BLASTX nr result

ID: Bupleurum21_contig00024131 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024131
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152913.1| PREDICTED: uncharacterized protein LOC101210...   122   4e-26
ref|XP_002316972.1| predicted protein [Populus trichocarpa] gi|2...   120   2e-25
ref|XP_003541876.1| PREDICTED: uncharacterized protein LOC100784...   112   3e-23
ref|XP_002280047.1| PREDICTED: uncharacterized protein LOC100253...   112   3e-23
ref|XP_002885395.1| hypothetical protein ARALYDRAFT_479594 [Arab...   109   2e-22

>ref|XP_004152913.1| PREDICTED: uncharacterized protein LOC101210881 [Cucumis sativus]
           gi|449521281|ref|XP_004167658.1| PREDICTED:
           uncharacterized LOC101210881 [Cucumis sativus]
          Length = 343

 Score =  122 bits (305), Expect = 4e-26
 Identities = 58/84 (69%), Positives = 72/84 (85%), Gaps = 4/84 (4%)
 Frame = -3

Query: 402 VRGIISRRKGVIFKCATNG----EEWNVFVEEEQGDLKSITKFRARPSIVEVENVLYNLL 235
           V+GI+++RKG+IFKC  NG    E WNV VEEE G+LK+++KF+ARPSI EVENVLYNL+
Sbjct: 260 VQGILNKRKGMIFKCVRNGVLSGELWNVLVEEEGGELKAVSKFKARPSITEVENVLYNLM 319

Query: 234 AINSPVTKSVKFFRDIVSNVTGKK 163
           A+NSP+TKS KF RD+VSNVTGKK
Sbjct: 320 AMNSPITKSAKFLRDLVSNVTGKK 343


>ref|XP_002316972.1| predicted protein [Populus trichocarpa] gi|222860037|gb|EEE97584.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score =  120 bits (300), Expect = 2e-25
 Identities = 57/84 (67%), Positives = 72/84 (85%), Gaps = 4/84 (4%)
 Frame = -3

Query: 402 VRGIISRRKGVIFKCA----TNGEEWNVFVEEEQGDLKSITKFRARPSIVEVENVLYNLL 235
           VRGI+S+RKGVIFKC      +GE+W V VEEE G+LK +++F+ARPSI EVENVLYNL+
Sbjct: 190 VRGILSKRKGVIFKCVRDGVVSGEKWTVLVEEEGGELKVVSRFKARPSIGEVENVLYNLM 249

Query: 234 AINSPVTKSVKFFRDIVSNVTGKK 163
           AINSP+TKS +FF+D+VSNVTG+K
Sbjct: 250 AINSPITKSARFFKDLVSNVTGRK 273


>ref|XP_003541876.1| PREDICTED: uncharacterized protein LOC100784062 [Glycine max]
          Length = 339

 Score =  112 bits (280), Expect = 3e-23
 Identities = 56/84 (66%), Positives = 69/84 (82%), Gaps = 4/84 (4%)
 Frame = -3

Query: 402 VRGIISRRKGVIFKCA----TNGEEWNVFVEEEQGDLKSITKFRARPSIVEVENVLYNLL 235
           VRGI+S+RKGVIFKC      +GE WNVFVEE Q +LK ++ F+ RP+IVEVENVLYNL+
Sbjct: 257 VRGILSKRKGVIFKCVRDGVVSGERWNVFVEEGQ-ELKVVSSFKVRPTIVEVENVLYNLM 315

Query: 234 AINSPVTKSVKFFRDIVSNVTGKK 163
           AINSP+TKS KF + +VSNVTG+K
Sbjct: 316 AINSPITKSAKFIQGLVSNVTGRK 339


>ref|XP_002280047.1| PREDICTED: uncharacterized protein LOC100253680 [Vitis vinifera]
          Length = 339

 Score =  112 bits (280), Expect = 3e-23
 Identities = 55/84 (65%), Positives = 70/84 (83%), Gaps = 4/84 (4%)
 Frame = -3

Query: 402 VRGIISRRKGVIFKCATNG----EEWNVFVEEEQGDLKSITKFRARPSIVEVENVLYNLL 235
           VRG++S+RKGV+FKC  +G    E+W V VEEE G+LK +++F+ARP+I EVENVLYNL+
Sbjct: 257 VRGVLSKRKGVVFKCVRDGVLSGEKWTVLVEEE-GELKVVSRFKARPAIGEVENVLYNLM 315

Query: 234 AINSPVTKSVKFFRDIVSNVTGKK 163
           AINSP+TKS KF R +VSNVTGKK
Sbjct: 316 AINSPITKSAKFLRGLVSNVTGKK 339


>ref|XP_002885395.1| hypothetical protein ARALYDRAFT_479594 [Arabidopsis lyrata subsp.
           lyrata] gi|297331235|gb|EFH61654.1| hypothetical protein
           ARALYDRAFT_479594 [Arabidopsis lyrata subsp. lyrata]
          Length = 337

 Score =  109 bits (273), Expect = 2e-22
 Identities = 53/86 (61%), Positives = 70/86 (81%), Gaps = 6/86 (6%)
 Frame = -3

Query: 402 VRGIISRRKGVIFKCA----TNGEEWNVFVEEEQGD--LKSITKFRARPSIVEVENVLYN 241
           VRG++S+RKGVIFKC      +GE WNV VEEE+G+  LK +++F +RPS+ EVE VLYN
Sbjct: 252 VRGVLSKRKGVIFKCVRDGVVSGERWNVLVEEEEGNGILKVVSQFNSRPSMEEVELVLYN 311

Query: 240 LLAINSPVTKSVKFFRDIVSNVTGKK 163
           L+A+NSP+TKS KF +D+VSN+TGKK
Sbjct: 312 LMAMNSPITKSAKFLKDLVSNITGKK 337


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