BLASTX nr result

ID: Bupleurum21_contig00024050 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024050
         (727 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271972.2| PREDICTED: uncharacterized protein LOC100261...   248   7e-64
ref|XP_002264447.2| PREDICTED: uncharacterized protein LOC100244...   236   5e-60
emb|CBI29042.3| unnamed protein product [Vitis vinifera]              226   3e-57
emb|CAN77727.1| hypothetical protein VITISV_024318 [Vitis vinifera]   207   2e-51
ref|XP_002520404.1| conserved hypothetical protein [Ricinus comm...   200   2e-49

>ref|XP_002271972.2| PREDICTED: uncharacterized protein LOC100261347 [Vitis vinifera]
          Length = 1199

 Score =  248 bits (634), Expect = 7e-64
 Identities = 116/244 (47%), Positives = 167/244 (68%), Gaps = 4/244 (1%)
 Frame = +3

Query: 3    DNDKIRYAKYMLPMLLPFVKHFMEEQLMEKQIEAKIKGVPVSEIKVQKTDCEPDERIFCN 182
            D +K ++++Y+L  ++PF+K F +EQ++EK+IEAKI+G+  SE+K+Q+  C  +ER +C+
Sbjct: 565  DEEKFKHSRYLLQAVVPFLKQFNQEQMLEKEIEAKIQGLSPSELKIQRVVCNKNERAYCD 624

Query: 183  NCKTSIADFHRSCPSCCYDLCLICCREIRSGCLQGGKVEETVQLIDPGLSYLHGGEPVI- 359
            NC+TSI DFHRSCP+C YDLCLICCREIR G LQGG+ E  V +  PGL YLHG +    
Sbjct: 625  NCRTSIVDFHRSCPNCSYDLCLICCREIRDGHLQGGEEEVIVHVDSPGLGYLHGDKSRFP 684

Query: 360  SSLENKITMNSTAKTGERDHIKSAYEWNLNEDGTIACPSEDMGGCGQGILELRSILSEDW 539
             S   K  +N  A    +DH KS   W  N++G+I CP +++GGCGQG+LELR +L E++
Sbjct: 685  ESSRRKRKLNFPANASPKDHAKSMSGWEANKNGSIPCPPKNLGGCGQGLLELRCMLEENF 744

Query: 540  VPNLLVDAENLAKTHELKLNVPITPEDCCFCSNTL---DSEKQNSMKAASRKDSDDNYLY 710
            V  L+++AE +A +++L +++   P+ CC C N     D++     K ASR DS DN LY
Sbjct: 745  VLGLIMEAEEIASSNKL-MDISGNPQQCCSCLNFADDNDTDNSKLRKGASRDDSSDNNLY 803

Query: 711  CPTA 722
            CP A
Sbjct: 804  CPKA 807


>ref|XP_002264447.2| PREDICTED: uncharacterized protein LOC100244450 [Vitis vinifera]
          Length = 896

 Score =  236 bits (601), Expect = 5e-60
 Identities = 114/240 (47%), Positives = 161/240 (67%), Gaps = 2/240 (0%)
 Frame = +3

Query: 6   NDKIRYAKYMLPMLLPFVKHFMEEQLMEKQIEAKIKGVPVSEIKVQKTDCEPDERIFCNN 185
           +DKI+++KY++ +LLPF++ F  EQ ME++IEAKI+G+   EI+VQ+     DER++CNN
Sbjct: 246 DDKIKHSKYLVKVLLPFLEQFDHEQEMEREIEAKIQGLSPPEIQVQQAVLREDERVYCNN 305

Query: 186 CKTSIADFHRSCPSCCYDLCLICCREIRSGCLQGGKVEETVQLIDPGLSYLHGGEPVISS 365
           C+TSI DFHR+CP+C YDLCL CCREIR+G LQGG  E  +Q  D G +YLHGG+P + S
Sbjct: 306 CRTSIVDFHRNCPNCSYDLCLTCCREIRNGSLQGGIDEIVMQYFDRGKAYLHGGKPHMPS 365

Query: 366 LENKITMNSTAKTGERDHIKSAYEWNLNEDGTIACPSEDMGGCGQGILELRSILSEDWVP 545
           ++ K   N    +  +D   +  EW + E+G I C  ++MGGCG G L+L+ + SE WV 
Sbjct: 366 VQ-KGESNFCVSSSSKDPGSTICEWKVKENGDIPCAPKEMGGCGHGRLDLKCMFSETWVS 424

Query: 546 NLLVDAENLAKTHELK--LNVPITPEDCCFCSNTLDSEKQNSMKAASRKDSDDNYLYCPT 719
            L   AE L KTH+L   L +P     C   ++ +D + +   KAA+R+DS DNYLYCP+
Sbjct: 425 ELKEKAEGLVKTHKLTDVLGIPACSCSCFKLNSEIDFDNKKLRKAAAREDSFDNYLYCPS 484


>emb|CBI29042.3| unnamed protein product [Vitis vinifera]
          Length = 1019

 Score =  226 bits (577), Expect = 3e-57
 Identities = 108/243 (44%), Positives = 157/243 (64%), Gaps = 3/243 (1%)
 Frame = +3

Query: 3    DNDKIRYAKYMLPMLLPFVKHFMEEQLMEKQIEAKIKGVPVSEIKVQKTDCEPDERIFCN 182
            D +K ++++Y+L  ++PF+K F +EQ++EK+IEAKI+G+  SE+K+Q+  C  +ER +C+
Sbjct: 403  DEEKFKHSRYLLQAVVPFLKQFNQEQMLEKEIEAKIQGLSPSELKIQRVVCNKNERAYCD 462

Query: 183  NCKTSIADFHRSCPSCCYDLCLICCREIRSGCLQGGKVEETVQLIDPGLSYLHGGEPVIS 362
            NC+TSI DFHRSCP+C YDLCLICCREIR G LQGG+ E                     
Sbjct: 463  NCRTSIVDFHRSCPNCSYDLCLICCREIRDGHLQGGEEE--------------------- 501

Query: 363  SLENKITMNSTAKTGERDHIKSAYEWNLNEDGTIACPSEDMGGCGQGILELRSILSEDWV 542
            S   K  +N  A    +DH KS   W  N++G+I CP +++GGCGQG+LELR +L E++V
Sbjct: 502  SSRRKRKLNFPANASPKDHAKSMSGWEANKNGSIPCPPKNLGGCGQGLLELRCMLEENFV 561

Query: 543  PNLLVDAENLAKTHELKLNVPITPEDCCFCSNTL---DSEKQNSMKAASRKDSDDNYLYC 713
              L+++AE +A +++L +++   P+ CC C N     D++     K ASR DS DN LYC
Sbjct: 562  LGLIMEAEEIASSNKL-MDISGNPQQCCSCLNFADDNDTDNSKLRKGASRDDSSDNNLYC 620

Query: 714  PTA 722
            P A
Sbjct: 621  PKA 623


>emb|CAN77727.1| hypothetical protein VITISV_024318 [Vitis vinifera]
          Length = 969

 Score =  207 bits (527), Expect = 2e-51
 Identities = 105/238 (44%), Positives = 146/238 (61%)
 Frame = +3

Query: 6   NDKIRYAKYMLPMLLPFVKHFMEEQLMEKQIEAKIKGVPVSEIKVQKTDCEPDERIFCNN 185
           +DKI+++KY++ +LLPF++ F  EQ ME++IEAKI+G+   EI+VQ+     DER++CNN
Sbjct: 245 DDKIKHSKYLVKVLLPFLEQFDHEQEMEREIEAKIQGLSPPEIQVQQAVLREDERVYCNN 304

Query: 186 CKTSIADFHRSCPSCCYDLCLICCREIRSGCLQGGKVEETVQLIDPGLSYLHGGEPVISS 365
           C+TSI DFHR+CP+C YDLCL CCREIR+G LQGG  E  +Q  D G +YLHGG+P + S
Sbjct: 305 CRTSIVDFHRNCPNCSYDLCLTCCREIRNGSLQGGIDEIVMQYFDRGKAYLHGGKPHMPS 364

Query: 366 LENKITMNSTAKTGERDHIKSAYEWNLNEDGTIACPSEDMGGCGQGILELRSILSEDWVP 545
           ++ K   N    +  +D   +  EW + E+G I C  ++MGGCG G L+L+ + SE WV 
Sbjct: 365 VQ-KGESNFCVSSSSKDPGSTICEWKVKENGDIPCAPKEMGGCGHGRLDLKCMFSETWVS 423

Query: 546 NLLVDAENLAKTHELKLNVPITPEDCCFCSNTLDSEKQNSMKAASRKDSDDNYLYCPT 719
            L   AE                               +  KAA+R+DS DNYLYCP+
Sbjct: 424 ELKEKAEG------------------------------SWRKAAAREDSFDNYLYCPS 451


>ref|XP_002520404.1| conserved hypothetical protein [Ricinus communis]
            gi|223540389|gb|EEF41959.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1099

 Score =  200 bits (509), Expect = 2e-49
 Identities = 106/241 (43%), Positives = 150/241 (62%), Gaps = 2/241 (0%)
 Frame = +3

Query: 6    NDKI-RYAKYMLPMLLPFVKHFMEEQLMEKQIEAKIKGVPVSEIKVQKTDCEPDERIFCN 182
            NDKI  + KY+L  LLPF++   EEQLMEK++EA+ +G+   ++++Q  +C P+ER+FC+
Sbjct: 406  NDKILMHCKYLLQALLPFLRQLDEEQLMEKKVEARAQGLSSIDLEIQNANCPPNERMFCD 465

Query: 183  NCKTSIADFHRSCPSCCYDLCLICCREIRSGCLQGGKVEETVQLIDPGLSYLHGGEPVIS 362
            NC+TSI D+HRSC +C  DLCLICC+EIR G LQGG  E  ++  + G  YLHG E  + 
Sbjct: 466  NCRTSIFDYHRSCSNCFSDLCLICCQEIRGGHLQGGGQEVVMEYTNRGFEYLHGAEGTVI 525

Query: 363  SLENKITMNSTAKTGERDHIKSAYEWNLNEDGTIACPSEDMGGCGQGILELRSILSEDWV 542
            S +     N +      D + S   W  NEDG+I C       CG G LEL+ +  E+WV
Sbjct: 526  SPDEVPLENIS-----EDLLGSKLGWKANEDGSIVC------RCGFGNLELKCLFPENWV 574

Query: 543  PNLLVDAENLAKTHEL-KLNVPITPEDCCFCSNTLDSEKQNSMKAASRKDSDDNYLYCPT 719
             +LL  AE++A+ +EL  L +P+    C      +D    + +KAASR+DSDDN+LY P 
Sbjct: 575  SDLLKKAEDVARGYELDMLKMPLVRCACFNSIGNVDVGNSHLLKAASREDSDDNFLYYPR 634

Query: 720  A 722
            A
Sbjct: 635  A 635


Top