BLASTX nr result

ID: Bupleurum21_contig00024049 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024049
         (619 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]   119   4e-25
gb|ABH07899.1| putative polyprotein [Solanum lycopersicum]            117   2e-24
gb|ACB45081.1| putative polyprotein [Solanum habrochaites]            116   3e-24
gb|ACB45089.1| putative polyprotein [Solanum habrochaites]            110   2e-22
ref|XP_003545301.1| PREDICTED: uncharacterized protein LOC100820...   108   6e-22

>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
          Length = 1813

 Score =  119 bits (298), Expect = 4e-25
 Identities = 90/260 (34%), Positives = 118/260 (45%), Gaps = 55/260 (21%)
 Frame = +3

Query: 3    RLLDLKTNKEFVSRDVKFYEDIFPFD------------------------PQAIS----- 95
            ++LDL+T K  VSRDV F E+IFPF                         PQ IS     
Sbjct: 1027 KVLDLQTQKISVSRDVFFRENIFPFHSSSSQSQQHSPSLPLPLPISFDSTPQPISLPRFS 1086

Query: 96   -QFMQXXXXXXXXXXXXGQVTVDEEYVSNENLLRXXXXXFLRSPSPERVHSPSRVD---- 260
                                T   E +S+E++          SPSP  + SP  V     
Sbjct: 1087 PSSTPPLSHHNPVSSPPSSNTDVPEPLSHESVASPLPS----SPSPSSLSSPPSVPLVPS 1142

Query: 261  --SADANTEENRVRRSTRLRGPPEWHKDYAVNQAQSVTHT------------AVHPSF-- 392
              SA + T E  +RRSTR   PP WH DY ++   + + T            + H SF  
Sbjct: 1143 NTSAPSPTHEPPLRRSTRHIQPPAWHHDYVMSAQLNHSSTQSSSRQGTRYPLSSHLSFFR 1202

Query: 393  -----NCFLATLTSTTDPSSFDEAIQHTRWVSAMNDELEALERNKTWSVTELPQGKTAID 557
                   FLA LT+ T+PSSF++A    RW  AM+ EL+ALERN TW +  LP G   I 
Sbjct: 1203 FSPHHRAFLALLTAQTEPSSFEQADCDPRWRQAMSTELQALERNNTWEMVPLPPGHKPIG 1262

Query: 558  CKWLFKTKFRPDGTIERYKS 617
            C+W++K K+  DGTIERYK+
Sbjct: 1263 CRWVYKIKYHSDGTIERYKA 1282


>gb|ABH07899.1| putative polyprotein [Solanum lycopersicum]
          Length = 1428

 Score =  117 bits (293), Expect = 2e-24
 Identities = 71/224 (31%), Positives = 108/224 (48%), Gaps = 20/224 (8%)
 Frame = +3

Query: 6    LLDLKTNKEFVSRDVKFYEDIFPFDPQAISQFMQXXXXXXXXXXXXGQVTVDEE-----Y 170
            LLD+ + K  V+RDV F+E+IFPF  +  SQ                  T++ E     +
Sbjct: 764  LLDIHSTKVHVNRDVVFHEEIFPFAKER-SQLDPLGDVHGSPLEKAENQTIEAEIDNSVH 822

Query: 171  VSNENLLRXXXXXFLRSPSPERVHSPSRVDSADANTE------ENRVRRSTRLRGPPEWH 332
                 +          S S  ++  PS  +    NT       ++ VRRS+R    P W 
Sbjct: 823  AETSMVHEDSQGNETESYSENQMSRPSTTEEVSENTHAIPSHVDSYVRRSSRNIKEPMWM 882

Query: 333  KDYAVNQAQSVT---------HTAVHPSFNCFLATLTSTTDPSSFDEAIQHTRWVSAMND 485
            KDY + +  S T         +  + P    FL+ L+  T+P +F +A Q  RW+ AM  
Sbjct: 883  KDYTITKGHSSTKHPMASYLNYEKLKPECRSFLSKLSEYTEPKNFKQASQDERWIQAMKQ 942

Query: 486  ELEALERNKTWSVTELPQGKTAIDCKWLFKTKFRPDGTIERYKS 617
            E++ALE N TW V ELP+G  A+  KW++K K++ +G IER+K+
Sbjct: 943  EIKALEENNTWQVVELPEGMHAVGSKWIYKVKYKANGEIERFKA 986


>gb|ACB45081.1| putative polyprotein [Solanum habrochaites]
          Length = 559

 Score =  116 bits (291), Expect = 3e-24
 Identities = 69/228 (30%), Positives = 107/228 (46%), Gaps = 23/228 (10%)
 Frame = +3

Query: 3   RLLDLKTNKEFVSRDVKFYEDIFPFDPQAISQF-----------MQXXXXXXXXXXXXGQ 149
           +L DL+    FVSRDV F E  FPF  Q                +              Q
Sbjct: 178 KLYDLQNKVFFVSRDVVFNEFTFPFQTQCFDDIQDSVSSIESLDLPVRFDDLEDYHQQDQ 237

Query: 150 VTVDEEYVSNENLLRXXXXXFLRSPSPERVHSPSRVDSADANTEENRVRRSTRLRGPPEW 329
            T+D+   + +N           + +PE  H   +    D+    NR R+STR   PP W
Sbjct: 238 PTIDDPIDNADNAF---------ANAPEDHHQQDQPTMDDSFLSSNR-RQSTRTSRPPIW 287

Query: 330 HKDYAV------------NQAQSVTHTAVHPSFNCFLATLTSTTDPSSFDEAIQHTRWVS 473
            KD+              +   ++ +  + P + C +A L+  T+P  + +A +  RW++
Sbjct: 288 QKDFVTTFKSRSRSNCLYSLENNIDYKNLSPYYQCCIANLSVDTEPKFYHQAAKDKRWIA 347

Query: 474 AMNDELEALERNKTWSVTELPQGKTAIDCKWLFKTKFRPDGTIERYKS 617
           AM +E++ALE NKTW V  LP GK AI CKW++K K++ +G +ER+K+
Sbjct: 348 AMKEEIQALEENKTWEVVTLPIGKKAIGCKWVYKIKYKANGEVERFKA 395


>gb|ACB45089.1| putative polyprotein [Solanum habrochaites]
          Length = 849

 Score =  110 bits (276), Expect = 2e-22
 Identities = 72/229 (31%), Positives = 106/229 (46%), Gaps = 24/229 (10%)
 Frame = +3

Query: 3    RLLDLKTNKEFVSRDVKFYEDIFPF----DPQAISQFMQXXXXXXXXXXXXGQVTVDEEY 170
            +L DL T   F+SRDV F ED +PF    D    S F +                  + +
Sbjct: 526  KLYDLSTQTFFISRDVTFREDQYPFQHIQDESCDSSFFENP----------------DMF 569

Query: 171  VSNENLLRXXXXXFLRSPSPERVH----SPSRVDSADANTEENRVRRSTRLRGPPEWHKD 338
            V +++        F+ SP          SPS +      +    +RRSTR   PP W  D
Sbjct: 570  VYDDSSTIPLHETFITSPDQTSTSIDTPSPSPISHHFGTSTTTDLRRSTRSSKPPGWLHD 629

Query: 339  YAV----NQAQSVTHTAVHP-----SFNCF-------LATLTSTTDPSSFDEAIQHTRWV 470
            +      +   S+T +  HP     S++         L   ++  +P+S++EA+QH+ W+
Sbjct: 630  FVHIATHSPTSSLTCSTAHPLSSYMSYSSISTPYFQSLCNFSAIPEPTSYNEAVQHSHWI 689

Query: 471  SAMNDELEALERNKTWSVTELPQGKTAIDCKWLFKTKFRPDGTIERYKS 617
             AM  EL+AL  N TW +  LP GK AI CKW++K KF   G +ERYK+
Sbjct: 690  QAMELELKALHDNHTWDLVPLPLGKKAIGCKWVYKVKFNAQGEVERYKA 738


>ref|XP_003545301.1| PREDICTED: uncharacterized protein LOC100820591 [Glycine max]
          Length = 1057

 Score =  108 bits (271), Expect = 6e-22
 Identities = 65/216 (30%), Positives = 108/216 (50%), Gaps = 11/216 (5%)
 Frame = +3

Query: 3   RLLDLKTNKEFVSRDVKFYEDIFPFDPQAISQFMQXXXXXXXXXXXXGQVTVDEEYVSNE 182
           +LL+L T + F+SRDVKF+E+IFPF  Q  +   +                +D+  +S+ 
Sbjct: 349 KLLNLSTKQIFISRDVKFFENIFPFKNQQSNNSDRELLDPYVTPNLITSTNLDDTDISS- 407

Query: 183 NLLRXXXXXFLRSPSPERVHSPSRVDSADANTEENRVRRSTRLRGPPEWHKD---YAVNQ 353
                       +P P ++  P+     D   +E  +RRST++   P++  D   Y V +
Sbjct: 408 -----ITDTLQHTPQPAQL-DPATTIQPDIPIQEP-LRRSTKVSNTPKYLIDFHCYNVTR 460

Query: 354 AQSVTHTAVHP--------SFNCFLATLTSTTDPSSFDEAIQHTRWVSAMNDELEALERN 509
              VT+   H         S   ++  ++   +P ++ +AI+H  W  A++ EL A+E N
Sbjct: 461 TNKVTYPIQHHLDYSKLSNSHKHYICQISENHEPQTYSQAIKHKPWQEAISTELMAMELN 520

Query: 510 KTWSVTELPQGKTAIDCKWLFKTKFRPDGTIERYKS 617
           KTW++   PQGK  I CKW+FK K   +GT+ R+K+
Sbjct: 521 KTWTIVPFPQGKKPISCKWIFKLKLHSNGTVARHKA 556


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