BLASTX nr result

ID: Bupleurum21_contig00024043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024043
         (1266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282416.2| PREDICTED: protein TIFY 8-like [Vitis vinife...   352   9e-95
ref|XP_002515600.1| hypothetical protein RCOM_0927570 [Ricinus c...   347   5e-93
ref|XP_002324269.1| predicted protein [Populus trichocarpa] gi|2...   339   1e-90
ref|XP_002308637.1| predicted protein [Populus trichocarpa] gi|2...   337   5e-90
ref|XP_003522639.1| PREDICTED: protein TIFY 8-like [Glycine max]      325   2e-86

>ref|XP_002282416.2| PREDICTED: protein TIFY 8-like [Vitis vinifera]
            gi|296081988|emb|CBI20993.3| unnamed protein product
            [Vitis vinifera]
          Length = 441

 Score =  352 bits (904), Expect = 9e-95
 Identities = 213/446 (47%), Positives = 271/446 (60%), Gaps = 25/446 (5%)
 Frame = -2

Query: 1265 MALLMMAQSNSKKNIDNIAED--VKPTIFHDFLSKECGS----------LPAAGDVRPSL 1122
            MA++ M  S S  N    A    + P IFHDFL   C S          +   GD R S 
Sbjct: 1    MAVMRMGHSKSIANNTGTASGSGMNP-IFHDFLGMSCASDSPVVFAPKTVGHGGDARRS- 58

Query: 1121 EXXXXXXXXXXXXXXXXXXXXXXXSDLASERRAGNHIEGVPFYGLRSDFTGSDIARRFTS 942
            E                       SDL SER+AG+H +GVPFYG +SD +G +I+ R   
Sbjct: 59   EASPSASASAGASSGGGRGPISTTSDLGSERQAGDHFDGVPFYGPKSDISGPEISNRLAG 118

Query: 941  NKRGNSECTFLGSSRDGFQHLRPNSLDNSHIMKMFR-GTGG--PRRPQDEESFFGMPPVR 771
            +KR NS+ +F+GSSRDG   + P SL++SH+MK+ R GTGG  PRR  DEE F G+  +R
Sbjct: 119  SKRSNSD-SFMGSSRDGVPQIGPESLESSHLMKILRNGTGGDRPRRSSDEELFLGLQSLR 177

Query: 770  PNSDSLTMQPATSVRTDFSTSKWERATPISVGPVLHYPPRIGQVVPYGYQSSPNRFKD-- 597
            P S SL +QP T  RTD + SKW+R+  ++V P + YP R GQ  P+ +Q  PNRFKD  
Sbjct: 178  PTSASLILQPPTGSRTDVNLSKWDRSVTMNVNPTVQYPLRAGQFAPFLHQVPPNRFKDAN 237

Query: 596  -NNVAPSIVSQ-AADEGSRTGMKGSGILNSI--NVSGGASDK----YVPSAGKQKLGNQI 441
              N  PS +SQ AADEGSRTG+KGSGIL+SI  N SG  S++     +PS  + K    I
Sbjct: 238  SGNAGPSNLSQPAADEGSRTGIKGSGILSSITANASGSVSERNPSGLLPSGNRPKSRTHI 297

Query: 440  AETDSSNSQSRQGVTSATRQMTIFYGGQALVFDDVHPNKADVIMALAGSNGGSWSTNFAQ 261
             E +SS + SR G TS++RQMTIFYGGQA VFDDVHPNKADVIMALAGSNGGSWST ++ 
Sbjct: 298  LEPESSTAPSRLGSTSSSRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTTYSP 357

Query: 260  NPTVGPPPTEVNLPSAENETGIAIKSSFPRDFRGRFSIAGNSNHGLGSIDRTSIPPGFHE 81
              TV   P   + P+ ENETG+A  S FPR+FRGR S+ GN + G GS DR     G  +
Sbjct: 358  KSTV--KPVGESTPNGENETGMAGNSMFPREFRGRLSLTGNPSQGYGSGDRILTLTGAPQ 415

Query: 80   GNIAVKDSKSLNQVAELSNEKKKHEL 3
            G    KD+++  + AE S E+K+ E+
Sbjct: 416  GVNIPKDTRNPVKAAEPSTEEKRREV 441


>ref|XP_002515600.1| hypothetical protein RCOM_0927570 [Ricinus communis]
            gi|223545544|gb|EEF47049.1| hypothetical protein
            RCOM_0927570 [Ricinus communis]
          Length = 446

 Score =  347 bits (889), Expect = 5e-93
 Identities = 186/354 (52%), Positives = 243/354 (68%), Gaps = 9/354 (2%)
 Frame = -2

Query: 1046 DLASERRAGNHIEGVPFYGLRSDFTGSDIARRFTSNKRGNSECTFLGSSRDGFQHLRPNS 867
            DLASER+AGNH+EG+PFYG  SD +G +I+ R   +KR NS+  F  SS+DG  H+  +S
Sbjct: 97   DLASERQAGNHLEGIPFYGPMSDISGPEISNRLAGSKRSNSDSAFTASSKDGIPHMAHDS 156

Query: 866  LDNSHIMKMFR-GTGGPR--RPQDEESFFGMPPVRPNSDSLTMQPATSVRTDFSTSKWER 696
            L++ H+MKM + GTGG R  R  D+E+F+GM  +RP S SL +Q +T  R D + SKWER
Sbjct: 157  LESLHLMKMLKNGTGGDRHRRSNDDEAFYGMQAMRPTSASLILQSSTGGRLDANVSKWER 216

Query: 695  ATPISVGPVLHYPPRIGQVVPYGYQSSPNRFKDNNVAPSIVSQ-AADEGSRTGMKGSGIL 519
              PI VG  + YPPR GQ VP+ +Q S N+F++ N   SI+SQ AADEGSRTG+KG GIL
Sbjct: 217  --PIPVGTAIQYPPRAGQFVPFVHQVSANKFREMNAGTSIISQSAADEGSRTGIKGPGIL 274

Query: 518  NSINVSGGASDKY----VPSAGKQKLGNQIAETDSSNSQSRQGVTSATRQMTIFYGGQAL 351
            +S+N   G S+K     +PS  K K G  +++ +SS   SRQG+TSA+RQMTIFYGGQA 
Sbjct: 275  SSLNTGSGISEKNSSGALPSGSKLKSGTHVSDPESSTPSSRQGLTSASRQMTIFYGGQAH 334

Query: 350  VFDDVHPNKADVIMALAGSNGGSWSTNFAQNPTVGPPPTEVNLPSAENETGIAIKSSFPR 171
            VFDDVHPNKADVIMALAGSNGGSWST ++  PT+  P  E+++ S ENE G A   +  R
Sbjct: 335  VFDDVHPNKADVIMALAGSNGGSWSTTYSPKPTM-RPGGEIHMTSGENEAGDA---ACQR 390

Query: 170  DFRGRFSIAGNSNHGLGSIDRTSIPPGFHEGNIAVKD-SKSLNQVAELSNEKKK 12
            +FR R S   N+  G+GS DR S+P G H G+I + D +++  Q  E S E K+
Sbjct: 391  EFRARLSGITNTTQGVGSGDRVSMPTGGHHGSIMIADKTRNPGQAGEASTEDKR 444


>ref|XP_002324269.1| predicted protein [Populus trichocarpa] gi|222865703|gb|EEF02834.1|
            predicted protein [Populus trichocarpa]
          Length = 440

 Score =  339 bits (869), Expect = 1e-90
 Identities = 183/354 (51%), Positives = 238/354 (67%), Gaps = 10/354 (2%)
 Frame = -2

Query: 1046 DLASERRAGNHIEGVPFYGLRSDFTGSDIARRFTSNKRGNSECTFLGSSRDGFQHLRPNS 867
            DLASER+AGNH+EG+PFYG RSD +G +I+ R   +KR NS+  F G  RDG   +  +S
Sbjct: 92   DLASERQAGNHLEGIPFYGPRSDISGPEISNRLAGSKRSNSDSAFTGP-RDGVPQMAHDS 150

Query: 866  LDNSHIMKMFRGTGG---PRRPQDEESFFGMPPVRPNSDSLTMQPATSVRTDFSTSKWER 696
             ++ H+MKM +  GG    RR  D+E F+GM   RP+S SL++QP+   R D + SKWER
Sbjct: 151  TESLHLMKMLKNGGGGEWSRRSNDDEVFYGMQSKRPSSASLSLQPSAGNRLDANVSKWER 210

Query: 695  ATPISVGPVLHYPPRIGQVVPYGYQSSPNRFKDNNVAPSIVSQ-AADEGSRTGMKGSGIL 519
            + P+ VG    YP R GQ VP+ +Q   NRF+D N  PS++SQ AADEGSRTG+KG GIL
Sbjct: 211  SIPMGVGA---YPTRGGQFVPFTHQIPTNRFRDTNAGPSVISQSAADEGSRTGIKGPGIL 267

Query: 518  NSINVSGGASDKY----VPSAGKQKLGNQIAETDSSNSQSRQGVTSATRQMTIFYGGQAL 351
            +SIN   G S+K     + S GK K+G  I+E +SS   S++G+TSA+RQMTIFYGGQA 
Sbjct: 268  SSINAGSGISEKNSSGGLSSGGKPKIGIHISEPESSTPASQKGLTSASRQMTIFYGGQAH 327

Query: 350  VFDDVHPNKADVIMALAGSNGGSWSTNFAQNPTVGPPPTEVNLPSAENETGIAIKSSFPR 171
            VFDDVHPNKADVIM+LAGSNGGSWST ++  PT     +E  + S E E  +A  + FP 
Sbjct: 328  VFDDVHPNKADVIMSLAGSNGGSWSTTYSPKPT-ARQGSESFMTSNEYEGAVAANTPFPH 386

Query: 170  DFRGRFSIAGNSNHGLGSIDRTSIPPGFHEGN--IAVKDSKSLNQVAELSNEKK 15
            +FRGR  + GN+ H +GS DR S P G H G+  I  K++++L Q  E SNE K
Sbjct: 387  EFRGRTFVTGNATHAVGSGDRISTPAGGHHGSSIIIAKETRNLVQAREPSNEDK 440


>ref|XP_002308637.1| predicted protein [Populus trichocarpa] gi|222854613|gb|EEE92160.1|
            predicted protein [Populus trichocarpa]
          Length = 430

 Score =  337 bits (863), Expect = 5e-90
 Identities = 185/355 (52%), Positives = 233/355 (65%), Gaps = 11/355 (3%)
 Frame = -2

Query: 1046 DLASERRAGNHIEGVPFYGLRSDFTGSDIARRFTSNKRGNSECTFLGSSRDGFQHLRPNS 867
            DLASER+AGNH+EG+PFYG RSD +G +I+ R   +KR NS+  F GS RDG   +  +S
Sbjct: 92   DLASERQAGNHLEGIPFYGPRSDISGPEISNRLAGSKRSNSDSAFTGS-RDGIPQMAHDS 150

Query: 866  LDNSHIMK--MFRGTGG---PRRPQDEESFFGMPPVRPNSDSLTMQPATSVRTDFSTSKW 702
            +++ H+MK  M +  GG   PRR  D+E F+GM P+RP+S SL +QP+   R D + SK 
Sbjct: 151  IESLHLMKIQMLKNGGGRERPRRSNDDEVFYGMQPMRPSSASLILQPSAGSRLDANVSKQ 210

Query: 701  ERATPISVGPVLHYPPRIGQVVPYGYQSSPNRFKDNNVAPSIVSQ-AADEGSRTGMKGSG 525
            +R+ P+ +G    YPPR GQ VP+ +Q   NRF+D N  PSIVSQ AADEGSRTG+KG G
Sbjct: 211  DRSIPMGIGA---YPPRGGQFVPFTHQVPTNRFRDTNAGPSIVSQSAADEGSRTGIKGPG 267

Query: 524  ILNSINVSGGASDKY----VPSAGKQKLGNQIAETDSSNSQSRQGVTSATRQMTIFYGGQ 357
            IL+SIN   G S+K     +PS GK K G  I+E +SSN  SRQG+TSA+RQMTIFYGGQ
Sbjct: 268  ILSSINAGSGISEKNSSRGLPSGGKPKTGIHISEPESSNPSSRQGLTSASRQMTIFYGGQ 327

Query: 356  ALVFDDVHPNKADVIMALAGSNGGSWSTNFAQNPTVGPPPTEVNLPSAENETGIAIKSSF 177
            A VFDDVHPNKADVIMALAGSNGGSWST ++  PT             E E         
Sbjct: 328  AHVFDDVHPNKADVIMALAGSNGGSWSTTYSPKPTASQGSESYMTSGGEYE--------- 378

Query: 176  PRDFRGRFSIAGNSNHGLGSIDRTSIPPGFHEGNIAV-KDSKSLNQVAELSNEKK 15
                RGR S+ GN+  G+GS DR S P G H G+I + K+ ++  Q  E SNE+K
Sbjct: 379  ---LRGRLSVTGNATRGVGSSDRISTPTGGHHGSIVIAKERRNAVQAGEPSNEEK 430


>ref|XP_003522639.1| PREDICTED: protein TIFY 8-like [Glycine max]
          Length = 415

 Score =  325 bits (833), Expect = 2e-86
 Identities = 191/426 (44%), Positives = 265/426 (62%), Gaps = 10/426 (2%)
 Frame = -2

Query: 1259 LLMMAQSNSKKNIDNIAEDVKPTIFHDFLS-KECGSLPAAGDVRPSLEXXXXXXXXXXXX 1083
            LL MAQ ++  N ++ A   +  + HDFL  K     P   DVR                
Sbjct: 4    LLRMAQPHNG-NTNSTAN--QQLVLHDFLGMKPAADSPQTADVR-------FPEPSASAS 53

Query: 1082 XXXXXXXXXXXSDLASERRAGNHIEGVPFYGLRSDFTGSDIARRFTSNKRGNSECTFLGS 903
                       SD+ASE++ GNH+EGVPFYG RSDF+G++I+ R   NKR NS+ TF+GS
Sbjct: 54   SAGGRGPFSATSDIASEKQIGNHLEGVPFYGPRSDFSGTEISNRLVGNKRSNSDSTFMGS 113

Query: 902  SRDGFQHLRPNSLDNSHIMKMFRGTG-GPR--RPQDEESFFGMPPVRPNSDSLTMQPATS 732
            SRD  Q + P+S  NSH+MK+ R    G R  RP D+E   GM  ++P+S  +  QP TS
Sbjct: 114  SRDALQMV-PDSFQNSHLMKVLRSAAEGERSQRPNDDEVLLGMQSMKPSSSQI-FQPPTS 171

Query: 731  VRTDFSTSKWERATPISVGPVLHYPPRIGQVVPYGYQSSPNRFKDNNVAPSIVSQ-AADE 555
             + D   +KWER+  ++VGP + +P R  Q+ P+ +Q + ++ +D+N  PS +SQ AADE
Sbjct: 172  TKID--ANKWERSILMNVGPSMQHPLRGAQLAPFVHQMASSKIRDSNAGPSFISQSAADE 229

Query: 554  GSRTGMKGSGILNSINVSGGASDKYVPSA-----GKQKLGNQIAETDSSNSQSRQGVTSA 390
            GSRTG+KG GIL+SIN +  A++K +PSA      + K G  I E+ +  S S+ G+TSA
Sbjct: 230  GSRTGIKGPGILSSINAAATATEKTIPSAVMLGGSRPKPGTNIIESSTPPS-SQHGLTSA 288

Query: 389  TRQMTIFYGGQALVFDDVHPNKADVIMALAGSNGGSWSTNFAQNPTVGPPPTEVNLPSAE 210
             RQMTIFYGGQA VFDDVHP+KADVIMALAGSNGGSWST F+    V    ++ NL   E
Sbjct: 289  CRQMTIFYGGQAHVFDDVHPHKADVIMALAGSNGGSWSTAFSPKSVV-KMVSDGNLHGGE 347

Query: 209  NETGIAIKSSFPRDFRGRFSIAGNSNHGLGSIDRTSIPPGFHEGNIAVKDSKSLNQVAEL 30
            NETG+    +FP++  G+ SI G+S+H +G  DR + P G H+G++  KD+++L Q  + 
Sbjct: 348  NETGLVSNVAFPQELHGKLSITGSSSHAIGLGDRVTTPAGAHQGSVFAKDTRTLVQPPDP 407

Query: 29   SNEKKK 12
            S+E K+
Sbjct: 408  SSEDKR 413


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