BLASTX nr result

ID: Bupleurum21_contig00024135 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024135
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002463875.1| hypothetical protein SORBIDRAFT_01g008080 [S...   132   3e-29
ref|XP_003524350.1| PREDICTED: probable ATP-dependent RNA helica...    99   3e-19
ref|XP_002277625.2| PREDICTED: probable ATP-dependent RNA helica...    99   5e-19
emb|CBI15516.3| unnamed protein product [Vitis vinifera]               99   5e-19
emb|CAN67889.1| hypothetical protein VITISV_013607 [Vitis vinifera]    99   5e-19

>ref|XP_002463875.1| hypothetical protein SORBIDRAFT_01g008080 [Sorghum bicolor]
           gi|241917729|gb|EER90873.1| hypothetical protein
           SORBIDRAFT_01g008080 [Sorghum bicolor]
          Length = 1148

 Score =  132 bits (332), Expect = 3e-29
 Identities = 68/110 (61%), Positives = 79/110 (71%), Gaps = 24/110 (21%)
 Frame = -1

Query: 258 VDCGKAKETSYDALNNTPCLLPTWISKASARQ------------------------VQNA 151
           VDCGKAKET+YDALNNTPCLLP+WISKASARQ                        V+NA
Sbjct: 644 VDCGKAKETTYDALNNTPCLLPSWISKASARQIKSLQVGSIGEFLSAALQPPEPLAVENA 703

Query: 150 IEYLKTIGALDEYENLTVLGHKLSMLPVEPKLGKMLILGAIFNCLNPIMT 1
           +E+LK IGALD  ENLT LG  LSMLPV+PKLGKMLI+GA+F C++PI+T
Sbjct: 704 VEFLKMIGALDGNENLTDLGRYLSMLPVDPKLGKMLIMGAVFRCIDPILT 753


>ref|XP_003524350.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
           max]
          Length = 1180

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 49/54 (90%), Positives = 51/54 (94%)
 Frame = -1

Query: 162 VQNAIEYLKTIGALDEYENLTVLGHKLSMLPVEPKLGKMLILGAIFNCLNPIMT 1
           VQNAIEYLK IGALDE ENLTVLGHKL+MLPVEPKLGKMLILGAIF CL+PIMT
Sbjct: 742 VQNAIEYLKIIGALDENENLTVLGHKLAMLPVEPKLGKMLILGAIFKCLDPIMT 795


>ref|XP_002277625.2| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Vitis
           vinifera]
          Length = 1178

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 48/54 (88%), Positives = 50/54 (92%)
 Frame = -1

Query: 162 VQNAIEYLKTIGALDEYENLTVLGHKLSMLPVEPKLGKMLILGAIFNCLNPIMT 1
           VQNAIEYLKTIGALDE ENLTVLG  LSMLPVEPKLGKMLI G++FNCLNPIMT
Sbjct: 740 VQNAIEYLKTIGALDENENLTVLGRNLSMLPVEPKLGKMLIFGSLFNCLNPIMT 793



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 31/32 (96%), Positives = 32/32 (100%)
 Frame = -1

Query: 258 VDCGKAKETSYDALNNTPCLLPTWISKASARQ 163
           VDCGKAKETSYDALNNTPCLLP+WISKASARQ
Sbjct: 640 VDCGKAKETSYDALNNTPCLLPSWISKASARQ 671


>emb|CBI15516.3| unnamed protein product [Vitis vinifera]
          Length = 1057

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 48/54 (88%), Positives = 50/54 (92%)
 Frame = -1

Query: 162 VQNAIEYLKTIGALDEYENLTVLGHKLSMLPVEPKLGKMLILGAIFNCLNPIMT 1
           VQNAIEYLKTIGALDE ENLTVLG  LSMLPVEPKLGKMLI G++FNCLNPIMT
Sbjct: 619 VQNAIEYLKTIGALDENENLTVLGRNLSMLPVEPKLGKMLIFGSLFNCLNPIMT 672



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 31/32 (96%), Positives = 32/32 (100%)
 Frame = -1

Query: 258 VDCGKAKETSYDALNNTPCLLPTWISKASARQ 163
           VDCGKAKETSYDALNNTPCLLP+WISKASARQ
Sbjct: 519 VDCGKAKETSYDALNNTPCLLPSWISKASARQ 550


>emb|CAN67889.1| hypothetical protein VITISV_013607 [Vitis vinifera]
          Length = 558

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 48/54 (88%), Positives = 50/54 (92%)
 Frame = -1

Query: 162 VQNAIEYLKTIGALDEYENLTVLGHKLSMLPVEPKLGKMLILGAIFNCLNPIMT 1
           VQNAIEYLKTIGALDE ENLTVLG  LSMLPVEPKLGKMLI G++FNCLNPIMT
Sbjct: 120 VQNAIEYLKTIGALDENENLTVLGRNLSMLPVEPKLGKMLIFGSLFNCLNPIMT 173