BLASTX nr result
ID: Bupleurum21_contig00024022
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00024022 (291 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN59909.1| hypothetical protein VITISV_037479 [Vitis vinifera] 58 2e-14 gb|ABK22750.1| unknown [Picea sitchensis] gi|224286467|gb|ACN409... 56 3e-14 gb|ACF85395.1| unknown [Zea mays] 52 8e-12 ref|XP_002302198.1| predicted protein [Populus trichocarpa] gi|2... 72 6e-11 ref|XP_002300944.1| predicted protein [Populus trichocarpa] gi|2... 72 6e-11 >emb|CAN59909.1| hypothetical protein VITISV_037479 [Vitis vinifera] Length = 249 Score = 57.8 bits (138), Expect(2) = 2e-14 Identities = 27/37 (72%), Positives = 31/37 (83%) Frame = +2 Query: 179 FSVIMYGPLLSVMRMVLKTRSVEYMSFFLSLCSFLCG 289 FS+IMY LS+MRMV+KT+SVEYM FFLSL FLCG Sbjct: 141 FSIIMYASPLSIMRMVIKTKSVEYMPFFLSLFVFLCG 177 Score = 46.2 bits (108), Expect(2) = 2e-14 Identities = 23/40 (57%), Positives = 28/40 (70%), Gaps = 1/40 (2%) Frame = +1 Query: 67 EISGLMI-VLTIFGTVALVSMFALHHQNRNVFCGFAAAIF 183 +I GL I VL++FG V VS+FALH R +FCG AA IF Sbjct: 102 KILGLFIFVLSVFGVVVFVSLFALHGHGRKLFCGLAATIF 141 >gb|ABK22750.1| unknown [Picea sitchensis] gi|224286467|gb|ACN40940.1| unknown [Picea sitchensis] Length = 260 Score = 56.2 bits (134), Expect(2) = 3e-14 Identities = 25/37 (67%), Positives = 30/37 (81%) Frame = +2 Query: 179 FSVIMYGPLLSVMRMVLKTRSVEYMSFFLSLCSFLCG 289 FS+ MY LS+MR V+KT+SV+YM FFLSLC FLCG Sbjct: 138 FSICMYASPLSIMRTVIKTKSVKYMPFFLSLCVFLCG 174 Score = 47.0 bits (110), Expect(2) = 3e-14 Identities = 23/35 (65%), Positives = 26/35 (74%) Frame = +1 Query: 79 LMIVLTIFGTVALVSMFALHHQNRNVFCGFAAAIF 183 L+IVL F VALVS+ ALH R +FCGFAAAIF Sbjct: 104 LVIVLKFFALVALVSLLALHGHARKLFCGFAAAIF 138 >gb|ACF85395.1| unknown [Zea mays] Length = 167 Score = 51.6 bits (122), Expect(2) = 8e-12 Identities = 23/37 (62%), Positives = 29/37 (78%) Frame = +2 Query: 179 FSVIMYGPLLSVMRMVLKTRSVEYMSFFLSLCSFLCG 289 FS+ MY LS+MR+V+KT+SVE+M F LSL FLCG Sbjct: 39 FSICMYASPLSIMRLVIKTKSVEFMPFLLSLAVFLCG 75 Score = 43.1 bits (100), Expect(2) = 8e-12 Identities = 22/35 (62%), Positives = 24/35 (68%) Frame = +1 Query: 79 LMIVLTIFGTVALVSMFALHHQNRNVFCGFAAAIF 183 L IV +IF TV LVS+ ALH R VFCG AA IF Sbjct: 5 LGIVASIFTTVVLVSLLALHGNARKVFCGLAATIF 39 >ref|XP_002302198.1| predicted protein [Populus trichocarpa] gi|222843924|gb|EEE81471.1| predicted protein [Populus trichocarpa] Length = 244 Score = 71.6 bits (174), Expect = 6e-11 Identities = 47/109 (43%), Positives = 62/109 (56%), Gaps = 13/109 (11%) Frame = +2 Query: 2 NNILVTVVNGTGAV-----------FAPKKEKMRFLDS*SS--SQYSALLP*SPCLRSII 142 NNILV+ +NGTGAV +APKKEK +F+ + + ++ + S + Sbjct: 59 NNILVSTINGTGAVIEAVYVLTFIIYAPKKEKAKFIGLLTLVLTTFAGVALVSLVVLHGK 118 Query: 143 RTATFSVVLQLQFSVIMYGPLLSVMRMVLKTRSVEYMSFFLSLCSFLCG 289 F FS+IMYG LS+MR V+KT+SVEYM FFLSL FLCG Sbjct: 119 PREIFCGFAAAIFSIIMYGSPLSIMRTVVKTKSVEYMPFFLSLFVFLCG 167 >ref|XP_002300944.1| predicted protein [Populus trichocarpa] gi|222842670|gb|EEE80217.1| predicted protein [Populus trichocarpa] Length = 250 Score = 71.6 bits (174), Expect = 6e-11 Identities = 47/109 (43%), Positives = 62/109 (56%), Gaps = 13/109 (11%) Frame = +2 Query: 2 NNILVTVVNGTGAV-----------FAPKKEKMRFLDS*SS--SQYSALLP*SPCLRSII 142 NNILV+ +NGTGAV +APKKEK +F+ + + ++ + S + Sbjct: 65 NNILVSTINGTGAVIEAVYVLTFIIYAPKKEKAKFIGLLTLVLTTFAGVALVSLVVLHGK 124 Query: 143 RTATFSVVLQLQFSVIMYGPLLSVMRMVLKTRSVEYMSFFLSLCSFLCG 289 F FS+IMYG LS+MR V+KT+SVEYM FFLSL FLCG Sbjct: 125 PREIFCGFAAAIFSIIMYGSPLSIMRTVVKTKSVEYMPFFLSLFVFLCG 173