BLASTX nr result

ID: Bupleurum21_contig00024048 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024048
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera]   117   1e-24
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]   115   4e-24
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]   115   5e-24
emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]   114   6e-24
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t...   114   8e-24

>emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera]
          Length = 1461

 Score =  117 bits (292), Expect = 1e-24
 Identities = 62/105 (59%), Positives = 73/105 (69%)
 Frame = -1

Query: 369  RLVILGCRQKYGRDFTETFAPVAKMTTVRTMLAVAAVQNWHTLQMDVSNAFLHGELLEDV 190
            RLV+LG  Q+ G D+ ETF+PVAKMTTVRT LA+AA +NW   QMDV NAFLHG+L E+V
Sbjct: 1015 RLVVLGNHQEAGIDYHETFSPVAKMTTVRTFLAIAASKNWELHQMDVHNAFLHGDLEEEV 1074

Query: 189  YMKLPKGYTHIGCRIAVNGSNKGNSALNLVCKLHKALYGLKQAPR 55
            YMKLP G+                S  NLVC+L K+LYGLKQAPR
Sbjct: 1075 YMKLPPGFE--------------RSDPNLVCRLRKSLYGLKQAPR 1105


>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
          Length = 1450

 Score =  115 bits (288), Expect = 4e-24
 Identities = 61/105 (58%), Positives = 73/105 (69%)
 Frame = -1

Query: 369  RLVILGCRQKYGRDFTETFAPVAKMTTVRTMLAVAAVQNWHTLQMDVSNAFLHGELLEDV 190
            RLV+LG  Q+ G D+ ETF+PVAKMTTVR  LA+AA +NW   QMDV NAFLHG+L E+V
Sbjct: 1015 RLVVLGNHQEAGIDYHETFSPVAKMTTVRAFLAIAASKNWELHQMDVHNAFLHGDLEEEV 1074

Query: 189  YMKLPKGYTHIGCRIAVNGSNKGNSALNLVCKLHKALYGLKQAPR 55
            YMKLP G+               +S  NLVC+L K+LYGLKQAPR
Sbjct: 1075 YMKLPPGFE--------------SSDPNLVCRLRKSLYGLKQAPR 1105


>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
          Length = 1178

 Score =  115 bits (287), Expect = 5e-24
 Identities = 61/105 (58%), Positives = 72/105 (68%)
 Frame = -1

Query: 369  RLVILGCRQKYGRDFTETFAPVAKMTTVRTMLAVAAVQNWHTLQMDVSNAFLHGELLEDV 190
            RLV+LG  Q+ G D+ ETF+PVAKMTTVR  LA+AA +NW   QMDV NAFLHG+L E+V
Sbjct: 732  RLVVLGNHQEAGIDYHETFSPVAKMTTVRAFLAIAASKNWELHQMDVHNAFLHGDLEEEV 791

Query: 189  YMKLPKGYTHIGCRIAVNGSNKGNSALNLVCKLHKALYGLKQAPR 55
            YMKLP G+                S  NLVC+L K+LYGLKQAPR
Sbjct: 792  YMKLPPGFE--------------RSDPNLVCRLRKSLYGLKQAPR 822


>emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]
          Length = 1129

 Score =  114 bits (286), Expect = 6e-24
 Identities = 61/105 (58%), Positives = 73/105 (69%)
 Frame = -1

Query: 369 RLVILGCRQKYGRDFTETFAPVAKMTTVRTMLAVAAVQNWHTLQMDVSNAFLHGELLEDV 190
           RLV+LG  Q+ G D+ ETF+PVAKMTTVR  LA+AA +NW   QMDV NAFLHG+L E+V
Sbjct: 683 RLVVLGNHQEAGIDYHETFSPVAKMTTVRAFLAIAASKNWELHQMDVHNAFLHGDLEEEV 742

Query: 189 YMKLPKGYTHIGCRIAVNGSNKGNSALNLVCKLHKALYGLKQAPR 55
           YMKLP G+               +S  NLVC+L K+LYGLKQAPR
Sbjct: 743 YMKLPPGFE--------------SSDPNLVCRLWKSLYGLKQAPR 773


>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1109

 Score =  114 bits (285), Expect = 8e-24
 Identities = 61/105 (58%), Positives = 74/105 (70%)
 Frame = -1

Query: 369 RLVILGCRQKYGRDFTETFAPVAKMTTVRTMLAVAAVQNWHTLQMDVSNAFLHGELLEDV 190
           RLV+LG  QK G D+ ETFAPVAKM+TVR  L VAA ++WH  QMDV NAFLHG+L E+V
Sbjct: 663 RLVVLGNCQKEGVDYDETFAPVAKMSTVRLFLGVAAARDWHVHQMDVHNAFLHGDLKEEV 722

Query: 189 YMKLPKGYTHIGCRIAVNGSNKGNSALNLVCKLHKALYGLKQAPR 55
           YMKLP+G+         +  +K       VC+LHK+LYGLKQAPR
Sbjct: 723 YMKLPQGF-------QCDDPSK-------VCRLHKSLYGLKQAPR 753


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