BLASTX nr result
ID: Bupleurum21_contig00024098
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00024098
(1262 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002526570.1| brca1 associated ring domain, putative [Rici... 273 9e-71
ref|XP_003520608.1| PREDICTED: protein BREAST CANCER SUSCEPTIBIL... 253 7e-65
ref|XP_004163582.1| PREDICTED: protein BREAST CANCER SUSCEPTIBIL... 252 2e-64
ref|XP_004151994.1| PREDICTED: protein BREAST CANCER SUSCEPTIBIL... 252 2e-64
ref|XP_003625346.1| PHD finger protein 11-like protein [Medicago... 244 4e-62
>ref|XP_002526570.1| brca1 associated ring domain, putative [Ricinus communis]
gi|223534131|gb|EEF35848.1| brca1 associated ring domain,
putative [Ricinus communis]
Length = 744
Score = 273 bits (697), Expect = 9e-71
Identities = 171/480 (35%), Positives = 235/480 (48%), Gaps = 86/480 (17%)
Frame = +1
Query: 79 DHMFCNCCIKTSTR--SECPSCKSKFVEQEMRPAPFIGNIVNIYRNLDATSLDTLFKPVS 252
DH+FCN C+ T+ SECP CK ++V +++RP PFI N+V IYR+LD+ +F+
Sbjct: 46 DHIFCNSCLHERTKFASECPVCKDQYVGRDLRPLPFIENMVAIYRSLDSAFCANMFQSSC 105
Query: 253 CDAAKKLNLSPVSIKLSSGDGTKKELNQVAADGNSCSGTFFPLSDKNCSGDMLSGSAKD- 429
D K P S D KE + + NS SG L N + S+++
Sbjct: 106 SDTGKISEQCPTSAGADCNDKLSKE--SIGQEDNSSSGRSMYLLKGNQLAQVPLNSSQNG 163
Query: 430 -------------------ENVVIGNAVKSAVTSSAQDKNIELPGL-------------D 513
E ++G K + S+ + L D
Sbjct: 164 ARNIDMADKSNVQRVTKDGEYEIVGGDAKQNINSTPISSQVRAGRLQECGLLRISTNQAD 223
Query: 514 TLVFSAKGVGMDFQSPGNDGRVQHEEARKDEIDMNQMGELSPGCTHIMGNMDDNSS--DP 687
L + D +SP ND Q +++ + ++ + SP D +S +
Sbjct: 224 QLSTGSPPSFGDVKSPENDSCDQGDDSPTN-YQAIRLVKRSPDDMTSQERHDGFASGTEG 282
Query: 688 GSSRDAKRQKKSD--------------------------------------------LEG 735
G+ RD KR KK D LE
Sbjct: 283 GNLRDPKRHKKLDYGQLNRDTNRSSPISSQTENPGACCSQLGHKFVPPHIDGQPPALLED 342
Query: 736 GGV----CAFCHSSEVTNETGEMIHYANGKLIVGGMKPLSNGIHVHKICIEWTPQVYYEG 903
V C FC SS + +TG M HY NGKL+ G N +HVH+ICIEW PQVY+
Sbjct: 343 SSVAKIMCGFCQSSRTSKDTGPMFHYVNGKLVEGDEASGPNALHVHRICIEWAPQVYFVD 402
Query: 904 DNIKNLESELARAAKLKCSRCGLKGAGLGCYMKSCRRSYHVPCAIKTSDCRWDFDDFLMT 1083
+ +KNL++ELAR +KLKCS+CGLKGA LGC+ KSCRRSYHV CA++ + CRWD+D+FL+
Sbjct: 403 ETVKNLKAELARGSKLKCSKCGLKGAALGCFQKSCRRSYHVTCAMEIAGCRWDYDNFLVL 462
Query: 1084 CPVHNAVKFPSE-KSKSRKAALQEAKPVAAPIIPKQVNFWSTSQTGPKEWVFCGSALSTE 1260
CP H++V+FP E KSKS+K +L E V + P+Q NFW+ S TG KEWVFCGSALS+E
Sbjct: 463 CPSHSSVRFPDEKKSKSKKHSL-ERHHVPTQVPPQQPNFWAESATGAKEWVFCGSALSSE 521
>ref|XP_003520608.1| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Glycine
max]
Length = 678
Score = 253 bits (646), Expect = 7e-65
Identities = 159/438 (36%), Positives = 223/438 (50%), Gaps = 44/438 (10%)
Frame = +1
Query: 79 DHMFCNCCIKT--STRSECPSCKSKFVEQEMRPAPFIGNIVNIYRNLDATSLDTLFKPVS 252
+H+FCN C+ + SEC CK+ + + ++R PF+ N+V IYR+LDAT +LF+ S
Sbjct: 43 NHLFCNSCLADCITAGSECAVCKTTYAQTDVRHIPFVENVVAIYRSLDATFCASLFQSRS 102
Query: 253 CDAAKKLN-----LSPVSIKLSSGDGTKK--ELNQVAADGNSCSGTFFPLSDKNCSGDML 411
+ L L+ S L +G + LN+V S + + DK ++
Sbjct: 103 SGGGRVLEPCQTILNSTSSSLKTGKLPRNLTNLNEVGVGQTFKSKSV--VHDKAEELELS 160
Query: 412 SGSAKD-------------ENVVIGNAVKSAVTSSAQDKNIELPGLDTLVFSAKGVGMDF 552
G K E + + VT SA D P DT D
Sbjct: 161 CGRGKPNPMQSSQMGLGGREQCGVMEMDVNQVTQSAPDSP---PFCDTKGSDNDCSDQDS 217
Query: 553 QSPGNDGRVQHEEARKDEIDMNQMGELSPGCTHIMGNMDDNSS---DPGSSRDAKRQKKS 723
+ P GR+++ + + E MG + SS G +RD KRQK
Sbjct: 218 EHPLPPGRLENSSLNRASAGNGNLKER-------MGQLRSESSVSETEGLARDLKRQKNL 270
Query: 724 DLEGGG-------------------VCAFCHSSEVTNETGEMIHYANGKLIVGGMKPLSN 846
D + G +C+FC SS+++ TG M+HYANG L+ G N
Sbjct: 271 DFKPGKDPGAPLPTNASIDLCPIGRICSFCQSSKISEVTGPMLHYANGNLVTGDAAMKPN 330
Query: 847 GIHVHKICIEWTPQVYYEGDNIKNLESELARAAKLKCSRCGLKGAGLGCYMKSCRRSYHV 1026
+ VH+ICI+W PQVY++G+ +KNL++E+AR AKLKCS+C LKGA LGCY+KSCRR+YHV
Sbjct: 331 VVPVHRICIDWAPQVYFDGEVVKNLKAEVARGAKLKCSKCNLKGAALGCYVKSCRRTYHV 390
Query: 1027 PCAIKTSDCRWDFDDFLMTCPVHNAVKFPSEKSKSRKAALQEAKPVAAPIIPKQVNFWST 1206
PCA+ SDCRWD +DFL+ CPVH+ VKFP EK +S+K A Q+ P + + N
Sbjct: 391 PCAMDISDCRWDHEDFLLLCPVHSNVKFPCEKIRSKKQATQK-HPTLSHLPSHHSNPLEA 449
Query: 1207 SQTGPKEWVFCGSALSTE 1260
S + VFCGSALS E
Sbjct: 450 SHDDDVKLVFCGSALSNE 467
>ref|XP_004163582.1| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Cucumis
sativus]
Length = 679
Score = 252 bits (643), Expect = 2e-64
Identities = 148/427 (34%), Positives = 224/427 (52%), Gaps = 33/427 (7%)
Frame = +1
Query: 79 DHMFCNCCIKTSTR--SECPSCKSKFVEQEMRPAPFIGNIVNIYRNLDATSLDTLFKPVS 252
+H+FC C+ + + S CP CK+ FV+++MRPAPF+ +V+IYR+LDAT + K VS
Sbjct: 46 NHLFCKSCMPFAAQIGSVCPLCKAGFVDRDMRPAPFMDKMVSIYRSLDATFSTNMSKLVS 105
Query: 253 CDAAKKLNLSPVSIKLSSGDGTKKELNQVAADGNS-------------------CSGTFF 375
D + S +S KE + +S C
Sbjct: 106 TDVGAAVEQSRFGQSVSYVANNCKEFEGCSMPVDSKRQHLGIEGRKGEHGRHEDCVMPPV 165
Query: 376 PLSDKNCSGD-------MLSGSAKDENVVIGNAVKS---AVTSSAQDKNIELPGLDTLVF 525
+D+ SG +S + DE G+ S +V +SA DK ++L +
Sbjct: 166 SQTDQLSSGSPPSFGDGKVSDDSSDEYRGHGSKNTSDWISVITSADDKKLQLSKCTSSAS 225
Query: 526 SAKGVGMDFQSPG-NDGRVQHEEARKDEIDMNQMGELSPGCTHIMGN-MDDNSSDPGSSR 699
+G D + N G+++ R D PG + + M+ S +S
Sbjct: 226 EEEGHLRDLKRQKLNYGQLKF---RISSADQTHPPVSEPGNSETSNSGMEHKSQVTNASS 282
Query: 700 DAKRQKKSDLEGGGVCAFCHSSEVTNETGEMIHYANGKLIVGGMKPLSNGIHVHKICIEW 879
+ CAFC SS+VT +TG ++HY NG+L+ G N IHVHK+C+EW
Sbjct: 283 MPLADADDTIVRNVKCAFCQSSKVTEDTGAVLHYMNGRLVDGVEAASPNVIHVHKLCVEW 342
Query: 880 TPQVYYEGDNIKNLESELARAAKLKCSRCGLKGAGLGCYMKSCRRSYHVPCAIKTSDCRW 1059
PQ Y++GD++ NL++E+AR +KLKCS+CGLKGA LGCY++SC++SYHVPCA++ +CRW
Sbjct: 343 APQAYFQGDDVHNLKAEVARGSKLKCSKCGLKGAALGCYLRSCQKSYHVPCALEIDECRW 402
Query: 1060 DFDDFLMTCPVHNAVKFPSEKSKSRKAALQEAKPVAAPIIPKQVNFWSTSQTGPKEWVFC 1239
D D+FL+ CP H + +FP E+SK RK + + + K ++ W+++ G +W FC
Sbjct: 403 DMDNFLVLCPSHTSARFPDERSKPRKNNF-DVFNIVSSRNQKDLSNWASASDGVNKWTFC 461
Query: 1240 GSALSTE 1260
GSALS E
Sbjct: 462 GSALSAE 468
>ref|XP_004151994.1| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Cucumis
sativus]
Length = 679
Score = 252 bits (643), Expect = 2e-64
Identities = 148/427 (34%), Positives = 224/427 (52%), Gaps = 33/427 (7%)
Frame = +1
Query: 79 DHMFCNCCIKTSTR--SECPSCKSKFVEQEMRPAPFIGNIVNIYRNLDATSLDTLFKPVS 252
+H+FC C+ + + S CP CK+ FV+++MRPAPF+ +V+IYR+LDAT + K VS
Sbjct: 46 NHLFCKSCMPFAAQIGSVCPLCKAGFVDRDMRPAPFMDKMVSIYRSLDATFSTNMSKLVS 105
Query: 253 CDAAKKLNLSPVSIKLSSGDGTKKELNQVAADGNS-------------------CSGTFF 375
D + S +S KE + +S C
Sbjct: 106 TDVGAAVEQSRFGQSVSYVANNCKEFEGCSMPVDSKRQHLGIEGRKGEHGRHEDCVMPPV 165
Query: 376 PLSDKNCSGD-------MLSGSAKDENVVIGNAVKS---AVTSSAQDKNIELPGLDTLVF 525
+D+ SG +S + DE G+ S +V +SA DK ++L +
Sbjct: 166 SQTDQLSSGSPPSFGDGKVSDDSSDEYRGHGSKNTSDWISVITSADDKKLQLSKCTSSAS 225
Query: 526 SAKGVGMDFQSPG-NDGRVQHEEARKDEIDMNQMGELSPGCTHIMGN-MDDNSSDPGSSR 699
+G D + N G+++ R D PG + + M+ S +S
Sbjct: 226 EEEGHLRDLKRQKLNYGQLKF---RISSADQTHPPVSEPGNSETSNSGMEHKSQVTNASS 282
Query: 700 DAKRQKKSDLEGGGVCAFCHSSEVTNETGEMIHYANGKLIVGGMKPLSNGIHVHKICIEW 879
+ CAFC SS+VT +TG ++HY NG+L+ G N IHVHK+C+EW
Sbjct: 283 MPLADADDTIVRNVKCAFCQSSKVTEDTGAVLHYMNGRLVDGVEAASPNVIHVHKLCVEW 342
Query: 880 TPQVYYEGDNIKNLESELARAAKLKCSRCGLKGAGLGCYMKSCRRSYHVPCAIKTSDCRW 1059
PQ Y++GD++ NL++E+AR +KLKCS+CGLKGA LGCY++SC++SYHVPCA++ +CRW
Sbjct: 343 APQAYFQGDDVHNLKAEVARGSKLKCSKCGLKGAALGCYLRSCQKSYHVPCALEIDECRW 402
Query: 1060 DFDDFLMTCPVHNAVKFPSEKSKSRKAALQEAKPVAAPIIPKQVNFWSTSQTGPKEWVFC 1239
D D+FL+ CP H + +FP E+SK RK + + + K ++ W+++ G +W FC
Sbjct: 403 DMDNFLVLCPSHTSARFPDERSKPRKNNF-DVFNIVSSRNQKDLSNWASASDGVNKWTFC 461
Query: 1240 GSALSTE 1260
GSALS E
Sbjct: 462 GSALSAE 468
>ref|XP_003625346.1| PHD finger protein 11-like protein [Medicago truncatula]
gi|355500361|gb|AES81564.1| PHD finger protein 11-like
protein [Medicago truncatula]
Length = 687
Score = 244 bits (622), Expect = 4e-62
Identities = 150/448 (33%), Positives = 218/448 (48%), Gaps = 54/448 (12%)
Frame = +1
Query: 79 DHMFCNCCI--KTSTRSECPSCKSKFVEQEMRPAPFIGNIVNIYRNLDATSLDTLFKPVS 252
+H+FC+ C+ TS RSEC C +K ++++R PF+ +IV IY++LDAT F+ S
Sbjct: 48 NHLFCSSCLADSTSIRSECALCNTKCSQKDIRHLPFVESIVTIYKSLDATFCANAFQQRS 107
Query: 253 CDAAKKLNLSPVSIKLSSGDGTKKELNQVAADGNSCSGTFFPLSDKNCSGDMLSGSAKDE 432
D + L + + K L NSC + + SG ++G AK+
Sbjct: 108 SDNTRVLEQCQTLHNSAFSNKVDKVLQ------NSCMSNEVGVGKNHQSGIKMNGKAKEV 161
Query: 433 NVVIGNAVKSAVTSSAQDKNIEL---------PGLDTLVFSAKGVGMDFQSPGNDGRVQH 585
+ + + N+ P DT ++ + P + GR +
Sbjct: 162 EMSCKRGADNHIAEKPDSMNLNQATQSEPDSPPFCDTKGSDNGCSDLNSEKPLSLGRSES 221
Query: 586 EEARKDEIDMNQMGELSPGCTHIMGNMDDNSSDPGSSRDAKRQK---------------- 717
++ G L H S + +RD KRQK
Sbjct: 222 SSFKRSST--TGKGNLKERMPHFWSE-SSASENEDLTRDLKRQKNLTNEDGIVQQSTSYH 278
Query: 718 ------------KSDLEGGG---------------VCAFCHSSEVTNETGEMIHYANGKL 816
KSD + G +C+FC SS+++ TG M+HYA+G
Sbjct: 279 NKLVDSRCDLEIKSDKDTGALVPSNAPSDLYPSTSICSFCQSSKISEATGSMLHYASGIS 338
Query: 817 IVGGMKPLSNGIHVHKICIEWTPQVYYEGDNIKNLESELARAAKLKCSRCGLKGAGLGCY 996
+ G N +HVHK+CI+W PQVY+ G+ +KNL++E+AR AKLKC++CG KGA LGCY
Sbjct: 339 VTGEAAMEPNVVHVHKVCIDWAPQVYFVGETVKNLKAEVARGAKLKCTKCGKKGAALGCY 398
Query: 997 MKSCRRSYHVPCAIKTSDCRWDFDDFLMTCPVHNAVKFPSEKSKSRKAALQEAKPVAAPI 1176
+KSCRR+YHVPCA+ S CRWD D+L+ CP H+ VKFP+EKS K A Q+ PV++ +
Sbjct: 399 VKSCRRTYHVPCAMDISACRWDHVDYLLLCPSHSNVKFPNEKSNLDKQATQK-HPVSSHL 457
Query: 1177 IPKQVNFWSTSQTGPKEWVFCGSALSTE 1260
+Q N Q K+ VFCGSALS E
Sbjct: 458 PSQQSNQLGAVQGDGKKMVFCGSALSNE 485