BLASTX nr result

ID: Bupleurum21_contig00024109 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024109
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303963.1| predicted protein [Populus trichocarpa] gi|2...    79   5e-13
ref|XP_002299170.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11
ref|XP_003625960.1| DnaJ homolog subfamily C member [Medicago tr...    72   6e-11
ref|XP_004146256.1| PREDICTED: dnaJ homolog subfamily C member 2...    70   1e-10
ref|XP_002274720.2| PREDICTED: dnaJ homolog subfamily C member 2...    70   1e-10

>ref|XP_002303963.1| predicted protein [Populus trichocarpa] gi|222841395|gb|EEE78942.1|
           predicted protein [Populus trichocarpa]
          Length = 647

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 38/59 (64%), Positives = 50/59 (84%)
 Frame = -1

Query: 182 TVSGSVVSQHLLGLSEDDVERLCTSLDIEQLRNLCNKIEGEEGPGRAELLKEALGCNHD 6
           T+SGSV+SQ LL LSE DVE LC SLDIEQLR+LC++IEG+E   +A++L++A GC+HD
Sbjct: 369 TLSGSVLSQCLLNLSEADVENLCMSLDIEQLRSLCDRIEGKEVLEQAKVLRDACGCDHD 427


>ref|XP_002299170.1| predicted protein [Populus trichocarpa] gi|222846428|gb|EEE83975.1|
           predicted protein [Populus trichocarpa]
          Length = 647

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 34/59 (57%), Positives = 47/59 (79%)
 Frame = -1

Query: 182 TVSGSVVSQHLLGLSEDDVERLCTSLDIEQLRNLCNKIEGEEGPGRAELLKEALGCNHD 6
           T+S  V+ Q LL L EDDVE LC SLDIEQLR+LC+++EG+E   +A++L++A GC+HD
Sbjct: 369 TLSAPVLPQCLLNLGEDDVENLCMSLDIEQLRSLCDRMEGKEVVEQAKVLRDACGCDHD 427


>ref|XP_003625960.1| DnaJ homolog subfamily C member [Medicago truncatula]
           gi|355500975|gb|AES82178.1| DnaJ homolog subfamily C
           member [Medicago truncatula]
          Length = 653

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/59 (55%), Positives = 44/59 (74%)
 Frame = -1

Query: 182 TVSGSVVSQHLLGLSEDDVERLCTSLDIEQLRNLCNKIEGEEGPGRAELLKEALGCNHD 6
           T+S  ++SQH+L ++EDDVE LC S DIEQLR LC K+EG+E   +AE L++AL C  D
Sbjct: 369 TLSRPILSQHILDIAEDDVEELCMSFDIEQLRGLCEKMEGKEVLEQAEALRDALSCKKD 427


>ref|XP_004146256.1| PREDICTED: dnaJ homolog subfamily C member 2-like [Cucumis sativus]
           gi|449495541|ref|XP_004159872.1| PREDICTED: dnaJ homolog
           subfamily C member 2-like [Cucumis sativus]
          Length = 647

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 32/60 (53%), Positives = 47/60 (78%)
 Frame = -1

Query: 182 TVSGSVVSQHLLGLSEDDVERLCTSLDIEQLRNLCNKIEGEEGPGRAELLKEALGCNHDE 3
           T+SG  +SQ LL LS +DVE LC+SLDIE+LRN+C+K+EG++G   A++L++A  CN  +
Sbjct: 368 TLSGPAISQSLLDLSAEDVENLCSSLDIERLRNICDKMEGKKGMELAKVLRDAQECNSSD 427


>ref|XP_002274720.2| PREDICTED: dnaJ homolog subfamily C member 2-like [Vitis vinifera]
          Length = 711

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/59 (57%), Positives = 45/59 (76%)
 Frame = -1

Query: 182 TVSGSVVSQHLLGLSEDDVERLCTSLDIEQLRNLCNKIEGEEGPGRAELLKEALGCNHD 6
           T+S  V++Q+L  ++EDDVE LC SL+ EQLRNLC+KIEG EG  R +LL++A G N D
Sbjct: 432 TLSAPVLTQNLFNITEDDVESLCMSLETEQLRNLCDKIEGAEGLERGKLLRDARGGNTD 490


Top