BLASTX nr result

ID: Bupleurum21_contig00024024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024024
         (560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631444.1| PREDICTED: uncharacterized protein LOC100855...    74   2e-11
emb|CAN75750.1| hypothetical protein VITISV_032952 [Vitis vinifera]    72   6e-11
ref|XP_002329915.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07

>ref|XP_003631444.1| PREDICTED: uncharacterized protein LOC100855013 [Vitis vinifera]
           gi|297741181|emb|CBI31912.3| unnamed protein product
           [Vitis vinifera]
          Length = 187

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 38/90 (42%), Positives = 56/90 (62%)
 Frame = +2

Query: 188 KAVDKQEKHSSTVRDDESELIVLKKGVEVEISYSKETTQDEGWKRQARSMLGSSPKEAKE 367
           +A+ K+E+ S       S++IVL      ++  + + T+ EGWKR +R MLGS+P + +E
Sbjct: 99  EALSKEEEDSKRTTTG-SKIIVLSS--HEDLQQATKATKIEGWKRHSRLMLGSAPHDVEE 155

Query: 368 TMNSKEGXXXXXXXXXXYAQPHRKPPIHNR 457
           T++SKEG          YAQPHRKPPIHN+
Sbjct: 156 TVDSKEGDIVEDIVVMDYAQPHRKPPIHNK 185


>emb|CAN75750.1| hypothetical protein VITISV_032952 [Vitis vinifera]
          Length = 183

 Score = 72.0 bits (175), Expect = 6e-11
 Identities = 50/171 (29%), Positives = 75/171 (43%), Gaps = 38/171 (22%)
 Frame = +2

Query: 59  HACSARHLSLTDKKTGRTSHRIGKIDVHGKKHHSSFILTHSEP----------------- 187
           HAC+ARHL +  K+  R  H + K+     + H   +     P                 
Sbjct: 15  HACNARHLGVIGKEN-REVHLLSKVVEEADQVHKISLPPRLIPSMETAEKLQPQQILPVG 73

Query: 188 ---------------------KAVDKQEKHSSTVRDDESELIVLKKGVEVEISYSKETTQ 304
                                +A+ K+E+ S        ++IVL      ++  + + T+
Sbjct: 74  SDKRNPQENWGGVKNMIEIGSEALSKEEEDSKRTTTGX-KIIVLSS--HEDLQQATKATK 130

Query: 305 DEGWKRQARSMLGSSPKEAKETMNSKEGXXXXXXXXXXYAQPHRKPPIHNR 457
            EGWKR +R MLGS+P + +ET++SKEG          YAQPHRKPPIHN+
Sbjct: 131 IEGWKRHSRLMLGSAPHDVEETVDSKEGDIVEDIVVMDYAQPHRKPPIHNK 181


>ref|XP_002329915.1| predicted protein [Populus trichocarpa] gi|222871152|gb|EEF08283.1|
           predicted protein [Populus trichocarpa]
          Length = 183

 Score = 58.9 bits (141), Expect = 5e-07
 Identities = 49/168 (29%), Positives = 70/168 (41%), Gaps = 34/168 (20%)
 Frame = +2

Query: 59  HACSARHLSLTDKKTGRTSHRIGKIDVHGKKHHSSFILTHSE---PKAVDKQEKHSSTVR 229
           HAC+AR L LTDK+T +       +    K + +   L  SE   P + ++  +    V 
Sbjct: 15  HACNARFLRLTDKETKKQVLNKVLVQDVDKLNINRTTLAPSEMMPPVSEEQGAQGQQVVG 74

Query: 230 DDES--------ELIVLKKGVEVEISYSKETTQD-----------------------EGW 316
            DE+            +KK  E      +E T+                        EG 
Sbjct: 75  RDETITRKISLLSATTMKKKDEEAFMKQEEGTKGATSGNKVIVSSQADLQQSSKIIIEGL 134

Query: 317 KRQARSMLGSSPKEAKETMNSKEGXXXXXXXXXXYAQPHRKPPIHNRK 460
           K + RSMLGS+  + +E + S+E           YAQPHRKPPIHN+K
Sbjct: 135 KGRGRSMLGSTANDTEEAVRSEENDIAEDVAVMDYAQPHRKPPIHNKK 182


Top