BLASTX nr result

ID: Bupleurum21_contig00024042 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024042
         (1252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ34253.1| unnamed protein product [Thellungiella halophila]     167   5e-39
ref|NP_201053.2| myb domain protein 96 [Arabidopsis thaliana] gi...   162   2e-37
gb|AAS10115.1| MYB transcription factor [Arabidopsis thaliana]        162   2e-37
emb|CAA09728.1| MYB96 protein [Arabidopsis thaliana]                  160   6e-37
ref|NP_851248.1| myb domain protein 96 [Arabidopsis thaliana] gi...   158   3e-36

>dbj|BAJ34253.1| unnamed protein product [Thellungiella halophila]
          Length = 355

 Score =  167 bits (423), Expect = 5e-39
 Identities = 102/242 (42%), Positives = 139/242 (57%), Gaps = 3/242 (1%)
 Frame = +1

Query: 181 NRGLQRLSRSCKQRWTNYLRPGIKRGNFTDEENRKIIHLQSVLGNRWAAIARYLPERTES 360
           N GL+R S+SC+ RWTNYLRPGIKRGNFT+ E + I+HLQ++LGNRWAAIA YLPERT++
Sbjct: 43  NTGLKRCSKSCRLRWTNYLRPGIKRGNFTEHEEKMIVHLQALLGNRWAAIASYLPERTDN 102

Query: 361 DIRIYWNKHLKKKVNR-SRSGRNDVSQHGAGGSSSNTTIHEFNQETESFKGRWVRTLHTN 537
           DI+ YWN HLKKK+ + +  G  D      G SSSNT+  +  Q   S KG+W R L T+
Sbjct: 103 DIKNYWNTHLKKKLKKINEFGEED----NDGFSSSNTSSQK--QHQSSNKGQWERRLQTD 156

Query: 538 VRRAAIALLEATTPTRAPGDTLPPAAHGLDSSLAKATPPLHSSDLLNFKPPNRWMNLSSN 717
           +  A  AL EA +  +    TL P++  L   +     P  SS LL     +R  +LSS+
Sbjct: 157 INMAKQALCEALSLDKPSSSTLSPSSSPLSPVIVPQNIPSFSSALL-----DRCYDLSSS 211

Query: 718 QQQIPISADHHQLCSPADAQANQASSNPISS--YPYSAKNIAQLLQGWNKESHKSAVAEE 891
                 +              +  ++NP  S  Y  SA+NIA+LLQ + K++ K+     
Sbjct: 212 SSSTTTTT--------TTTITSNTTTNPYPSGVYASSAENIARLLQDFMKDTPKALTLTS 263

Query: 892 ES 897
            S
Sbjct: 264 SS 265


>ref|NP_201053.2| myb domain protein 96 [Arabidopsis thaliana]
           gi|90093292|gb|ABD85159.1| At5g62470 [Arabidopsis
           thaliana] gi|110737854|dbj|BAF00865.1| MYB96
           transcription factor-like protein [Arabidopsis thaliana]
           gi|332010228|gb|AED97611.1| myb domain protein 96
           [Arabidopsis thaliana]
          Length = 352

 Score =  162 bits (410), Expect = 2e-37
 Identities = 99/240 (41%), Positives = 137/240 (57%), Gaps = 3/240 (1%)
 Frame = +1

Query: 187 GLQRLSRSCKQRWTNYLRPGIKRGNFTDEENRKIIHLQSVLGNRWAAIARYLPERTESDI 366
           GL+R S+SC+ RWTNYLRPGIKRGNFT+ E + I+HLQ++LGNRWAAIA YLPERT++DI
Sbjct: 45  GLRRCSKSCRLRWTNYLRPGIKRGNFTEHEEKTIVHLQALLGNRWAAIASYLPERTDNDI 104

Query: 367 RIYWNKHLKKKVNR-SRSGRNDVSQHGAGGSSSNTTIHEFNQETESFKGRWVRTLHTNVR 543
           + YWN HLKKK+ + + SG  D      G SSSNT+  + +Q T   KG+W R L T++ 
Sbjct: 105 KNYWNTHLKKKLKKINESGEED----NDGVSSSNTSSQKNHQSTN--KGQWERRLQTDIN 158

Query: 544 RAAIALLEATTPTRAPGDTLPPAAHGLDSSLAKATPPLHSSDLLNFKPP--NRWMNLSSN 717
            A  AL EA         +L   +  L SS +  TP +   ++ NF     +R  + SS+
Sbjct: 159 MAKQALCEAL--------SLDKPSSTLSSSSSLPTPVITQQNIRNFSSALLDRCYDPSSS 210

Query: 718 QQQIPISADHHQLCSPADAQANQASSNPISSYPYSAKNIAQLLQGWNKESHKSAVAEEES 897
                         +     +N  +  P   Y  SA+NIA+LLQ + K++ K+      S
Sbjct: 211 SSS-----------TTTTTTSNTTNPYPSGVYASSAENIARLLQDFMKDTPKALTLSSSS 259


>gb|AAS10115.1| MYB transcription factor [Arabidopsis thaliana]
          Length = 352

 Score =  162 bits (410), Expect = 2e-37
 Identities = 99/240 (41%), Positives = 137/240 (57%), Gaps = 3/240 (1%)
 Frame = +1

Query: 187 GLQRLSRSCKQRWTNYLRPGIKRGNFTDEENRKIIHLQSVLGNRWAAIARYLPERTESDI 366
           GL+R S+SC+ RWTNYLRPGIKRGNFT+ E + I+HLQ++LGNRWAAIA YLPERT++DI
Sbjct: 45  GLRRCSKSCRLRWTNYLRPGIKRGNFTEHEEKTIVHLQALLGNRWAAIASYLPERTDNDI 104

Query: 367 RIYWNKHLKKKVNR-SRSGRNDVSQHGAGGSSSNTTIHEFNQETESFKGRWVRTLHTNVR 543
           + YWN HLKKK+ + + SG  D      G SSSNT+  + +Q T   KG+W R L T++ 
Sbjct: 105 KNYWNTHLKKKLKKINESGEED----NDGVSSSNTSSQKNHQSTN--KGQWERRLQTDIN 158

Query: 544 RAAIALLEATTPTRAPGDTLPPAAHGLDSSLAKATPPLHSSDLLNFKPP--NRWMNLSSN 717
            A  AL EA         +L   +  L SS +  TP +   ++ NF     +R  + SS+
Sbjct: 159 MAKQALCEAL--------SLDKPSSTLSSSSSLPTPVITQQNIRNFSSALLDRCYDPSSS 210

Query: 718 QQQIPISADHHQLCSPADAQANQASSNPISSYPYSAKNIAQLLQGWNKESHKSAVAEEES 897
                         +     +N  +  P   Y  SA+NIA+LLQ + K++ K+      S
Sbjct: 211 SSS-----------TTTTTTSNTTNPYPSGVYASSAENIARLLQDFMKDTPKALTLSSSS 259


>emb|CAA09728.1| MYB96 protein [Arabidopsis thaliana]
          Length = 343

 Score =  160 bits (405), Expect = 6e-37
 Identities = 98/240 (40%), Positives = 137/240 (57%), Gaps = 3/240 (1%)
 Frame = +1

Query: 187 GLQRLSRSCKQRWTNYLRPGIKRGNFTDEENRKIIHLQSVLGNRWAAIARYLPERTESDI 366
           GL+R S+SC+ RWTNYLRPGIKRGNFT+ E + I+HLQ++LGNRWAAIA YLPERT++DI
Sbjct: 36  GLRRCSKSCRLRWTNYLRPGIKRGNFTEHEEKTIVHLQALLGNRWAAIASYLPERTDNDI 95

Query: 367 RIYWNKHLKKKVNR-SRSGRNDVSQHGAGGSSSNTTIHEFNQETESFKGRWVRTLHTNVR 543
           + YWN HLKKK+ + + SG  D      G SSS+T+  + +Q T   KG+W R L T++ 
Sbjct: 96  KNYWNTHLKKKLKKINESGEED----NDGVSSSSTSSQKNHQSTN--KGQWERRLQTDIN 149

Query: 544 RAAIALLEATTPTRAPGDTLPPAAHGLDSSLAKATPPLHSSDLLNFKPP--NRWMNLSSN 717
            A  AL EA         +L   +  L SS +  TP +   ++ NF     +R  + SS+
Sbjct: 150 MAKQALCEAL--------SLDKPSSTLSSSSSLPTPVITQQNIRNFSSALLDRCYDPSSS 201

Query: 718 QQQIPISADHHQLCSPADAQANQASSNPISSYPYSAKNIAQLLQGWNKESHKSAVAEEES 897
                         +     +N  +  P   Y  SA+NIA+LLQ + K++ K+      S
Sbjct: 202 SSS-----------TTTTTTSNTTNPYPSGVYASSAENIARLLQDFMKDTPKALTLSSSS 250


>ref|NP_851248.1| myb domain protein 96 [Arabidopsis thaliana]
           gi|5823335|gb|AAD53106.1|AF176001_1 putative
           transcription factor [Arabidopsis thaliana]
           gi|10178078|dbj|BAB11497.1| MYB96 transcription
           factor-like protein [Arabidopsis thaliana]
           gi|332010227|gb|AED97610.1| myb domain protein 96
           [Arabidopsis thaliana]
          Length = 351

 Score =  158 bits (399), Expect = 3e-36
 Identities = 97/237 (40%), Positives = 134/237 (56%), Gaps = 3/237 (1%)
 Frame = +1

Query: 196 RLSRSCKQRWTNYLRPGIKRGNFTDEENRKIIHLQSVLGNRWAAIARYLPERTESDIRIY 375
           R S+SC+ RWTNYLRPGIKRGNFT+ E + I+HLQ++LGNRWAAIA YLPERT++DI+ Y
Sbjct: 47  RCSKSCRLRWTNYLRPGIKRGNFTEHEEKTIVHLQALLGNRWAAIASYLPERTDNDIKNY 106

Query: 376 WNKHLKKKVNR-SRSGRNDVSQHGAGGSSSNTTIHEFNQETESFKGRWVRTLHTNVRRAA 552
           WN HLKKK+ + + SG  D      G SSSNT+  + +Q T   KG+W R L T++  A 
Sbjct: 107 WNTHLKKKLKKINESGEED----NDGVSSSNTSSQKNHQSTN--KGQWERRLQTDINMAK 160

Query: 553 IALLEATTPTRAPGDTLPPAAHGLDSSLAKATPPLHSSDLLNFKPP--NRWMNLSSNQQQ 726
            AL EA         +L   +  L SS +  TP +   ++ NF     +R  + SS+   
Sbjct: 161 QALCEAL--------SLDKPSSTLSSSSSLPTPVITQQNIRNFSSALLDRCYDPSSSSSS 212

Query: 727 IPISADHHQLCSPADAQANQASSNPISSYPYSAKNIAQLLQGWNKESHKSAVAEEES 897
                      +     +N  +  P   Y  SA+NIA+LLQ + K++ K+      S
Sbjct: 213 -----------TTTTTTSNTTNPYPSGVYASSAENIARLLQDFMKDTPKALTLSSSS 258


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