIIGEFNKLKQIGSVDRYIEKFAELRSFMLQRDRHLDEYY 824
            I W  F +    RF S   DDI+ EFNKL Q  ++D YIE+F ELRS M   +  L E Y
Sbjct: 76   IEWEEFSQDLCRRFGS--KDDIVEEFNKLIQDENMDDYIERFEELRSLMGDLNPLLPEAY 133

Query: 823  FMRSFFSGLKDEVRHMVELLAPHTLEQAYLMARKQEVVLDSMHKTSRNVAQSVTPWQKES 644
            ++ SF SGLKDE++ M+++L P  +  A+  A+ QE   +++ K +R++ +S  P+    
Sbjct: 134  YVSSFISGLKDEIKPMLKILKPARVLVAFEQAKWQEEANNALTKKTRSLQRSNPPFH--- 190

Query: 643  TTEVKRNGSPDV--SNKSLPARRLSKEELDARRRKGLCFNCDEVYSYGHQCKKLFVILLD 470
            +  +  N        +++   +  S    + R++ G CF C + Y  GH+C    + +++
Sbjct: 191  SGRIPGNAPSKYFGPSRTKGVKPFSDSLYEQRKKLGQCFKCGDKYMPGHRCNSKGLHMIE 250

Query: 469  -----DDQESGTGLTRFTDEEE-EDFGVSLHALKGQVPMDTIKLAGKVQNNQLIILVDSG 308
                 +D+E G         ++ +++G+SL+AL      +TI++ G  Q   LIIL+DSG
Sbjct: 251  GVEGGEDEEIGEFEDNMQGTDQIDEYGLSLNALADNDTYNTIRIKGNCQGQNLIILIDSG 310

Query: 307  STHSFLDTGAAKRLRCEVELTNPLQVTVGGGGRIECNSKCPQLEWEMAGHLFAASMRILP 128
            STHSF++    K L      T  L VTV  G  + C   CP   W M  + F +++R+L 
Sbjct: 311  STHSFINESTIKALNATTSKTTLLAVTVANGNVMLCEKHCPAFTWFMHNYEFKSNLRVLE 370

Query: 127  LGGYDMVLGVDLMKK 83
            LG +D+VLGVD +KK
Sbjct: 371  LGRHDLVLGVDWLKK 385


>gb|ABA97970.1| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group]
          Length = 1548

 Score =  213 bits (542), Expect = 1e-52
 Identities = 138/409 (33%), Positives = 200/409 (48%), Gaps = 17/409 (4%)
 Frame = -3

Query: 1177 PKMDFPKFDGVDARSWVRKCHKYFLLNPMGDSDKILMAGMNLDGQAEYWFLDHVEGRDIA 998
            PKMDFP+FDG D R W+  C  YF    + +  ++  A +N+ G A  W+       +  
Sbjct: 149  PKMDFPRFDGTDVRVWLDNCETYFGFYQITEGFQVSAASLNMIGDAANWY--QAWKLETG 206

Query: 997  WNVFVEM-------FVARFTSVKNDDIIGEFNKLKQIGSVDRYIEKFAELRSFMLQRDRH 839
            W+ +  +       F     SVK D+++     L Q GSV  Y  KF +L   +   D  
Sbjct: 207  WHNWESLKTAVLNEFEVNLESVKMDELL----LLTQTGSVTEYRSKFNQLVYQLRLYDPL 262

Query: 838  LDEYYFMRSFFSGLKDEVRHMVELLAPHTLEQAYLMARKQEVVLDSMHKTSRNVAQSVTP 659
            L + + +R F  GLKDE+R  V+   P ++ QAYL+A   E                   
Sbjct: 263  LSDTFLIRHFLLGLKDELRSAVQAQQPTSVSQAYLVALAHE-------SAQLGTGTKKGH 315

Query: 658  WQKESTTEVKRNGSPDVSNKSLPARRLSKEEL-DARRRKGLCFNCDEVYSYGHQCKK--- 491
            ++KE    V   G+  +  K  P      ++L + RR +GLCF C E Y+ GH C K   
Sbjct: 316  YKKE---HVAIRGTDKL--KLAPGELWKAQQLKEYRRAQGLCFKCGEKYAPGHVCAKQEG 370

Query: 490  --LFVILLDDDQE--SGTGLTRFT--DEEEEDFGVSLHALKGQVPMDTIKLAGKVQNNQL 329
              L  + + ++ E  S   L   T  D   +   +SLHA+ G  P  T++L   VQN  +
Sbjct: 371  VQLKALHVQEESEVLSDEVLDAITALDVSSDSISLSLHAMAGTCPSHTVQLRALVQNQVI 430

Query: 328  IILVDSGSTHSFLDTGAAKRLRCEVELTNPLQVTVGGGGRIECNSKCPQLEWEMAGHLFA 149
            IILVDSGSTHSF+D G   RL+   E   P  V V  G  + C +K PQ  W + GH F+
Sbjct: 431  IILVDSGSTHSFIDAGLCHRLQLSTESIQPTSVRVANGETLCCEAKVPQFAWWVQGHEFS 490

Query: 148  ASMRILPLGGYDMVLGVDLMKKLGPVMLDYDKHTITFDHKGEKIMVPGI 2
              MR+LP+GGYD+VLG+D + +  P+  D+    + F + G  I + GI
Sbjct: 491  FPMRVLPMGGYDLVLGMDWLTQFSPMTCDWAAKQLQFSYNGSVITLKGI 539


>ref|XP_002330315.1| predicted protein [Populus trichocarpa] gi|222871350|gb|EEF08481.1|
            predicted protein [Populus trichocarpa]
          Length = 528

 Score =  209 bits (533), Expect = 1e-51
 Identities = 128/390 (32%), Positives = 205/390 (52%), Gaps = 15/390 (3%)
 Frame = -3

Query: 1177 PKMDFPKFDGVDARSWVRKCHKYFLLNPMGDSDKILMAGMNLDGQAEYWFLDHVEGRDIA 998
            P+++ P F G + R W+RKC KYF +N +     + +    L G+A+ WF   +   + +
Sbjct: 127  PRVELPTFRGENPRGWLRKCRKYFKMNTIPAHQWVEVVSYYLKGKADIWFEGLIRENE-S 185

Query: 997  W---NVFVEMFVARFTSVKNDDIIGEFNKLKQIGSVDRYIEKFAELRSFMLQRDRHLDEY 827
            W     F ++   RF S   +D + EFNKL Q  SVD YI++F ELRS M   +  L E+
Sbjct: 186  WMDLEEFAQILCRRFGS--REDSVEEFNKLIQDKSVDDYIKRFEELRSLMSALNSSLTEF 243

Query: 826  YFMRSFFSGLKDEVRHMVELLAPHTLEQAYLMARKQEVVLDSMHKTSRNVAQSVTPWQKE 647
            Y++ SF +GLK++++ M+++L P  +  A+  AR QE   +++ + SR V +S T +   
Sbjct: 244  YYVSSFINGLKEDIKPMLKILKPANVLMAFEQARWQEKSNNALTRRSRLVQRSNTTF--- 300

Query: 646  STTEVKRNGSPDVSNKSLPARRLSKEE--LDARRRKGLCFNCDEVYSYGHQCKKLFVILL 473
            +   V  N  P   N +     +   +   + R+R G CF C + Y+ GH+C    + ++
Sbjct: 301  NNGRVASNAPPTAFNPNRMEGGIPHSDSLFEQRKRLGQCFKCGDKYTPGHRCNTKGLHMI 360

Query: 472  DDDQESGTGLTRFTDEEEED----------FGVSLHALKGQVPMDTIKLAGKVQNNQLII 323
            +  +E      +  D+  +D          FG+SL+AL      +TI++ G  Q   LII
Sbjct: 361  ERVEEEEDEEVKELDDIMQDKCKERRLIDEFGLSLNALAENDTCNTIRIKGNCQGRDLII 420

Query: 322  LVDSGSTHSFLDTGAAKRLRCEVELTNPLQVTVGGGGRIECNSKCPQLEWEMAGHLFAAS 143
             + SGSTHSF+D G    L      T  L VTV  G  + C  + P   W M G+ F A+
Sbjct: 421  FIVSGSTHSFIDEGTITELNVAKSKTMLLAVTVANGTVMLCEMQSPGFTWFMQGYEFKAN 480

Query: 142  MRILPLGGYDMVLGVDLMKKLGPVMLDYDK 53
            +R+L L  +D++LGVD +K+  PV+ D+ K
Sbjct: 481  LRVLKLDRHDIMLGVDWLKQYSPVLFDFIK 510


>ref|XP_003524238.1| PREDICTED: uncharacterized protein LOC100782971 [Glycine max]
          Length = 1863

 Score =  209 bits (531), Expect = 2e-51
 Identities = 134/406 (33%), Positives = 199/406 (49%), Gaps = 15/406 (3%)
 Frame = -3

Query: 1183 VAPKMDFPKFDGVDARSWVRKCHKYFLLNPMGDSDKILMAGMNLDGQAEYWFL-DHVEGR 1007
            +A K+D P FDG D   W+ K  ++F      + ++I +A   LDG A  WF   H  G 
Sbjct: 28   LANKLDVPCFDGHDPLGWIFKISQFFEYQGTPEEERITVASFYLDGAALSWFQWMHQNGF 87

Query: 1006 DIAWNVFVEMFVARFTSVKNDDIIGEFNKLKQIGSVDRYIEKFAELRSFMLQRDRHLDEY 827
              +W   ++    RF     DD  G   KL Q  SV  Y+ +F  L + ++     L   
Sbjct: 88   ITSWPALLQAIETRFAPSFYDDPRGALFKLTQRASVTEYLTEFERLANRIVG----LSPP 143

Query: 826  YFMRSFFSGLKDEVRHMVELLAPHTLEQAYLMARKQEVVLDSMHKTSRNVAQSVTPWQKE 647
              +  F SGL  E+R  V+   P +L  A  +AR QE  L+   K SR    S+ P Q  
Sbjct: 144  MLLSCFVSGLNTEIRREVQAFQPVSLPHAMALARLQEDKLNDRRKHSRT---SLPPPQTP 200

Query: 646  STTEVKRNGSPDVSNKSLPARRLSKEELDARRRKGLCFNCDEVYSYGHQCK-KLFVILLD 470
            S +   ++  P       P  + + EE+  RR KGLC+NC+E +S  H+CK ++ + + D
Sbjct: 201  SPSLTTQHQPPRTKP---PFVQRTPEEMAYRREKGLCYNCEEKWSSSHRCKGRVLLFIAD 257

Query: 469  DDQESGTGLTRFTDEEEEDFG-------------VSLHALKGQVPMDTIKLAGKVQNNQL 329
             D+ S        D                    +SLHA+ G    DT +L G + + ++
Sbjct: 258  SDEASSMDNPSMEDPAPPTQATLPPFDPTPLLPHISLHAMAGVPATDTFRLYGVINHTRV 317

Query: 328  IILVDSGSTHSFLDTGAAKRLRCEVELTNPLQVTVGGGGRIECNSKCPQLEWEMAGHLFA 149
             ILVDSGSTH+F+    AK L   +E T  LQV VG G  +EC   CP     +  H F 
Sbjct: 318  TILVDSGSTHNFVQPRIAKFLGLPMEDTTSLQVMVGNGSVLECKQSCPATTLLLQQHSFT 377

Query: 148  ASMRILPLGGYDMVLGVDLMKKLGPVMLDYDKHTITFDHKGEKIMV 11
             ++R+LP+ G D+VLGV+ ++ LGP++ DY   T+ F H G+ I++
Sbjct: 378  VTLRVLPISGADVVLGVEWLRTLGPIITDYTSFTMQFTHLGQPIIL 423


Top