BLASTX nr result

ID: Bupleurum21_contig00024059 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024059
         (614 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77667.1| hypothetical protein VITISV_038105 [Vitis vinifera]    85   9e-15
ref|XP_002316085.1| predicted protein [Populus trichocarpa] gi|2...    85   1e-14
ref|XP_002274047.2| PREDICTED: uncharacterized protein LOC100267...    84   2e-14
ref|XP_002311343.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_003618729.1| hypothetical protein MTR_6g015240 [Medicago ...    80   4e-13

>emb|CAN77667.1| hypothetical protein VITISV_038105 [Vitis vinifera]
          Length = 286

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 53/133 (39%), Positives = 78/133 (58%), Gaps = 2/133 (1%)
 Frame = +2

Query: 212 QNPSPVHIPVLQVMERHGDVASDVIPASVFDSKPSTPTDWSVASNDSLFSIQIGNLSFSR 391
           QN S    P +Q M R G    + IP+SVF SKP+TP +WSVAS++SLFSI +GN SFS 
Sbjct: 68  QNGSTTQSPPIQTMGRSGGYDPNRIPSSVFASKPTTPLEWSVASSESLFSIHVGNASFST 127

Query: 392 DQFLSMSEDKFDELFKSGELRKSAELI-RSRLPPLS-SVEKQHNKDKLDRGENNERTGVE 565
           +         F +L KSGEL KS ELI  S LPP++ + +   +   +++G     +GV 
Sbjct: 128 E---------FAQLGKSGELTKSQELIFPSGLPPVTEAADMDRSSQDMEKG-----SGVR 173

Query: 566 HETSKDSSDKYHD 604
             +S+ + + + +
Sbjct: 174 ETSSQTTKEVFRE 186


>ref|XP_002316085.1| predicted protein [Populus trichocarpa] gi|222865125|gb|EEF02256.1|
           predicted protein [Populus trichocarpa]
          Length = 369

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 57/138 (41%), Positives = 76/138 (55%), Gaps = 5/138 (3%)
 Frame = +2

Query: 215 NPSPVHIPVLQVMERHGDVASDVIPASVFD-SKPSTPTDWSVASNDSLFSIQIGNLSFSR 391
           N SP   P LQVMER G      IP+S+F+ +K + P DWSVASN+SLFSI  GN SFSR
Sbjct: 207 NMSPKQSPPLQVMERPGGYDPLRIPSSIFEKNKGTAPMDWSVASNESLFSIHAGNNSFSR 266

Query: 392 DQFLSMSEDKFDELFKSGELRKSAELIR-SRLPPLSSVEKQHNKDKLD---RGENNERTG 559
           D  L +      +L KSG++ KS ELI  S LPP   V   +     D   + +     G
Sbjct: 267 DHVLLLG-----DLGKSGDITKSGELIMFSPLPPREMVATDNQSSVPDVETKKQKGGANG 321

Query: 560 VEHETSKDSSDKYHDQLK 613
           +   T KD ++  +++ K
Sbjct: 322 IADNTIKDPAEYQNEENK 339


>ref|XP_002274047.2| PREDICTED: uncharacterized protein LOC100267943 [Vitis vinifera]
          Length = 323

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 54/122 (44%), Positives = 71/122 (58%), Gaps = 1/122 (0%)
 Frame = +2

Query: 221 SPVHIPVLQVMERHGDVASDVIPASVFD-SKPSTPTDWSVASNDSLFSIQIGNLSFSRDQ 397
           SP   P +Q MER GD     IP+SVF  S+ +TP +WSVASN+SLFSI +GN SFSR+ 
Sbjct: 105 SPTQSPPVQSMERSGDDEPYRIPSSVFARSQSTTPLEWSVASNESLFSIHVGNSSFSREH 164

Query: 398 FLSMSEDKFDELFKSGELRKSAELIRSRLPPLSSVEKQHNKDKLDRGENNERTGVEHETS 577
              +  D      KSGEL KS ELI     P + +    +K  +D G++ E T + +E  
Sbjct: 165 IFMLGGDH----TKSGELTKSGELIVFSSSPPARLGDNVSK-SVDTGKDLEMTAIANEPI 219

Query: 578 KD 583
           KD
Sbjct: 220 KD 221


>ref|XP_002311343.1| predicted protein [Populus trichocarpa] gi|222851163|gb|EEE88710.1|
           predicted protein [Populus trichocarpa]
          Length = 426

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 52/131 (39%), Positives = 73/131 (55%), Gaps = 5/131 (3%)
 Frame = +2

Query: 215 NPSPVHIPVLQVMERHGDVASDVIPASVFD-SKPSTPTDWSVASNDSLFSIQIGNLSFSR 391
           N SP   P LQVMER G      IP+S+F+ +K   P DWSVASN+SLFSI +GN SFSR
Sbjct: 193 NMSPTQSPPLQVMERPGGYDPFRIPSSIFERNKGPAPMDWSVASNESLFSIHVGNNSFSR 252

Query: 392 DQFLSMSEDKFDELFKSGELRKSAELIRSRLPP---LSSVEKQHNKDKLDR-GENNERTG 559
           D  L +      +L  SG++++S ELI    PP   + + + Q +   L+   +     G
Sbjct: 253 DHVLLLG-----DLGLSGDIKQSGELIMFSPPPPKAMVATDNQSSDPALETYKQKGGANG 307

Query: 560 VEHETSKDSSD 592
           +   T KD ++
Sbjct: 308 ISDNTIKDPAE 318


>ref|XP_003618729.1| hypothetical protein MTR_6g015240 [Medicago truncatula]
           gi|355493744|gb|AES74947.1| hypothetical protein
           MTR_6g015240 [Medicago truncatula]
          Length = 442

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 47/104 (45%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
 Frame = +2

Query: 284 IPASVFDSKPSTPTDWSVASNDSLFSIQIGNLSFSRDQFLSMSEDKFDELFKSGELRKSA 463
           IP+SVF SKP++P +WSV SN+SLFS+ +GN SFS+DQF + S        KSGE  K++
Sbjct: 100 IPSSVFASKPTSPMEWSVQSNESLFSLHLGNYSFSKDQFFAFSS-------KSGEFPKNS 152

Query: 464 ELI--RSRLPPLSSVEKQHNKDKLDRGENNERTGVEHETSKDSS 589
           + I   + LPP+  V   HN DK + G+        H  S DSS
Sbjct: 153 DFIGTSTTLPPVQEV--NHNNDKNEVGKE------RHSMSPDSS 188


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