BLASTX nr result

ID: Bupleurum21_contig00024028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024028
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270125.1| PREDICTED: uncharacterized protein LOC100246...   119   2e-25
emb|CAN65660.1| hypothetical protein VITISV_000955 [Vitis vinifera]   119   2e-25
ref|XP_002299532.1| predicted protein [Populus trichocarpa] gi|2...   112   3e-23
emb|CBI34670.3| unnamed protein product [Vitis vinifera]              107   1e-21
ref|XP_002303590.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21

>ref|XP_002270125.1| PREDICTED: uncharacterized protein LOC100246220 [Vitis vinifera]
          Length = 758

 Score =  119 bits (299), Expect = 2e-25
 Identities = 59/105 (56%), Positives = 74/105 (70%), Gaps = 3/105 (2%)
 Frame = +3

Query: 3   PFEKRESLKVKRGDKKSDQPLHDVHVLPGIQQRTNCLI---PAKVNVVTTSGNHSLPTTE 173
           PFEKRESLK +RG+K S++   D   L  ++Q+   ++   PAKV VVT SGNH LP+ +
Sbjct: 534 PFEKRESLKYRRGEKFSNKVHSDFLDLSMVEQKKKDVLDMSPAKVKVVTASGNHGLPSGD 593

Query: 174 SLGPSRLLDRWKLGGNCDCGGWDMGCPLNVFSNIKIQSVKDGPVV 308
           S GPS LLDRW+LGG CDCGGWDM CPL VF N  I  V+D P++
Sbjct: 594 SRGPSSLLDRWRLGGGCDCGGWDMACPLIVFDNPSILRVEDCPLM 638


>emb|CAN65660.1| hypothetical protein VITISV_000955 [Vitis vinifera]
          Length = 937

 Score =  119 bits (299), Expect = 2e-25
 Identities = 59/105 (56%), Positives = 74/105 (70%), Gaps = 3/105 (2%)
 Frame = +3

Query: 3    PFEKRESLKVKRGDKKSDQPLHDVHVLPGIQQRTNCLI---PAKVNVVTTSGNHSLPTTE 173
            PFEKRESLK +RG+K S++   D   L  ++Q+   ++   PAKV VVT SGNH LP+ +
Sbjct: 713  PFEKRESLKYRRGEKFSNKVHSDFLDLSMVEQKKKDVLDMSPAKVKVVTASGNHGLPSGD 772

Query: 174  SLGPSRLLDRWKLGGNCDCGGWDMGCPLNVFSNIKIQSVKDGPVV 308
            S GPS LLDRW+LGG CDCGGWDM CPL VF N  I  V+D P++
Sbjct: 773  SRGPSSLLDRWRLGGGCDCGGWDMACPLIVFDNPSILXVEDCPLM 817


>ref|XP_002299532.1| predicted protein [Populus trichocarpa] gi|222846790|gb|EEE84337.1|
           predicted protein [Populus trichocarpa]
          Length = 737

 Score =  112 bits (280), Expect = 3e-23
 Identities = 57/106 (53%), Positives = 69/106 (65%), Gaps = 4/106 (3%)
 Frame = +3

Query: 3   PFEKRESLKVKRGDKKSDQPLHDVHVLPGIQQRTNCLI----PAKVNVVTTSGNHSLPTT 170
           PF KRESLK KRGDK SD+   ++  L   +QR   +     P  V VV  +GNHSLP+ 
Sbjct: 512 PFAKRESLKYKRGDKGSDEMHSNLLNLSVGEQRRKTIPDKENPENVKVVIPTGNHSLPSG 571

Query: 171 ESLGPSRLLDRWKLGGNCDCGGWDMGCPLNVFSNIKIQSVKDGPVV 308
           +S GPS LLDRW+ GG CDCGGWDM CPL VF N  IQ  +D P++
Sbjct: 572 DSRGPSSLLDRWRSGGGCDCGGWDMACPLTVFGNPGIQCAEDEPLL 617


>emb|CBI34670.3| unnamed protein product [Vitis vinifera]
          Length = 1085

 Score =  107 bits (267), Expect = 1e-21
 Identities = 54/102 (52%), Positives = 62/102 (60%)
 Frame = +3

Query: 3    PFEKRESLKVKRGDKKSDQPLHDVHVLPGIQQRTNCLIPAKVNVVTTSGNHSLPTTESLG 182
            PFEKRESLK +RG+                        PAKV VVT SGNH LP+ +S G
Sbjct: 887  PFEKRESLKYRRGEN-----------------------PAKVKVVTASGNHGLPSGDSRG 923

Query: 183  PSRLLDRWKLGGNCDCGGWDMGCPLNVFSNIKIQSVKDGPVV 308
            PS LLDRW+LGG CDCGGWDM CPL VF N  I  V+D P++
Sbjct: 924  PSSLLDRWRLGGGCDCGGWDMACPLIVFDNPSILRVEDCPLM 965


>ref|XP_002303590.1| predicted protein [Populus trichocarpa] gi|222841022|gb|EEE78569.1|
           predicted protein [Populus trichocarpa]
          Length = 734

 Score =  106 bits (264), Expect = 2e-21
 Identities = 55/106 (51%), Positives = 66/106 (62%), Gaps = 4/106 (3%)
 Frame = +3

Query: 3   PFEKRESLKVKRGDKKSDQPLHDVHVLPGIQQRTNCLIPA----KVNVVTTSGNHSLPTT 170
           PF KRESLK KRGDK SD+   ++  L   +QR   +       KV VV  +G HSLP  
Sbjct: 508 PFAKRESLKYKRGDKGSDKMHSNLLNLSVGEQRMKTIRDEENQEKVKVVIPTGKHSLPRG 567

Query: 171 ESLGPSRLLDRWKLGGNCDCGGWDMGCPLNVFSNIKIQSVKDGPVV 308
           +  GPS LLDRW+ GG CDCGGWDM CPL VF N  IQ  +D P++
Sbjct: 568 DGRGPSSLLDRWRSGGGCDCGGWDMACPLTVFGNPGIQCAEDEPLL 613


Top