BLASTX nr result

ID: Bupleurum21_contig00024056 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024056
         (1270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278240.2| PREDICTED: uncharacterized protein LOC100255...   246   9e-63
ref|XP_002522945.1| conserved hypothetical protein [Ricinus comm...   241   4e-61
ref|XP_002317597.1| predicted protein [Populus trichocarpa] gi|2...   231   4e-58
emb|CAN63914.1| hypothetical protein VITISV_004851 [Vitis vinifera]   218   2e-54
emb|CBI26632.3| unnamed protein product [Vitis vinifera]              215   2e-53

>ref|XP_002278240.2| PREDICTED: uncharacterized protein LOC100255618 [Vitis vinifera]
          Length = 470

 Score =  246 bits (628), Expect = 9e-63
 Identities = 164/407 (40%), Positives = 216/407 (53%), Gaps = 54/407 (13%)
 Frame = +1

Query: 40   DPKVSDAPRTLKRLRRGPTAREVPPIARKREPVVSWCNVXXXXXXXXXXXXXXL---PSA 210
            DP+VS AP  LKRLRRGP          +RE   +WCNV                  PS 
Sbjct: 55   DPEVS-AP-ALKRLRRGPGR------VHRRELAEAWCNVDEEIEEFSSQEGFRRDEHPST 106

Query: 211  QHQSVCRSSKLSLPGHGVLSSQSSK-----KRKQVTNGSSSANVDRSSNNILFPKLIVSP 375
            Q+ SVC SSK  L   GVL+S+S+      KR+Q +N  +S++++ SS+ ++FPKL +SP
Sbjct: 107  QYHSVCSSSKFPLRASGVLTSRSASHRKAGKREQASNHPASSSLETSSSKLMFPKLTISP 166

Query: 376  LRKFQLIXXXXXXXXXXXXXCANTTANKTGSSLNARQ----------------------- 486
            LR+FQL+              AN  A  T  S   RQ                       
Sbjct: 167  LRRFQLLDSDDDDPSVIED--ANQEAKNTHPSAKVRQSNHRQYSCASEDKSTKTFVSMPQ 224

Query: 487  -------FRLDKNLPIPTPAFDEVFEELSRSAKDTNIR---------NTSKVCSQTKTNI 618
                   F  ++++ IPTPA DEV EE  RS KD N+          +  K   Q K N 
Sbjct: 225  NVDLWKDFWPNRSVGIPTPALDEVCEEYFRSVKDKNVTVKLGSDGCISNEKRSYQNKNNR 284

Query: 619  NNV-HKVNLGDPLPPAHSYFFHDDLRIQNIVRTRLPYFFPLLTDDIRESDQPNASAIDYM 795
              V H+++L DPLPPAH YFFH D RIQ +VR+RLP F PL       + Q  AS IDYM
Sbjct: 285  KTVQHQLDLADPLPPAHRYFFHADPRIQKLVRSRLPNFSPLGVVS-NTNMQHGASVIDYM 343

Query: 796  GQFSHGESSTARKKN------ASTRSRKQSRKTNAEEVTQGTQGWVDPKSTMKIPKNASK 957
             QFSHGE+S  +         ++ ++RK +RK NA+E    +  WV+PKS   IPK A K
Sbjct: 344  SQFSHGEASKKQVNQDVSIGRSTMQARKNARKFNADEALNASGSWVNPKSCASIPKKAGK 403

Query: 958  RRVQADGQSTQSAGHWYTDSNGKRVYVTKTGKELTGQIAYRHYKKES 1098
             +V A+GQS   A  WYT  +G++VYVTK+G+ELTG +AYRHYKK++
Sbjct: 404  GQVHANGQS---ASRWYTSPDGRKVYVTKSGQELTGSMAYRHYKKDN 447


>ref|XP_002522945.1| conserved hypothetical protein [Ricinus communis]
            gi|223537757|gb|EEF39375.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 477

 Score =  241 bits (614), Expect = 4e-61
 Identities = 161/414 (38%), Positives = 223/414 (53%), Gaps = 49/414 (11%)
 Frame = +1

Query: 10   DDDDF--ESPGQDPKVS-DAPRTLKRLRRGPTAREVPPIARKREPVVSWCNVXXXXXXXX 180
            DDDDF  E    DP+    +PR  KRLRRGP   E     R++E V  +C+         
Sbjct: 47   DDDDFGLEVVDSDPETGPSSPRVFKRLRRGPAVEESRMEKREQEKV--FCDNGDDEIEEF 104

Query: 181  XXXXXXL----PSAQHQSVCRSSKLSLPGHGV-LSSQSSK-----KRKQVTNGSSSANVD 330
                  +    PSA++ SVC SSK+ L G GV L++QSSK     K+++ ++  SS+ + 
Sbjct: 105  SSQEDFIRDAYPSAEYNSVCSSSKIPLHGCGVSLTTQSSKQLKEKKKERASDAPSSSCLG 164

Query: 331  RSSNNILFPKLIVSPLRKFQLIXXXXXXXXXXXXXCA---------------------NT 447
              +N ++FP L +SPLR+FQLI                                    N 
Sbjct: 165  TGNNGLIFPNLTISPLRRFQLIDSDSEEPSTRNDVSRKISGTDLSSKERQPNSCEKKRNP 224

Query: 448  TANKTGSSLNARQFRLDKNLPIPTPAFDEVFEELSRSAKDTNI---------RNTSKVCS 600
            +A K  S    + F   K+  +PTP  DEV EE  +S +DTN          ++    C 
Sbjct: 225  SAEKHQSEDLWKDFCPKKSFHVPTPVLDEVCEEYFQSLRDTNSAKKLGTNLPKDGGVGCH 284

Query: 601  QTKTNINNVHKV-NLGDPLPPAHSYFFHDDLRIQNIVRTRLPYFFPLLTDDIRESDQPNA 777
                 I    +  NL DPLPPA++YF HDD RIQ++VR+RLP F PL   + RE+ QP+ 
Sbjct: 285  LDANTIAGFEQSWNLADPLPPAYNYFCHDDSRIQSLVRSRLPNFSPLCIINNRENHQPSE 344

Query: 778  SAIDYMGQFSHGESS----TARKKNA-STRSRKQSRKTNAEEVTQGTQGWVDPKSTMKIP 942
              I+YM QF +GE+S    T R  N  STR R +S+K+  +E    +Q W+DPK +  IP
Sbjct: 345  PVINYMSQF-NGEASKKGGTCRNNNKDSTRGRSKSKKSIVKEALPASQVWIDPKRSASIP 403

Query: 943  KNASKRRVQADGQSTQSAGHWYTDSNGKRVYVTKTGKELTGQIAYRHYKKESKG 1104
            K+A KRRV A+G   Q+AGHWYT   G++VYV+++G+ELTGQ+AYRHY+K S G
Sbjct: 404  KDAGKRRVHANG---QAAGHWYTSPEGRKVYVSRSGQELTGQMAYRHYRKASSG 454


>ref|XP_002317597.1| predicted protein [Populus trichocarpa] gi|222860662|gb|EEE98209.1|
            predicted protein [Populus trichocarpa]
          Length = 497

 Score =  231 bits (588), Expect = 4e-58
 Identities = 155/406 (38%), Positives = 208/406 (51%), Gaps = 51/406 (12%)
 Frame = +1

Query: 40   DPKVSDAP-RTLKRLRRGPTAREVPPIARKREPVVSWCN-----VXXXXXXXXXXXXXXL 201
            DP+    P R L+RLRRGP  ++     RK E     C+     +               
Sbjct: 72   DPEPGPGPTRVLRRLRRGPATQKSK--VRKVELEGFCCDHGDDDIEEFSSQEDLGVRDAK 129

Query: 202  PSAQHQSVCRSSKLSLPGHGVLSSQS-----SKKRKQVTNGSSSANVDRSSNNILFPKLI 366
             S Q  SVC SSK+ L G GVL+SQS       K++Q +  S S++++   + ++FPKL 
Sbjct: 130  VSTQFTSVCSSSKVPLKGCGVLTSQSPSLLKGNKKEQASIASVSSSLETGHSGLMFPKLT 189

Query: 367  VSPLRKFQLIXXXXXXXXXXXXXCANTTANKTGSSLNARQ-------------------- 486
            +SPLR+FQLI                T   KT SS   +Q                    
Sbjct: 190  ISPLRRFQLIDSDSDEASISADASGKT--QKTDSSSKKQQPTTSERKNKTLLGEHRNEDL 247

Query: 487  ---FRLDKNLPIPTPAFDEVFEELSRSAKDTNIRNTSKVCSQTKTN------------IN 621
               F   K+ P+ TP  DE+  E  +S +D N     K+ S  +T             ++
Sbjct: 248  WKDFCPIKSYPVQTPVLDEMCNEYFQSLQD-NKNKAHKLQSNLQTGDSTRFHQDPNSMVD 306

Query: 622  NVHKVNLGDPLPPAHSYFFHDDLRIQNIVRTRLPYFFPLLTDDIRESDQPNASAIDYMGQ 801
                 NL DPLPPAH YFFH+DLRIQ +V +RLPYFFPL   + + +     SAIDYM Q
Sbjct: 307  FQQCWNLADPLPPAHHYFFHEDLRIQRLVHSRLPYFFPLGIVNNKGNQLITESAIDYMSQ 366

Query: 802  FSHGES-----STARKKNASTRSRKQSRKTNAEEVTQGTQGWVDPKSTMKIPKNASKRRV 966
            F+   S          +  STR R +S+K+NA EV+  ++GWVDPKS+  IPK+A KRRV
Sbjct: 367  FNREASRKQGTQRTNSEKGSTRGRNKSKKSNAGEVSLASEGWVDPKSSTAIPKDAGKRRV 426

Query: 967  QADGQSTQSAGHWYTDSNGKRVYVTKTGKELTGQIAYRHYKKESKG 1104
             A   S Q  GHWYT   G++VY++K G+EL+GQIAYRHYKK+S G
Sbjct: 427  HA---SDQGDGHWYTSPEGRKVYISKNGQELSGQIAYRHYKKDSGG 469


>emb|CAN63914.1| hypothetical protein VITISV_004851 [Vitis vinifera]
          Length = 510

 Score =  218 bits (556), Expect = 2e-54
 Identities = 138/340 (40%), Positives = 186/340 (54%), Gaps = 51/340 (15%)
 Frame = +1

Query: 232  SSKLSLPGHGVLSSQSSK-----KRKQVTNGSSSANVDRSSNNILFPKLIVSPLRKFQLI 396
            SSK  L   GVL+S+S+      KR+Q +N  +S++++ SS+ ++FPKL +SPLR+FQL+
Sbjct: 154  SSKFPLRASGVLTSRSASHRKAGKREQASNHPASSSLETSSSKLMFPKLTISPLRRFQLL 213

Query: 397  XXXXXXXXXXXXXCANTTANKTGSSLNARQ------------------------------ 486
                          AN  A  T  S   RQ                              
Sbjct: 214  DSDDDDPSVIED--ANQEAKNTHPSAKVRQSNHRQYSCASEDKSTKTFVSMPQNVDLWKD 271

Query: 487  FRLDKNLPIPTPAFDEVFEELSRSAKDTNIR---------NTSKVCSQTKTNINNV-HKV 636
            F  ++++ IPTPA DEV EE  RS KD N+          +  K   Q K N   V H++
Sbjct: 272  FWPNRSVGIPTPALDEVCEEYFRSVKDKNVTVKLGSDGCISNEKRSYQNKNNRKTVQHQL 331

Query: 637  NLGDPLPPAHSYFFHDDLRIQNIVRTRLPYFFPLLTDDIRESDQPNASAIDYMGQFSHGE 816
            +L DPLPPAH YFFH D RIQ +VR+RLP F PL       + Q  AS IDYM QFSHGE
Sbjct: 332  DLADPLPPAHRYFFHADPRIQKLVRSRLPNFSPLGVVS-NTNMQHGASVIDYMSQFSHGE 390

Query: 817  SSTARKKN------ASTRSRKQSRKTNAEEVTQGTQGWVDPKSTMKIPKNASKRRVQADG 978
            +S  +         ++ ++RK +RK NA+E    +  WV+PKS   IPK A K +V A+G
Sbjct: 391  ASKKQVNQDVSIGRSTMQARKNARKFNADEALNASGSWVNPKSCASIPKKAGKGQVHANG 450

Query: 979  QSTQSAGHWYTDSNGKRVYVTKTGKELTGQIAYRHYKKES 1098
            QS   A  WYT  +G++VYVTK+G+ELTG +AYRHYKK++
Sbjct: 451  QS---ASRWYTSPDGRKVYVTKSGQELTGSMAYRHYKKDN 487


>emb|CBI26632.3| unnamed protein product [Vitis vinifera]
          Length = 421

 Score =  215 bits (547), Expect = 2e-53
 Identities = 151/378 (39%), Positives = 198/378 (52%), Gaps = 25/378 (6%)
 Frame = +1

Query: 40   DPKVSDAPRTLKRLRRGPTAREVPPIARKREPVVSWCNVXXXXXXXXXXXXXXL---PSA 210
            DP+VS AP  LKRLRRGP          +RE   +WCNV                  PS 
Sbjct: 55   DPEVS-AP-ALKRLRRGPGR------VHRRELAEAWCNVDEEIEEFSSQEGFRRDEHPST 106

Query: 211  QHQSVCRSSKLSLPGHGVLSSQSSKKRKQVTNGSSSANVDRSSNNILFPKLIVSPLRKFQ 390
            Q+ SVC SSK  L   GVL+S+S+  RK   N         + N     K+  S  R++ 
Sbjct: 107  QYHSVCSSSKFPLRASGVLTSRSASHRKADAN-------QEAKNTHPSAKVRQSNHRQYS 159

Query: 391  LIXXXXXXXXXXXXXCANTT-ANKTGSSLNA-----RQFRLDKNLPIPTPAFDEVFEELS 552
                           CA+   + KT  S+       + F  ++++ IPTPA DEV EE  
Sbjct: 160  ---------------CASEDKSTKTFVSMPQNVDLWKDFWPNRSVGIPTPALDEVCEEYF 204

Query: 553  RSAKDTNIR---------NTSKVCSQTKTNINNV-HKVNLGDPLPPAHSYFFHDDLRIQN 702
            RS KD N+          +  K   Q K N   V H+++L DPLPPAH YFFH D RIQ 
Sbjct: 205  RSVKDKNVTVKLGSDGCISNEKRSYQNKNNRKTVQHQLDLADPLPPAHRYFFHADPRIQK 264

Query: 703  IVRTRLPYFFPLLTDDIRESDQPNASAIDYMGQFSHGESSTARKKN------ASTRSRKQ 864
            +VR+RLP F PL       + Q  AS IDYM QFSHGE+S  +         ++ ++RK 
Sbjct: 265  LVRSRLPNFSPLGVVS-NTNMQHGASVIDYMSQFSHGEASKKQVNQDVSIGRSTMQARKN 323

Query: 865  SRKTNAEEVTQGTQGWVDPKSTMKIPKNASKRRVQADGQSTQSAGHWYTDSNGKRVYVTK 1044
            +RK NA+E    +  WV+PKS   IPK A K +V A+GQS   A  WYT  +G++VYVTK
Sbjct: 324  ARKFNADEALNASGSWVNPKSCASIPKKAGKGQVHANGQS---ASRWYTSPDGRKVYVTK 380

Query: 1045 TGKELTGQIAYRHYKKES 1098
            +G+ELTG +AYRHYKK++
Sbjct: 381  SGQELTGSMAYRHYKKDN 398


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