BLASTX nr result

ID: Bupleurum21_contig00024148 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024148
         (1184 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273570.1| PREDICTED: protein transport protein SFT2 [V...   281   2e-85
ref|XP_002320536.1| predicted protein [Populus trichocarpa] gi|2...   273   6e-85
ref|XP_002532175.1| Protein transport protein SFT2, putative [Ri...   264   2e-82
gb|ACN85162.1| putative SFT2 protein [Oryza nivara]                   259   5e-81
ref|XP_004139775.1| PREDICTED: protein transport protein SFT2-li...   265   7e-81

>ref|XP_002273570.1| PREDICTED: protein transport protein SFT2 [Vitis vinifera]
           gi|296089976|emb|CBI39795.3| unnamed protein product
           [Vitis vinifera]
          Length = 232

 Score =  281 bits (719), Expect(2) = 2e-85
 Identities = 138/160 (86%), Positives = 154/160 (96%), Gaps = 3/160 (1%)
 Frame = -1

Query: 893 VSKGVQNIPGNFQS---NVPSGKSLLYFGLLLASGVFFVFIAFTMFLPVMMLMPQKFAIC 723
           VSKGV+++PGN QS   NVPSG+SL+YFG+LLA+GVFFVFIAFTMFLPVM+LMPQKFA+C
Sbjct: 73  VSKGVRDLPGNIQSATSNVPSGRSLMYFGILLATGVFFVFIAFTMFLPVMVLMPQKFALC 132

Query: 722 FTIGCAFIIGSFFALKGPKNQLAHMTSKERLPFTLGFIGSMVGTIYVSMVLHSYVLSALF 543
           FTIGC+FIIGSFFALKGPKNQLAHM++KERLPFTLGFIGSMVGTIYVSMVLHSY+LS LF
Sbjct: 133 FTIGCSFIIGSFFALKGPKNQLAHMSTKERLPFTLGFIGSMVGTIYVSMVLHSYILSVLF 192

Query: 542 SVLQVLALSYYALSYFPGGSAGLKFLSSTLTSSILRCFGR 423
           SVLQVLAL+YYA+SYFPGGSAGLKFLSS LTSSIL+CFGR
Sbjct: 193 SVLQVLALAYYAISYFPGGSAGLKFLSSALTSSILKCFGR 232



 Score = 62.4 bits (150), Expect(2) = 2e-85
 Identities = 33/66 (50%), Positives = 46/66 (69%), Gaps = 4/66 (6%)
 Frame = -2

Query: 1123 QAWFSGPSANADDLPK----QSPSLLADWNAYAASTRATEEDDLDSSALGFDLEAAVRTA 956
            Q+WFS   + ++DL K     S SLLA WN+YAA +R++EE+      +GFDLE+AVR+A
Sbjct: 5    QSWFS--PSGSEDLQKASSSSSSSLLAQWNSYAAESRSSEEEGSLGMGMGFDLESAVRSA 62

Query: 955  NDKVSG 938
            ND V+G
Sbjct: 63   NDTVTG 68


>ref|XP_002320536.1| predicted protein [Populus trichocarpa] gi|222861309|gb|EEE98851.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score =  273 bits (699), Expect(2) = 6e-85
 Identities = 135/160 (84%), Positives = 150/160 (93%), Gaps = 3/160 (1%)
 Frame = -1

Query: 893 VSKGVQNIPGNFQS---NVPSGKSLLYFGLLLASGVFFVFIAFTMFLPVMMLMPQKFAIC 723
           VSKGV++IPG+FQS   NVPSG+S +YFG+LLA+GVFFVFIAFTMFLPVM+L+PQKFAIC
Sbjct: 146 VSKGVRDIPGSFQSSTINVPSGQSFVYFGILLAAGVFFVFIAFTMFLPVMVLVPQKFAIC 205

Query: 722 FTIGCAFIIGSFFALKGPKNQLAHMTSKERLPFTLGFIGSMVGTIYVSMVLHSYVLSALF 543
           FTIGCA I+ SFFALKGPKNQLAHM SKERLPFTLGFI +MVGT+YVSMVLHSY+LS LF
Sbjct: 206 FTIGCALIVASFFALKGPKNQLAHMISKERLPFTLGFISTMVGTVYVSMVLHSYILSVLF 265

Query: 542 SVLQVLALSYYALSYFPGGSAGLKFLSSTLTSSILRCFGR 423
           SVLQVLALSYYA+SYFPGGS GLKFLSSTLT+SILRCFGR
Sbjct: 266 SVLQVLALSYYAISYFPGGSTGLKFLSSTLTASILRCFGR 305



 Score = 68.6 bits (166), Expect(2) = 6e-85
 Identities = 41/69 (59%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
 Frame = -2

Query: 1138 MHKTAQAWFSG-PSANAD-DLPKQSPSLLADWNAYAASTRATEEDDLDSSALGFDLEAAV 965
            M KTAQ+WF+G P+ N        SPSLL+DWNAYAAS  +      DSSA  FDLEAAV
Sbjct: 79   MQKTAQSWFTGGPTFNDQKSSSSSSPSLLSDWNAYAASQES------DSSAPVFDLEAAV 132

Query: 964  RTANDKVSG 938
            RT +DKVSG
Sbjct: 133  RTTSDKVSG 141


>ref|XP_002532175.1| Protein transport protein SFT2, putative [Ricinus communis]
           gi|223528143|gb|EEF30212.1| Protein transport protein
           SFT2, putative [Ricinus communis]
          Length = 231

 Score =  264 bits (675), Expect(2) = 2e-82
 Identities = 128/159 (80%), Positives = 146/159 (91%), Gaps = 3/159 (1%)
 Frame = -1

Query: 893 VSKGVQNIPGNFQS---NVPSGKSLLYFGLLLASGVFFVFIAFTMFLPVMMLMPQKFAIC 723
           VSKGV++IPG+FQS   N+PSGK+L+YFGL LA+GVFFVFIAF +FLPV++LMPQKFAIC
Sbjct: 72  VSKGVRDIPGSFQSATSNIPSGKALMYFGLFLATGVFFVFIAFALFLPVIVLMPQKFAIC 131

Query: 722 FTIGCAFIIGSFFALKGPKNQLAHMTSKERLPFTLGFIGSMVGTIYVSMVLHSYVLSALF 543
           FT+GC FII SF ALKGPKNQ AHMTSKERLPFTLGFIGSM GTIYVSMVLHSY+LS LF
Sbjct: 132 FTLGCVFIIASFVALKGPKNQFAHMTSKERLPFTLGFIGSMAGTIYVSMVLHSYILSVLF 191

Query: 542 SVLQVLALSYYALSYFPGGSAGLKFLSSTLTSSILRCFG 426
           SV+QVLAL+YYA+SYFPGGSAG+KFLSS+L SS+ RCFG
Sbjct: 192 SVIQVLALAYYAISYFPGGSAGMKFLSSSLISSVTRCFG 230



 Score = 69.3 bits (168), Expect(2) = 2e-82
 Identities = 38/70 (54%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
 Frame = -2

Query: 1138 MHKTAQAWFSGPSANADDL---PKQSPSLLADWNAYAASTRATEEDDLDSSALGFDLEAA 968
            M K AQ WFS    + +D    P+ S SLLADWN+YAAS  A E   L    +GFDLEA 
Sbjct: 1    MQKMAQGWFSSSGTSGEDQQQKPQSSSSLLADWNSYAASQDADESSGL---GIGFDLEAV 57

Query: 967  VRTANDKVSG 938
            VR+AND VSG
Sbjct: 58   VRSANDSVSG 67


>gb|ACN85162.1| putative SFT2 protein [Oryza nivara]
          Length = 231

 Score =  259 bits (663), Expect(2) = 5e-81
 Identities = 126/160 (78%), Positives = 143/160 (89%), Gaps = 3/160 (1%)
 Frame = -1

Query: 893 VSKGVQNIPGNFQS---NVPSGKSLLYFGLLLASGVFFVFIAFTMFLPVMMLMPQKFAIC 723
           VSKGV  +PG+F+S   +VPS KSL+YFGL LASG+F VFIAFT+FLPVM++MPQKFAIC
Sbjct: 72  VSKGVLGLPGSFKSTTSSVPSSKSLVYFGLFLASGIFLVFIAFTIFLPVMVIMPQKFAIC 131

Query: 722 FTIGCAFIIGSFFALKGPKNQLAHMTSKERLPFTLGFIGSMVGTIYVSMVLHSYVLSALF 543
           FT+GCAFIIGSFFALKGPKNQL HM SKERLPFT+GF+GSM  TIYVSMVLHSY+LS  F
Sbjct: 132 FTVGCAFIIGSFFALKGPKNQLYHMISKERLPFTMGFVGSMAATIYVSMVLHSYILSVFF 191

Query: 542 SVLQVLALSYYALSYFPGGSAGLKFLSSTLTSSILRCFGR 423
           S LQVLAL+YYA+SYFPGGSAG+KFLSS L SS+LRCFGR
Sbjct: 192 SCLQVLALAYYAISYFPGGSAGMKFLSSALVSSVLRCFGR 231



 Score = 69.3 bits (168), Expect(2) = 5e-81
 Identities = 35/66 (53%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
 Frame = -2

Query: 1123 QAWFSGPSANADDLPKQS----PSLLADWNAYAASTRATEEDDLDSSALGFDLEAAVRTA 956
            QAWFSG   +A      S    PSLLA+WN+YAA+  A EE+D      G D+EAAVR+A
Sbjct: 2    QAWFSGTGPSASSASSSSSPPQPSLLAEWNSYAAARSAEEEEDGGGGGFGIDIEAAVRSA 61

Query: 955  NDKVSG 938
            ND+VSG
Sbjct: 62   NDRVSG 67


>ref|XP_004139775.1| PREDICTED: protein transport protein SFT2-like [Cucumis sativus]
           gi|449502881|ref|XP_004161769.1| PREDICTED: protein
           transport protein SFT2-like [Cucumis sativus]
          Length = 230

 Score =  265 bits (678), Expect(2) = 7e-81
 Identities = 129/160 (80%), Positives = 146/160 (91%), Gaps = 3/160 (1%)
 Frame = -1

Query: 893 VSKGVQNIPGNFQS---NVPSGKSLLYFGLLLASGVFFVFIAFTMFLPVMMLMPQKFAIC 723
           VSKGV+ +PGNFQS   NVPSGK+L+YFGL LA+GVFF+FIAFTMFLPVM+LMPQKFAIC
Sbjct: 71  VSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMVLMPQKFAIC 130

Query: 722 FTIGCAFIIGSFFALKGPKNQLAHMTSKERLPFTLGFIGSMVGTIYVSMVLHSYVLSALF 543
           FT+GC FIIGSFFALKGPKNQLAHM SKERLPFT+ FIGSM+GT+YVSM LHSY+LS  F
Sbjct: 131 FTLGCCFIIGSFFALKGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSMGLHSYILSVFF 190

Query: 542 SVLQVLALSYYALSYFPGGSAGLKFLSSTLTSSILRCFGR 423
           SVLQVLAL+YYA+SYFPGGS G+KFLSS LTSS+ +CFGR
Sbjct: 191 SVLQVLALAYYAVSYFPGGSTGMKFLSSALTSSVTKCFGR 230



 Score = 63.2 bits (152), Expect(2) = 7e-81
 Identities = 35/68 (51%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
 Frame = -2

Query: 1138 MHKTAQAWFS-GPSANADDLPKQSPSLLADWNAYAASTRATEEDDLDSSALGFDLEAAVR 962
            M K AQ WF+ G S+ +D+  K S SLLADWN+YA S  A  +D   +  +G DLE+AVR
Sbjct: 1    MQKMAQGWFTQGGSSGSDNQLKTSSSLLADWNSYAESQAA--DDSTFNLGIGLDLESAVR 58

Query: 961  TANDKVSG 938
            +AN+ VSG
Sbjct: 59   SANETVSG 66


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