BLASTX nr result

ID: Bupleurum21_contig00024026 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024026
         (902 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324552.1| ABC transporter family protein [Populus tric...   375   e-101
ref|XP_002523500.1| abc transporter, putative [Ricinus communis]...   371   e-100
gb|ACD56627.1| putative ABC transporter [Gossypium raimondii]         368   e-100
ref|XP_002886415.1| ATNAP10 [Arabidopsis lyrata subsp. lyrata] g...   357   2e-96
ref|NP_176516.1| ABC transporter I family member 1 [Arabidopsis ...   357   3e-96

>ref|XP_002324552.1| ABC transporter family protein [Populus trichocarpa]
           gi|222865986|gb|EEF03117.1| ABC transporter family
           protein [Populus trichocarpa]
          Length = 229

 Score =  375 bits (962), Expect = e-101
 Identities = 183/213 (85%), Positives = 197/213 (92%)
 Frame = -2

Query: 901 NVSCMRNAQQILRHVNVSVHDGSALVLTGTNGSGKSTFLRMLAGFSKPSAGEILWNGHDI 722
           NVSCMRNAQQILRHVNVSVHDG ALVLTG+NGSGKSTFLRMLAGFSKPSAG+ILWNGHD+
Sbjct: 15  NVSCMRNAQQILRHVNVSVHDGGALVLTGSNGSGKSTFLRMLAGFSKPSAGQILWNGHDV 74

Query: 721 TDSGIFHQYKLQLNWLSLKDAVKDKFTVLDNVQWFEVLEGKQGRSLPAIQLMGLGRLAKD 542
           T+SG+FHQYKLQLNWLSLKDA+K+KFTVLDNVQWFE+LEGKQG SLPAI+LMGLGRLAKD
Sbjct: 75  TESGVFHQYKLQLNWLSLKDAIKEKFTVLDNVQWFELLEGKQGNSLPAIELMGLGRLAKD 134

Query: 541 KARLLSMGXXXXXXXXXXXAIDRPIWLLDEPSVALDDDGVKLLEHIIAEHRKKGGIVIVA 362
           KAR+LSMG           AIDRPIWLLDEPSVALDDDGV+LLE+IIA+HRKKGGIV VA
Sbjct: 135 KARMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDDGVRLLEYIIAKHRKKGGIVFVA 194

Query: 361 THLPIQIEDAMYLRLPPRFPRRMTLVDMLDRGD 263
           THLPI IEDAMYLRLPPRFPRRMTLVDMLDR +
Sbjct: 195 THLPINIEDAMYLRLPPRFPRRMTLVDMLDRAE 227


>ref|XP_002523500.1| abc transporter, putative [Ricinus communis]
           gi|223537207|gb|EEF38839.1| abc transporter, putative
           [Ricinus communis]
          Length = 229

 Score =  371 bits (953), Expect = e-100
 Identities = 179/213 (84%), Positives = 197/213 (92%)
 Frame = -2

Query: 901 NVSCMRNAQQILRHVNVSVHDGSALVLTGTNGSGKSTFLRMLAGFSKPSAGEILWNGHDI 722
           NVSCMRNAQQILRHVNVS+HDG ALVLTG+NGSGK+TFLRMLAGFSKPSAG+ILWNGHD+
Sbjct: 15  NVSCMRNAQQILRHVNVSIHDGGALVLTGSNGSGKTTFLRMLAGFSKPSAGQILWNGHDV 74

Query: 721 TDSGIFHQYKLQLNWLSLKDAVKDKFTVLDNVQWFEVLEGKQGRSLPAIQLMGLGRLAKD 542
           T+SG+FHQYKLQLNWLSLKDA+K+KFTVLDNVQWFE+LEGKQG S+ A++LMGLGRLAKD
Sbjct: 75  TESGVFHQYKLQLNWLSLKDAIKEKFTVLDNVQWFEILEGKQGNSMRALELMGLGRLAKD 134

Query: 541 KARLLSMGXXXXXXXXXXXAIDRPIWLLDEPSVALDDDGVKLLEHIIAEHRKKGGIVIVA 362
           KAR+LSMG           AIDRPIWLLDEPSVALDD+GV+LLE+IIAEHRKKGGIV VA
Sbjct: 135 KARMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDEGVRLLEYIIAEHRKKGGIVFVA 194

Query: 361 THLPIQIEDAMYLRLPPRFPRRMTLVDMLDRGD 263
           THLPI+IEDAMYLRLPPRFPRRMTLVDMLDR D
Sbjct: 195 THLPIEIEDAMYLRLPPRFPRRMTLVDMLDRAD 227


>gb|ACD56627.1| putative ABC transporter [Gossypium raimondii]
          Length = 251

 Score =  368 bits (945), Expect = e-100
 Identities = 182/213 (85%), Positives = 197/213 (92%)
 Frame = -2

Query: 901 NVSCMRNAQQILRHVNVSVHDGSALVLTGTNGSGKSTFLRMLAGFSKPSAGEILWNGHDI 722
           +VSCMRNAQQILRHVNVSVHDG ALVLTG+NGSGK+TFLRMLAGFS+PSAG+ILWNGHDI
Sbjct: 37  DVSCMRNAQQILRHVNVSVHDGGALVLTGSNGSGKTTFLRMLAGFSRPSAGQILWNGHDI 96

Query: 721 TDSGIFHQYKLQLNWLSLKDAVKDKFTVLDNVQWFEVLEGKQGRSLPAIQLMGLGRLAKD 542
           + SGIFHQYKLQLNWLSLKDAVK+KFTVLDNVQWFEVLEGK G+SLPA++LMGLGRLAKD
Sbjct: 97  SQSGIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEVLEGKHGKSLPALELMGLGRLAKD 156

Query: 541 KARLLSMGXXXXXXXXXXXAIDRPIWLLDEPSVALDDDGVKLLEHIIAEHRKKGGIVIVA 362
           KAR+LSMG           AIDRPIWLLDEPSVALD++GV+LLE+IIAEHRKKGGIVIVA
Sbjct: 157 KARMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDNEGVRLLEYIIAEHRKKGGIVIVA 216

Query: 361 THLPIQIEDAMYLRLPPRFPRRMTLVDMLDRGD 263
           THLPIQIEDAM LRLPPRFPRRMTLVDMLDR D
Sbjct: 217 THLPIQIEDAMNLRLPPRFPRRMTLVDMLDRAD 249


>ref|XP_002886415.1| ATNAP10 [Arabidopsis lyrata subsp. lyrata]
           gi|297332256|gb|EFH62674.1| ATNAP10 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 229

 Score =  357 bits (917), Expect = 2e-96
 Identities = 174/213 (81%), Positives = 193/213 (90%)
 Frame = -2

Query: 901 NVSCMRNAQQILRHVNVSVHDGSALVLTGTNGSGKSTFLRMLAGFSKPSAGEILWNGHDI 722
           NVSCMRNAQQILRHVNVS+HDG ALVLTGTNGSGKSTFLRMLAGFSKPSAGEILWNGHDI
Sbjct: 15  NVSCMRNAQQILRHVNVSLHDGGALVLTGTNGSGKSTFLRMLAGFSKPSAGEILWNGHDI 74

Query: 721 TDSGIFHQYKLQLNWLSLKDAVKDKFTVLDNVQWFEVLEGKQGRSLPAIQLMGLGRLAKD 542
           T SGIF QYKLQLNW+SLKDA+K++FTVLDNVQWFE+LE K G++ PA++LMGLGRL K+
Sbjct: 75  TQSGIFQQYKLQLNWISLKDAIKERFTVLDNVQWFELLENKIGKAQPALELMGLGRLVKE 134

Query: 541 KARLLSMGXXXXXXXXXXXAIDRPIWLLDEPSVALDDDGVKLLEHIIAEHRKKGGIVIVA 362
           K+R+LSMG           AIDRPIWLLDEPSVALDD+GV+LLE+IIAEHRKKGGIVIVA
Sbjct: 135 KSRMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDEGVRLLEYIIAEHRKKGGIVIVA 194

Query: 361 THLPIQIEDAMYLRLPPRFPRRMTLVDMLDRGD 263
           THLPI+IEDAM LRLPPRFPR+MTL+DMLDR D
Sbjct: 195 THLPIEIEDAMILRLPPRFPRKMTLIDMLDRAD 227


>ref|NP_176516.1| ABC transporter I family member 1 [Arabidopsis thaliana]
           gi|47605542|sp|Q9C8T1.1|AB1I_ARATH RecName: Full=ABC
           transporter I family member 1; Short=ABC transporter
           ABCI.1; Short=AtABCI1; AltName: Full=Cytochrome c
           biogenesis ATP-binding export protein ccmA-like;
           AltName: Full=MRP-related protein 3; AltName:
           Full=Putative non-intrinsic ABC protein 10
           gi|12324363|gb|AAG52155.1|AC022355_16 hypothetical
           protein; 38474-39163 [Arabidopsis thaliana]
           gi|332195959|gb|AEE34080.1| ABC transporter I family
           member 1 [Arabidopsis thaliana]
          Length = 229

 Score =  357 bits (915), Expect = 3e-96
 Identities = 174/213 (81%), Positives = 192/213 (90%)
 Frame = -2

Query: 901 NVSCMRNAQQILRHVNVSVHDGSALVLTGTNGSGKSTFLRMLAGFSKPSAGEILWNGHDI 722
           NVSCMRNAQQILRHVNVS+HDG ALVLTGTNGSGKSTFLRMLAGFSKPSAGEILWNGHDI
Sbjct: 15  NVSCMRNAQQILRHVNVSLHDGGALVLTGTNGSGKSTFLRMLAGFSKPSAGEILWNGHDI 74

Query: 721 TDSGIFHQYKLQLNWLSLKDAVKDKFTVLDNVQWFEVLEGKQGRSLPAIQLMGLGRLAKD 542
           T SGIF QYKLQLNW+SLKDA+K++FTVLDNVQWFE+LE K G++ PA++LMGLGRL K+
Sbjct: 75  TQSGIFQQYKLQLNWISLKDAIKERFTVLDNVQWFELLENKIGKAQPALELMGLGRLVKE 134

Query: 541 KARLLSMGXXXXXXXXXXXAIDRPIWLLDEPSVALDDDGVKLLEHIIAEHRKKGGIVIVA 362
           K+R+LSMG           AIDRPIWLLDEPSVALDD+GV+LLE+IIAEHRKKGGIVIVA
Sbjct: 135 KSRMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDEGVRLLEYIIAEHRKKGGIVIVA 194

Query: 361 THLPIQIEDAMYLRLPPRFPRRMTLVDMLDRGD 263
           THLPI IEDAM LRLPPRFPR+MTL+DMLDR D
Sbjct: 195 THLPIDIEDAMILRLPPRFPRKMTLIDMLDRAD 227


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