BLASTX nr result

ID: Bupleurum21_contig00024111 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024111
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515447.1| two-component system sensor histidine kinase...    62   4e-08
emb|CBM42564.1| putative B-type response regulator 22 [Populus x...    61   8e-08
ref|XP_002324320.1| type-b response regulator [Populus trichocar...    57   2e-06

>ref|XP_002515447.1| two-component system sensor histidine kinase/response regulator,
           putative [Ricinus communis] gi|223545391|gb|EEF46896.1|
           two-component system sensor histidine kinase/response
           regulator, putative [Ricinus communis]
          Length = 663

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 38/95 (40%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
 Frame = -3

Query: 295 SLNSGFSFNLTDIERHNDNWPNAFQSSDEQSNFYGGNDFFKHTS--PRIPRDNGLSMPMH 122
           SL+SGFS +L D  R NDNW +A QS+  QS  +  ND F+ T+  P   RD+  +M + 
Sbjct: 445 SLDSGFSSHLPDPGRCNDNWSSAVQSNGVQSTSFALNDCFRQTTLHPNNSRDSMSTMGLQ 504

Query: 121 IGSDPHDVSSFTLGPVLVPDDNIDLLQCQAPSASS 17
            G++  D+SS +  P+ + +   D LQCQ  S  S
Sbjct: 505 NGNNAPDISSISTLPIHLQESKAD-LQCQITSIRS 538


>emb|CBM42564.1| putative B-type response regulator 22 [Populus x canadensis]
          Length = 668

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
 Frame = -3

Query: 295 SLNSGFSFNLTDIERHNDNWPNAFQSSDEQSNFYGGNDFFKHTS--PRIPRDNGLSMPMH 122
           SLN G+S +  D  R NDNW NA QS+  QS+ +  ND+FK ++  P   RD   +M + 
Sbjct: 452 SLNPGYSSHFPDHGRRNDNWSNAVQSNGAQSDSFTLNDYFKQSTLHPSAIRDRMSTMALQ 511

Query: 121 IGSDPHDVSSFTLGPVLVPDDNIDL 47
             ++P DVSS +  P+ + D   DL
Sbjct: 512 SRNNPCDVSSVSTLPIHLQDSKADL 536


>ref|XP_002324320.1| type-b response regulator [Populus trichocarpa]
           gi|222865754|gb|EEF02885.1| type-b response regulator
           [Populus trichocarpa]
          Length = 661

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
 Frame = -3

Query: 295 SLNSGFSFNLTDIERHNDNWPNAFQSSDEQSNFYGGNDFFKHTS--PRIPRDNGLSMPMH 122
           SLN G+S +  D  R NDNW NA  S+  QS+ +  ND+FK ++  P   RD   +M + 
Sbjct: 444 SLNPGYSSHFPDHGRCNDNWSNAVPSNGAQSDSFTLNDYFKQSTLHPSAIRDRMSTMALQ 503

Query: 121 IGSDPHDVSSFTLGPVLVPDDNIDL 47
             ++P DVSS +  P+ + D   DL
Sbjct: 504 SRNNPCDVSSVSTLPMHLQDSKADL 528


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