BLASTX nr result

ID: Bupleurum21_contig00024079 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024079
         (622 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271972.2| PREDICTED: uncharacterized protein LOC100261...   105   3e-23
ref|XP_004150127.1| PREDICTED: uncharacterized protein LOC101221...    87   2e-17
ref|XP_004168323.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    87   2e-17
ref|XP_002264447.2| PREDICTED: uncharacterized protein LOC100244...    94   3e-17
emb|CAN77727.1| hypothetical protein VITISV_024318 [Vitis vinifera]    94   3e-17

>ref|XP_002271972.2| PREDICTED: uncharacterized protein LOC100261347 [Vitis vinifera]
          Length = 1199

 Score =  105 bits (261), Expect(2) = 3e-23
 Identities = 51/115 (44%), Positives = 75/115 (65%), Gaps = 1/115 (0%)
 Frame = +1

Query: 280 RSCTHCSYKICLTCSREVCEGCLQGVEEDEIMQLIDPGEEYLHG-VGKYNVSSEKGGPLE 456
           RSC +CSY +CL C RE+ +G LQG EE+ I+ +  PG  YLHG   ++  SS +   L 
Sbjct: 635 RSCPNCSYDLCLICCREIRDGHLQGGEEEVIVHVDSPGLGYLHGDKSRFPESSRRKRKLN 694

Query: 457 NPNGSRGENFVKSASEWRLDKDGSIPCPPKSMHGCGEGMLKLKHILGENQLSSLL 621
            P  +  ++  KS S W  +K+GSIPCPPK++ GCG+G+L+L+ +L EN +  L+
Sbjct: 695 FPANASPKDHAKSMSGWEANKNGSIPCPPKNLGGCGQGLLELRCMLEENFVLGLI 749



 Score = 28.9 bits (63), Expect(2) = 3e-23
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +3

Query: 81  LSLSRLKIEAAESELNKHMNCDNCKAYILD 170
           LS S LKI+      N+   CDNC+  I+D
Sbjct: 603 LSPSELKIQRVVCNKNERAYCDNCRTSIVD 632


>ref|XP_004150127.1| PREDICTED: uncharacterized protein LOC101221956 [Cucumis sativus]
          Length = 955

 Score = 87.4 bits (215), Expect(2) = 2e-17
 Identities = 43/108 (39%), Positives = 64/108 (59%)
 Frame = +1

Query: 280 RSCTHCSYKICLTCSREVCEGCLQGVEEDEIMQLIDPGEEYLHGVGKYNVSSEKGGPLEN 459
           R+C  CS+ +C+ C RE+ EG +Q  ++ +I+  I+ G EYLHG G   V   K   L  
Sbjct: 364 RTCVSCSFDLCINCCREIREGDMQCCDKKKIISYINRGFEYLHGEGLRKVKRGKATVLAK 423

Query: 460 PNGSRGENFVKSASEWRLDKDGSIPCPPKSMHGCGEGMLKLKHILGEN 603
              S   + V+S   WR +KDG IPCPP ++ GCG G L+L+ +L ++
Sbjct: 424 ---SCPTDDVESGFIWRAEKDGRIPCPPSNLGGCGNGFLELRCLLKDS 468



 Score = 27.3 bits (59), Expect(2) = 2e-17
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 81  LSLSRLKIEAAESELNKHMNCDNCKAYILD 170
           L L  LK++  + E N+ M CD C+  I D
Sbjct: 332 LPLEDLKVKKVKCEDNERMYCDICRTSIFD 361


>ref|XP_004168323.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101221956
           [Cucumis sativus]
          Length = 930

 Score = 87.4 bits (215), Expect(2) = 2e-17
 Identities = 43/108 (39%), Positives = 64/108 (59%)
 Frame = +1

Query: 280 RSCTHCSYKICLTCSREVCEGCLQGVEEDEIMQLIDPGEEYLHGVGKYNVSSEKGGPLEN 459
           R+C  CS+ +C+ C RE+ EG +Q  ++ +I+  I+ G EYLHG G   V   K   L  
Sbjct: 364 RTCVSCSFDLCINCCREIREGDMQCCDKKKIISYINRGFEYLHGEGLRKVKRGKATVLAK 423

Query: 460 PNGSRGENFVKSASEWRLDKDGSIPCPPKSMHGCGEGMLKLKHILGEN 603
              S   + V+S   WR +KDG IPCPP ++ GCG G L+L+ +L ++
Sbjct: 424 ---SCPTDDVESGFIWRAEKDGRIPCPPSNLGGCGNGFLELRCLLKDS 468



 Score = 27.3 bits (59), Expect(2) = 2e-17
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 81  LSLSRLKIEAAESELNKHMNCDNCKAYILD 170
           L L  LK++  + E N+ M CD C+  I D
Sbjct: 332 LPLEDLKVKKVKCEDNERMYCDICRTSIFD 361


>ref|XP_002264447.2| PREDICTED: uncharacterized protein LOC100244450 [Vitis vinifera]
          Length = 896

 Score = 93.6 bits (231), Expect = 3e-17
 Identities = 47/113 (41%), Positives = 67/113 (59%)
 Frame = +1

Query: 280 RSCTHCSYKICLTCSREVCEGCLQGVEEDEIMQLIDPGEEYLHGVGKYNVSSEKGGPLEN 459
           R+C +CSY +CLTC RE+  G LQG  ++ +MQ  D G+ YLHG GK ++ S + G    
Sbjct: 315 RNCPNCSYDLCLTCCREIRNGSLQGGIDEIVMQYFDRGKAYLHG-GKPHMPSVQKGESNF 373

Query: 460 PNGSRGENFVKSASEWRLDKDGSIPCPPKSMHGCGEGMLKLKHILGENQLSSL 618
              S  ++   +  EW++ ++G IPC PK M GCG G L LK +  E  +S L
Sbjct: 374 CVSSSSKDPGSTICEWKVKENGDIPCAPKEMGGCGHGRLDLKCMFSETWVSEL 426


>emb|CAN77727.1| hypothetical protein VITISV_024318 [Vitis vinifera]
          Length = 969

 Score = 93.6 bits (231), Expect = 3e-17
 Identities = 47/113 (41%), Positives = 67/113 (59%)
 Frame = +1

Query: 280 RSCTHCSYKICLTCSREVCEGCLQGVEEDEIMQLIDPGEEYLHGVGKYNVSSEKGGPLEN 459
           R+C +CSY +CLTC RE+  G LQG  ++ +MQ  D G+ YLHG GK ++ S + G    
Sbjct: 314 RNCPNCSYDLCLTCCREIRNGSLQGGIDEIVMQYFDRGKAYLHG-GKPHMPSVQKGESNF 372

Query: 460 PNGSRGENFVKSASEWRLDKDGSIPCPPKSMHGCGEGMLKLKHILGENQLSSL 618
              S  ++   +  EW++ ++G IPC PK M GCG G L LK +  E  +S L
Sbjct: 373 CVSSSSKDPGSTICEWKVKENGDIPCAPKEMGGCGHGRLDLKCMFSETWVSEL 425


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