BLASTX nr result

ID: Bupleurum21_contig00024094 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024094
         (564 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75850.1| hypothetical protein VITISV_041106 [Vitis vinifera]   155   3e-36
ref|XP_002279848.1| PREDICTED: uncharacterized protein LOC100249...   153   2e-35
ref|XP_002279728.1| PREDICTED: uncharacterized protein LOC100259...   143   2e-32
ref|XP_002317536.1| predicted protein [Populus trichocarpa] gi|2...   143   2e-32
gb|ABK93857.1| unknown [Populus trichocarpa]                          143   2e-32

>emb|CAN75850.1| hypothetical protein VITISV_041106 [Vitis vinifera]
          Length = 225

 Score =  155 bits (393), Expect = 3e-36
 Identities = 76/145 (52%), Positives = 104/145 (71%)
 Frame = +1

Query: 1   PAHVSVVNGSVKPIVEDAMAVDWIGENLDXXXXXXXXXXMRLTFMKVKEGVGEKESDEVL 180
           P+H+SVV  SV PI ED MAVDW+ +N+           MRLTFM++ EG+G++E ++VL
Sbjct: 83  PSHMSVVKESVLPICEDVMAVDWVADNJSGPVVPRPGSAMRLTFMRLNEGLGDEEKEKVL 142

Query: 181 EVIGGIKEMFPAIDQLSFGKNFSPERAKGYSIASLAVFPSLKELDELDSNSNSELANSQK 360
             +G IK+   ++DQ+++G+NFSP RAKG+SIAS+A+FP L EL+ LD  SN E+   QK
Sbjct: 143 GAVGEIKDCLGSLDQMTYGENFSPARAKGFSIASIAIFPGLNELEALD--SNPEVVQLQK 200

Query: 361 AKARDLLESVLVLDYVIKPQHSASL 435
            K RDLL+ V+VLDYV+ P  SASL
Sbjct: 201 DKVRDLLDRVIVLDYVVPPPQSASL 225


>ref|XP_002279848.1| PREDICTED: uncharacterized protein LOC100249118 [Vitis vinifera]
          Length = 261

 Score =  153 bits (386), Expect = 2e-35
 Identities = 75/145 (51%), Positives = 103/145 (71%)
 Frame = +1

Query: 1   PAHVSVVNGSVKPIVEDAMAVDWIGENLDXXXXXXXXXXMRLTFMKVKEGVGEKESDEVL 180
           P+H+SVV   V PI ED MAVDW+ +N+           MRLTFM++ EG+G++E ++VL
Sbjct: 119 PSHMSVVKELVLPICEDVMAVDWVADNISGPVVPRPGSAMRLTFMRLNEGLGDEEKEKVL 178

Query: 181 EVIGGIKEMFPAIDQLSFGKNFSPERAKGYSIASLAVFPSLKELDELDSNSNSELANSQK 360
             +G IK+   ++DQ+++G+NFSP RAKG+SIAS+A+FP L EL+ LD  SN E+   QK
Sbjct: 179 GAVGEIKDCLGSLDQMTYGENFSPARAKGFSIASIAIFPGLNELEALD--SNPEVVQLQK 236

Query: 361 AKARDLLESVLVLDYVIKPQHSASL 435
            K RDLL+ V+VLDYV+ P  SASL
Sbjct: 237 DKVRDLLDRVIVLDYVVPPPQSASL 261


>ref|XP_002279728.1| PREDICTED: uncharacterized protein LOC100259336 isoform 1 [Vitis
           vinifera] gi|359484443|ref|XP_003633110.1| PREDICTED:
           uncharacterized protein LOC100259336 isoform 2 [Vitis
           vinifera]
          Length = 223

 Score =  143 bits (360), Expect = 2e-32
 Identities = 72/145 (49%), Positives = 100/145 (68%)
 Frame = +1

Query: 1   PAHVSVVNGSVKPIVEDAMAVDWIGENLDXXXXXXXXXXMRLTFMKVKEGVGEKESDEVL 180
           P+H+ VV     PI+ED MAVDW+ ++L           MRLT MK+K G+G++E  ++L
Sbjct: 80  PSHLRVVKELGSPILEDLMAVDWVADDLSGPVVPRPGSAMRLTIMKLKGGLGDEEKAKIL 139

Query: 181 EVIGGIKEMFPAIDQLSFGKNFSPERAKGYSIASLAVFPSLKELDELDSNSNSELANSQK 360
             IG IK+   +++Q+++G+NFSP RAKG+SIAS+A+FP L EL+ LD  SN EL   Q+
Sbjct: 140 GAIGDIKDCLGSLNQMTYGENFSPARAKGFSIASVAIFPGLNELEALD--SNPELVQLQR 197

Query: 361 AKARDLLESVLVLDYVIKPQHSASL 435
            K RDLL+ V+VLDYV+ P  SASL
Sbjct: 198 DKVRDLLDRVIVLDYVVPPPQSASL 222


>ref|XP_002317536.1| predicted protein [Populus trichocarpa] gi|222860601|gb|EEE98148.1|
           predicted protein [Populus trichocarpa]
          Length = 212

 Score =  143 bits (360), Expect = 2e-32
 Identities = 78/139 (56%), Positives = 98/139 (70%), Gaps = 2/139 (1%)
 Frame = +1

Query: 1   PAHVSVVNGSVKPIVEDAMAVDWIGENLDXXXXXXXXXX--MRLTFMKVKEGVGEKESDE 174
           P HV VV  SV PI +D MAVDW+  +L+            +RLTF+K+KEG+G++  DE
Sbjct: 73  PTHVQVVKESVLPICDDIMAVDWVTGDLNGGDSLVPPSGSAIRLTFLKLKEGLGDEVKDE 132

Query: 175 VLEVIGGIKEMFPAIDQLSFGKNFSPERAKGYSIASLAVFPSLKELDELDSNSNSELANS 354
           +L VI GIK+ F  ID +S G+NFSP RAKGYSIASLAVF  L EL+ +D  S+ ELAN 
Sbjct: 133 ILGVIQGIKDTFGGIDHISCGENFSPARAKGYSIASLAVFRGLSELEAVD--SDKELANL 190

Query: 355 QKAKARDLLESVLVLDYVI 411
           +KAK RD LESV+VLDYV+
Sbjct: 191 EKAKVRDYLESVMVLDYVV 209


>gb|ABK93857.1| unknown [Populus trichocarpa]
          Length = 224

 Score =  143 bits (360), Expect = 2e-32
 Identities = 78/139 (56%), Positives = 98/139 (70%), Gaps = 2/139 (1%)
 Frame = +1

Query: 1   PAHVSVVNGSVKPIVEDAMAVDWIGENLDXXXXXXXXXX--MRLTFMKVKEGVGEKESDE 174
           P HV VV  SV PI +D MAVDW+  +L+            +RLTF+K+KEG+G++  DE
Sbjct: 83  PTHVQVVKESVLPICDDIMAVDWVTGDLNGGDSLVPPSGSAIRLTFLKLKEGLGDEVKDE 142

Query: 175 VLEVIGGIKEMFPAIDQLSFGKNFSPERAKGYSIASLAVFPSLKELDELDSNSNSELANS 354
           +L VI GIK+ F  ID +S G+NFSP RAKGYSIASLAVF  L EL+ +D  S+ ELAN 
Sbjct: 143 ILGVIQGIKDTFGGIDHISCGENFSPARAKGYSIASLAVFRGLSELEAVD--SDKELANL 200

Query: 355 QKAKARDLLESVLVLDYVI 411
           +KAK RD LESV+VLDYV+
Sbjct: 201 EKAKVRDYLESVMVLDYVV 219


Top