BLASTX nr result

ID: Bupleurum21_contig00024033 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024033
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264328.2| PREDICTED: small RNA 2'-O-methyltransferase-...   170   1e-40
emb|CBI31031.3| unnamed protein product [Vitis vinifera]              170   1e-40
pdb|3HTX|A Chain A, Crystal Structure Of Small Rna Methyltransfe...   155   4e-36
gb|AAL05056.1|AF411383_1 HEN1 [Arabidopsis thaliana]                  155   4e-36
ref|XP_004135729.1| PREDICTED: small RNA 2'-O-methyltransferase-...   154   6e-36

>ref|XP_002264328.2| PREDICTED: small RNA 2'-O-methyltransferase-like [Vitis vinifera]
          Length = 948

 Score =  170 bits (431), Expect = 1e-40
 Identities = 85/122 (69%), Positives = 94/122 (77%)
 Frame = -3

Query: 366 TLTPKAIIHQRFGTNAVYKVEEVQEHAGIGCPGLNIPQKGPCHFRCSLQLPEVTVVSELC 187
           T TPKAIIHQ+FG  A YKVEEVQ     GCPGL IPQKGPC FRCSLQLPE +VVSE  
Sbjct: 13  THTPKAIIHQKFGDKACYKVEEVQGDTQNGCPGLAIPQKGPCLFRCSLQLPEFSVVSEYF 72

Query: 186 KRKKDAEQSAAEKAIEKLGISSTVSNPTAPEARDELVARLKYLFSDAFFSTVHPLSGHFR 7
           KRKKDAEQSAAEKA+ KLG+    SN    E  DEL++RL YLF+D F S++HPLSGHFR
Sbjct: 73  KRKKDAEQSAAEKALRKLGVDPAASNSIVREPWDELISRLSYLFADEFLSSLHPLSGHFR 132

Query: 6   AA 1
           AA
Sbjct: 133 AA 134


>emb|CBI31031.3| unnamed protein product [Vitis vinifera]
          Length = 931

 Score =  170 bits (431), Expect = 1e-40
 Identities = 85/122 (69%), Positives = 94/122 (77%)
 Frame = -3

Query: 366 TLTPKAIIHQRFGTNAVYKVEEVQEHAGIGCPGLNIPQKGPCHFRCSLQLPEVTVVSELC 187
           T TPKAIIHQ+FG  A YKVEEVQ     GCPGL IPQKGPC FRCSLQLPE +VVSE  
Sbjct: 13  THTPKAIIHQKFGDKACYKVEEVQGDTQNGCPGLAIPQKGPCLFRCSLQLPEFSVVSEYF 72

Query: 186 KRKKDAEQSAAEKAIEKLGISSTVSNPTAPEARDELVARLKYLFSDAFFSTVHPLSGHFR 7
           KRKKDAEQSAAEKA+ KLG+    SN    E  DEL++RL YLF+D F S++HPLSGHFR
Sbjct: 73  KRKKDAEQSAAEKALRKLGVDPAASNSIVREPWDELISRLSYLFADEFLSSLHPLSGHFR 132

Query: 6   AA 1
           AA
Sbjct: 133 AA 134


>pdb|3HTX|A Chain A, Crystal Structure Of Small Rna Methyltransferase Hen1
           gi|260099983|pdb|3HTX|D Chain D, Crystal Structure Of
           Small Rna Methyltransferase Hen1
          Length = 950

 Score =  155 bits (391), Expect = 4e-36
 Identities = 76/122 (62%), Positives = 90/122 (73%)
 Frame = -3

Query: 366 TLTPKAIIHQRFGTNAVYKVEEVQEHAGIGCPGLNIPQKGPCHFRCSLQLPEVTVVSELC 187
           T TPKAIIHQ+FG  A Y VEEV + +  GCPGL IPQKGPC +RC LQLPE +VVS + 
Sbjct: 16  TPTPKAIIHQKFGAKASYTVEEVHDSSQSGCPGLAIPQKGPCLYRCHLQLPEFSVVSNVF 75

Query: 186 KRKKDAEQSAAEKAIEKLGISSTVSNPTAPEARDELVARLKYLFSDAFFSTVHPLSGHFR 7
           K+KKD+EQSAAE A++KLGI     + T  EARDE+V R+KY+FSD F S  HPL  H R
Sbjct: 76  KKKKDSEQSAAELALDKLGIRPQNDDLTVDEARDEIVGRIKYIFSDEFLSAEHPLGAHLR 135

Query: 6   AA 1
           AA
Sbjct: 136 AA 137


>gb|AAL05056.1|AF411383_1 HEN1 [Arabidopsis thaliana]
          Length = 942

 Score =  155 bits (391), Expect = 4e-36
 Identities = 76/122 (62%), Positives = 90/122 (73%)
 Frame = -3

Query: 366 TLTPKAIIHQRFGTNAVYKVEEVQEHAGIGCPGLNIPQKGPCHFRCSLQLPEVTVVSELC 187
           T TPKAIIHQ+FG  A Y VEEV + +  GCPGL IPQKGPC +RC LQLPE +VVS + 
Sbjct: 8   TPTPKAIIHQKFGAKASYTVEEVHDSSQSGCPGLAIPQKGPCLYRCHLQLPEFSVVSNVF 67

Query: 186 KRKKDAEQSAAEKAIEKLGISSTVSNPTAPEARDELVARLKYLFSDAFFSTVHPLSGHFR 7
           K+KKD+EQSAAE A++KLGI     + T  EARDE+V R+KY+FSD F S  HPL  H R
Sbjct: 68  KKKKDSEQSAAELALDKLGIRPQNDDLTVDEARDEIVGRIKYIFSDEFLSAEHPLGAHLR 127

Query: 6   AA 1
           AA
Sbjct: 128 AA 129


>ref|XP_004135729.1| PREDICTED: small RNA 2'-O-methyltransferase-like [Cucumis sativus]
          Length = 948

 Score =  154 bits (390), Expect = 6e-36
 Identities = 77/121 (63%), Positives = 93/121 (76%)
 Frame = -3

Query: 363 LTPKAIIHQRFGTNAVYKVEEVQEHAGIGCPGLNIPQKGPCHFRCSLQLPEVTVVSELCK 184
           LTPKA+IHQ+FG+ A Y +EEV E    GCPGL I QKG C +RC+L+LP+V+VVS   K
Sbjct: 12  LTPKAVIHQKFGSKACYTIEEVHEPPQNGCPGLAIAQKGACLYRCNLELPDVSVVSGTFK 71

Query: 183 RKKDAEQSAAEKAIEKLGISSTVSNPTAPEARDELVARLKYLFSDAFFSTVHPLSGHFRA 4
           RK+DAEQSAAE AIEKLGI +  ++ T+ EA DELVAR+ YLFS  F S +HPLSGHFR 
Sbjct: 72  RKRDAEQSAAELAIEKLGIHTRTNDLTSEEACDELVARINYLFSSEFLSALHPLSGHFRD 131

Query: 3   A 1
           A
Sbjct: 132 A 132


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