BLASTX nr result
ID: Bupleurum21_contig00024018
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00024018 (2134 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002518660.1| terminal deoxycytidyl transferase rev1, puta... 684 0.0 ref|XP_004137093.1| PREDICTED: DNA repair protein REV1-like [Cuc... 646 0.0 ref|XP_002313880.1| predicted protein [Populus trichocarpa] gi|2... 630 e-178 ref|XP_002865327.1| polymerase ATREV1-1105 [Arabidopsis lyrata s... 625 e-176 ref|XP_003516774.1| PREDICTED: DNA repair protein REV1-like [Gly... 623 e-176 >ref|XP_002518660.1| terminal deoxycytidyl transferase rev1, putative [Ricinus communis] gi|223542041|gb|EEF43585.1| terminal deoxycytidyl transferase rev1, putative [Ricinus communis] Length = 1200 Score = 684 bits (1766), Expect = 0.0 Identities = 373/629 (59%), Positives = 440/629 (69%), Gaps = 53/629 (8%) Frame = +3 Query: 405 HSTLEDPNFVENYFKYSRLHFIGTWRNCYRKRFPT-SSGFKGTSSSLNAGATSKTAAIVH 581 HSTLEDPNFVENYFK SRLHFIGTWRN YRKRFP SS F+ S +++A S I+H Sbjct: 309 HSTLEDPNFVENYFKSSRLHFIGTWRNRYRKRFPRLSSDFRCRSLTIDASDNSHKTVIMH 368 Query: 582 VDMDCFFVSVVIRNHPELQDKPVAVCHSDNPRGTAEISSANYPARAYGVKAGIFVRDAKS 761 VDMDCFFVSVVIRNHPEL DKPVAVCHSDNP+GTAEISSANYPARAYG+KAGIFVRDAK+ Sbjct: 369 VDMDCFFVSVVIRNHPELHDKPVAVCHSDNPKGTAEISSANYPARAYGIKAGIFVRDAKA 428 Query: 762 ICPDLVIVPYNFEAYEEVADQFYDILHKHCNKVQAVSCDEAFLDVTDSEVKDHQRLASII 941 +CP L+I PYNF+AYEEVADQFY++LHKHCNKVQAVSCDEAFLD+TD D + LAS I Sbjct: 429 LCPQLIIFPYNFQAYEEVADQFYNVLHKHCNKVQAVSCDEAFLDITDFSGGDPEVLASTI 488 Query: 942 RKEVFDTTGCKASVGIAGNMLMARLATRTAKPDGQCYISADMVEEYLDELPIKALPGIGH 1121 RKE+F+TTGC AS GIA NML++RLATRTAKPDGQCYI + V+EYL+EL IK LPGIGH Sbjct: 489 RKEIFETTGCTASAGIARNMLLSRLATRTAKPDGQCYIRPEKVDEYLNELSIKTLPGIGH 548 Query: 1122 VLEDKLKRREVQTCKQLRLISK-------------------------------ESKSIGA 1208 VLE+KLK++ V+TC QLRLISK ESKSIGA Sbjct: 549 VLEEKLKKKNVRTCGQLRLISKDSLHKDFGKKTGEMLWNYSRGIDNRLVGVIQESKSIGA 608 Query: 1209 EVNWGVRFNNFEDCKHFLLNVCKEVSLRLQGGGVQGRNFTLKVKKRKNEAREPVKYMGCG 1388 EVNWGVRF N +D +HFLLN+CKEVSLRLQG GV GR FTLK+KKR+ +A EP KYMGCG Sbjct: 609 EVNWGVRFRNLQDSQHFLLNLCKEVSLRLQGCGVHGRTFTLKIKKRRKDAGEPTKYMGCG 668 Query: 1389 ECDNLSHSITVPMATDDVDVLQRIAMKLFGSFNIDVKEIRGMGLQVSKLENADSCHQGNK 1568 +C+NLSHS+TVP+ATDDVDVLQRIA +LFGSFN+DVKEIRG+GLQVSKLENAD +G + Sbjct: 669 DCENLSHSMTVPVATDDVDVLQRIAKQLFGSFNLDVKEIRGVGLQVSKLENAD-ISRGLE 727 Query: 1569 RNSLRSWLVSASNSNRDQCEVGSIAKAICKKDLENENAD-GNL--GQSCTALTVGGNLSS 1739 RNSLRSWL SAS ++ + SI+ AD GNL Q+ + + N S+ Sbjct: 728 RNSLRSWLTSASTMTEERHSINSIS---------TRRADSGNLFPHQTGGSAEMNNNFSN 778 Query: 1740 SEDHVNQDSSLPPLCDLDMGVIESLPPDLFSEINSLYGGNLIKFMSKHKGK-HAGSNTGG 1916 E N + P L DLDMGVIESLPP+L SE+N +YGG L+ F++++KGK G + Sbjct: 779 GEASFNHVPAPPRLFDLDMGVIESLPPELVSELNDIYGGKLVDFIAQNKGKSENGRGSSS 838 Query: 1917 IAS----------VEKGTLFASLIPSR-------SCSDGETSTDKEXXXXXXXXXXXXXX 2045 I S V ++SL+ +R SC + + T +E Sbjct: 839 IPSHGQEEEDYLIVSIFKRYSSLLLARITINFCTSCQE-QQHTAEEILLAAPSSGFSSND 897 Query: 2046 XXXXXXXXEQNYVMPSSLSQVDVSVLHQL 2132 +MPSSLSQVD SVL QL Sbjct: 898 GSTHTLGLGNTDLMPSSLSQVDTSVLQQL 926 >ref|XP_004137093.1| PREDICTED: DNA repair protein REV1-like [Cucumis sativus] Length = 1155 Score = 646 bits (1666), Expect = 0.0 Identities = 348/619 (56%), Positives = 428/619 (69%), Gaps = 43/619 (6%) Frame = +3 Query: 405 HSTLEDPNFVENYFKYSRLHFIGTWRNCYRKRFPT-SSGFKGTSSSLNAGATSKTAAIVH 581 HSTLE+P+FVENYFK SRLHFIGTWRN Y KRFP ++G +S +N + ++A I+H Sbjct: 375 HSTLENPDFVENYFKKSRLHFIGTWRNRYYKRFPRLANGSNSVTSPINGSSHDQSATIIH 434 Query: 582 VDMDCFFVSVVIRNHPELQDKPVAVCHSDNPRGTAEISSANYPARAYGVKAGIFVRDAKS 761 VDMDCFFVSVVIRN P+ +D+PVAVCHSDNP+GTAEISSANYPAR+YGVKAG+FVRDAK+ Sbjct: 435 VDMDCFFVSVVIRNIPKFKDRPVAVCHSDNPKGTAEISSANYPARSYGVKAGMFVRDAKA 494 Query: 762 ICPDLVIVPYNFEAYEEVADQFYDILHKHCNKVQAVSCDEAFLDVTDSEVKDHQRLASII 941 +CP LVI PY+F++YE VADQFYDILHKHC KVQAVSCDEAFLD++ + D + LAS I Sbjct: 495 LCPHLVIFPYDFKSYEGVADQFYDILHKHCEKVQAVSCDEAFLDISGTNNVDPEVLASKI 554 Query: 942 RKEVFDTTGCKASVGIAGNMLMARLATRTAKPDGQCYISADMVEEYLDELPIKALPGIGH 1121 RKE+FDTTGC AS GIA NMLMARLAT+TAKPDGQCYI + V++YL+ LPIK LPGIGH Sbjct: 555 RKEIFDTTGCTASAGIATNMLMARLATKTAKPDGQCYIPLEKVDDYLNPLPIKDLPGIGH 614 Query: 1122 VLEDKLKRREVQTCKQLRLISK-------------------------------ESKSIGA 1208 LE+KLK+R V TC QLR++SK ESKSIGA Sbjct: 615 ALEEKLKKRSVLTCSQLRMLSKDSLQKDFGLKTGEMLWNYSRGVDNRAVGLIQESKSIGA 674 Query: 1209 EVNWGVRFNNFEDCKHFLLNVCKEVSLRLQGGGVQGRNFTLKVKKRKNEAREPVKYMGCG 1388 EVNWGVRF +F+DC+ FLLN+CKEVSLRL G GVQGR FTLK+KKR+ A EP KYMGCG Sbjct: 675 EVNWGVRFKDFKDCQCFLLNLCKEVSLRLNGCGVQGRTFTLKIKKRRKNADEPTKYMGCG 734 Query: 1389 ECDNLSHSITVPMATDDVDVLQRIAMKLFGSFNIDVKEIRGMGLQVSKLENADSCHQGNK 1568 +C+NLSHS+TVP+ATDD+++LQRI +LFG F IDVKEIRG+GLQVSKL+N D QG K Sbjct: 735 DCENLSHSLTVPVATDDLEILQRIVKQLFGFFVIDVKEIRGIGLQVSKLQNVDISRQGTK 794 Query: 1569 RNSLRSWLVSASNSNRDQCEVGSIAKAICKKDLENENADGNLGQ-SCTALTVGGNLSSSE 1745 RNSL SWL S++ +N + +G K + D E ++ G L Q S ++ + ++ Sbjct: 795 RNSLDSWLSSSATTNVENV-IGPSVKEVANIDNEKQSNSGTLDQLSADPISHLIQMENNR 853 Query: 1746 DHVN--QDSSLPPLCDLDMGVIESLPPDLFSEINSLYGGNLIKFMSKHKGKHAGSNTGGI 1919 H S PPLC+LD+GVI SLPP+LFSE+N +YGG LI +SK Sbjct: 854 HHSEALNPVSPPPLCNLDIGVIRSLPPELFSELNEIYGGKLIDLLSK------------- 900 Query: 1920 ASVEKGTLFASLI--PSR-SCSDGETSTDKEXXXXXXXXXXXXXXXXXXXXXXEQN---- 2078 S +K +F+S I PS+ S DG T +D + + Sbjct: 901 -SRDKNEVFSSSIRVPSQGSGGDGLTLSDIQGNKVQSENKISREGLYTMMAPISTSGSHR 959 Query: 2079 -YVMPSSLSQVDVSVLHQL 2132 ++PSSLSQVD SVL +L Sbjct: 960 IDLLPSSLSQVDPSVLQEL 978 >ref|XP_002313880.1| predicted protein [Populus trichocarpa] gi|222850288|gb|EEE87835.1| predicted protein [Populus trichocarpa] Length = 1191 Score = 630 bits (1624), Expect = e-178 Identities = 343/607 (56%), Positives = 414/607 (68%), Gaps = 43/607 (7%) Frame = +3 Query: 441 YFKYSRLHFIGTWRNCYRKRFPTSSG-FKGTSSSLNAGATSKTAAIVHVDMDCFFVSVVI 617 + + SRLHFIGTWR+ YRKRFP+SS FK SS LN S + I+HVDMDCFFVSVVI Sbjct: 396 FLQSSRLHFIGTWRSRYRKRFPSSSSEFKCRSSDLNTSDNSNKSTIIHVDMDCFFVSVVI 455 Query: 618 RNHPELQDKPVAVCHSDNPRGTAEISSANYPARAYGVKAGIFVRDAKSICPDLVIVPYNF 797 RNHPEL DKPVAVCHSDNP+GTAEISSANYPAR YGVKAGIFVRDAK++CP LVI PYNF Sbjct: 456 RNHPELHDKPVAVCHSDNPKGTAEISSANYPARNYGVKAGIFVRDAKALCPQLVIFPYNF 515 Query: 798 EAYEEVADQFYDILHKHCNKVQAVSCDEAFLDVTDSEVKDHQRLASIIRKEVFDTTGCKA 977 +AYEEVADQ Y+ILHKHC+KVQA+SCDEAFLD+T+ ++ D + LAS IRKE+FDTTGC A Sbjct: 516 KAYEEVADQLYNILHKHCHKVQAISCDEAFLDITEKDMGDPELLASTIRKEIFDTTGCTA 575 Query: 978 SVGIAGNMLMARLATRTAKPDGQCYISADMVEEYLDELPIKALPGIGHVLEDKLKRREVQ 1157 S GIAGNMLMARLATR+AKP+GQCYI + V+EYL +LPIKALPGIGHVLE+KLK++ V Sbjct: 576 SAGIAGNMLMARLATRSAKPNGQCYIPSVSVDEYLHKLPIKALPGIGHVLEEKLKKQNVW 635 Query: 1158 TCKQLRLISK-------------------------------ESKSIGAEVNWGVRFNNFE 1244 TC QLRLISK ESK+IGAEVNWGVRF + + Sbjct: 636 TCGQLRLISKESLQKDFGLKTGEMLWNYSRGVDNRLVGNIQESKTIGAEVNWGVRFKDLQ 695 Query: 1245 DCKHFLLNVCKEVSLRLQGGGVQGRNFTLKVKKRKNEAREPVKYMGCGECDNLSHSITVP 1424 D + FLLN+CKEVS RLQG VQGR FTLK+KKR+ +A EP KYMGCG+C+NLSHS+TVP Sbjct: 696 DSQCFLLNLCKEVSFRLQGCRVQGRTFTLKIKKRRKDAGEPAKYMGCGDCENLSHSMTVP 755 Query: 1425 MATDDVDVLQRIAMKLFGSFNIDVKEIRGMGLQVSKLENADSCHQGNKRNSLRSWLVSAS 1604 +A DDV+ LQRI +LFGSF +DVK+IRG+GLQVSKLENAD Q +RNSLRSWL S+S Sbjct: 756 IAIDDVEALQRITKQLFGSFCLDVKDIRGVGLQVSKLENADPSKQVLERNSLRSWLTSSS 815 Query: 1605 NSNRDQCEVGSIAKAICKKDLENENADGNLGQSCTALTVGGNLSSSEDHVNQDSSLPPLC 1784 + C + S+ K + D E +N G GQ T G + + + S+ PPL Sbjct: 816 ATTEKGCSINSMDKERARIDSEVKNMIGTSGQLFPDQT-GFSAQVDTNSSSGISAPPPLS 874 Query: 1785 DLDMGVIESLPPDLFSEINSLYGGNLIKFMSKHKGKHAGSNT--------GGIASVE--K 1934 LDMGV++SLP +LFSE+N +YGG L F++K N+ G +V+ + Sbjct: 875 HLDMGVVKSLPAELFSELNEIYGGKLTDFIAKSSVASENINSYPSTPSAEGQELAVDGGE 934 Query: 1935 GTLFASLIPSRSCSDGETSTDKEXXXXXXXXXXXXXXXXXXXXXXEQNY-VMPSSLSQVD 2111 G L +++IP + N +MP SLSQVD Sbjct: 935 GPLASNMIPLDFVMVENRAKQHMIEEAQAAPSGAGLQNEAISSVSPNNTDLMPLSLSQVD 994 Query: 2112 VSVLHQL 2132 VSVL QL Sbjct: 995 VSVLQQL 1001 >ref|XP_002865327.1| polymerase ATREV1-1105 [Arabidopsis lyrata subsp. lyrata] gi|297311162|gb|EFH41586.1| polymerase ATREV1-1105 [Arabidopsis lyrata subsp. lyrata] Length = 1105 Score = 625 bits (1611), Expect = e-176 Identities = 338/612 (55%), Positives = 410/612 (66%), Gaps = 36/612 (5%) Frame = +3 Query: 405 HSTLEDPNFVENYFKYSRLHFIGTWRNCYRKRFP-TSSGFKGTSSSLNAGATSKTAAIVH 581 HSTLEDPNFVENYFK SRLHFIGTWRN YRKRF S+G K S N K + I+H Sbjct: 318 HSTLEDPNFVENYFKNSRLHFIGTWRNRYRKRFHGPSNGLKWADSGQNTAEMDKKSTIIH 377 Query: 582 VDMDCFFVSVVIRNHPELQDKPVAVCHSDNPRGTAEISSANYPARAYGVKAGIFVRDAKS 761 +D+DCFFVSVVI+N EL DKPVAVCHSDNP+GTAEISSANYPARAYGVKAG+FVR AK Sbjct: 378 IDLDCFFVSVVIKNRLELHDKPVAVCHSDNPKGTAEISSANYPARAYGVKAGMFVRHAKE 437 Query: 762 ICPDLVIVPYNFEAYEEVADQFYDILHKHCNKVQAVSCDEAFLDVTDSEVKDHQRLASII 941 +CP LVIVPYNFEAYEEVADQFYDILH+HC KVQA+SCDEAFLDV+D + LAS I Sbjct: 438 LCPQLVIVPYNFEAYEEVADQFYDILHRHCRKVQALSCDEAFLDVSDLRDVEPGFLASTI 497 Query: 942 RKEVFDTTGCKASVGIAGNMLMARLATRTAKPDGQCYISADMVEEYLDELPIKALPGIGH 1121 R E+ +TTGC AS GI G MLMARLATR AKP GQ YISA+ VEE+LD LP+ LPG+G Sbjct: 498 RNEILETTGCSASAGIGGTMLMARLATRVAKPAGQLYISAEKVEEFLDGLPVGTLPGVGS 557 Query: 1122 VLEDKLKRREVQTCKQLRLISK-------------------------------ESKSIGA 1208 VL++KL ++ +QTC QLRLISK ESKSIGA Sbjct: 558 VLKEKLVKQNIQTCGQLRLISKDSLQKDFGVKTGEMLWSYSRGLDLRSVTAVQESKSIGA 617 Query: 1209 EVNWGVRFNNFED----CKHFLLNVCKEVSLRLQGGGVQGRNFTLKVKKRKNEAREPVKY 1376 EVNWGVRF + +D +HFL +CKEVSLRLQG + GR FTLK+KKRKN+A EP KY Sbjct: 618 EVNWGVRFRDQQDVCILVQHFLQCLCKEVSLRLQGCEMIGRTFTLKIKKRKNDAEEPTKY 677 Query: 1377 MGCGECDNLSHSITVPMATDDVDVLQRIAMKLFGSFNIDVKEIRGMGLQVSKLENADSCH 1556 MGCG+CDNLS SITVP ATDDV+VLQRI+ KLFGSF +DVKE+RG+GLQVSKL++AD + Sbjct: 678 MGCGDCDNLSRSITVPAATDDVEVLQRISKKLFGSFCLDVKEVRGVGLQVSKLDSADPSN 737 Query: 1557 QGNKRNSLRSWLVSASNSNRDQCEVGSIAKAICKKDLENENADGNLGQSCTALTVGGNLS 1736 +G++ +L+SWL SAS S ++ K EN + + ++ + L + Sbjct: 738 KGSR--TLKSWLSSASAS----VQIEQDDNVFAAKVRENSDCNRHVTGGVSILRESNSAE 791 Query: 1737 SSEDHVNQDSSLPPLCDLDMGVIESLPPDLFSEINSLYGGNLIKFMSKHKGKHAGSNTGG 1916 SS + +SSLPP+C LDM V+E+LPP+L SE++ YGG L + + K +GK ++ Sbjct: 792 SSIQSGDTNSSLPPMCHLDMEVLENLPPELLSELDGTYGGKLFELIEKKRGKRKINSNSP 851 Query: 1917 IASVEKGTLFASLIPSRSCSDGETSTDKEXXXXXXXXXXXXXXXXXXXXXXEQNYVMPSS 2096 S++ + S S ST +E E +MPSS Sbjct: 852 HVSLDGTAASIKELKSLSVKIHGLSTSREKEYKEPYVPHPSIARTSNQRTIEMTDLMPSS 911 Query: 2097 LSQVDVSVLHQL 2132 LSQVDVSVL +L Sbjct: 912 LSQVDVSVLQEL 923 >ref|XP_003516774.1| PREDICTED: DNA repair protein REV1-like [Glycine max] Length = 1115 Score = 623 bits (1607), Expect = e-176 Identities = 324/623 (52%), Positives = 422/623 (67%), Gaps = 47/623 (7%) Frame = +3 Query: 405 HSTLEDPNFVENYFKYSRLHFIGTWRNCYRKRFPT-SSGFKGTSSSLNAGATSKTAAIVH 581 HSTL DPNFVENYFK SRLHFIGTWRN YRKRFPT S+GF S++ +A S + I+H Sbjct: 323 HSTLADPNFVENYFKSSRLHFIGTWRNRYRKRFPTLSTGFNNESANNSASDISHNSVIIH 382 Query: 582 VDMDCFFVSVVIRNHPELQDKPVAVCHSDNPRGTAEISSANYPARAYGVKAGIFVRDAKS 761 VDMDCFFVSVVIRNHPEL +PVAVCHS+N GTAEISSANYPAR++G++AG+FVRDAK+ Sbjct: 383 VDMDCFFVSVVIRNHPELLGQPVAVCHSNNSNGTAEISSANYPARSHGIRAGMFVRDAKA 442 Query: 762 ICPDLVIVPYNFEAYEEVADQFYDILHKHCNKVQAVSCDEAFLDVTDSEVKDHQRLASII 941 +CP LVI PYNFEAYEEVADQFY ILH+ C KVQAVSCDEAFLD TDSEV+D + LAS I Sbjct: 443 LCPHLVIFPYNFEAYEEVADQFYSILHQRCKKVQAVSCDEAFLDATDSEVEDPELLASSI 502 Query: 942 RKEVFDTTGCKASVGIAGNMLMARLATRTAKPDGQCYISADMVEEYLDELPIKALPGIGH 1121 R+E++ TTGC AS GIAGNMLMAR+ATRTAKP+GQ +I+ + VE++L +LPI ALPGIG+ Sbjct: 503 REEIYKTTGCTASAGIAGNMLMARIATRTAKPNGQYHITTEKVEDHLCQLPINALPGIGY 562 Query: 1122 VLEDKLKRREVQTCKQLRLISK-------------------------------ESKSIGA 1208 VL++KLK++ V TC QLR+ISK ESKS+GA Sbjct: 563 VLQEKLKKQNVHTCGQLRMISKASLQKDYGMKTGEMLWIYSRGIDNRLVGGFQESKSVGA 622 Query: 1209 EVNWGVRFNNFEDCKHFLLNVCKEVSLRLQGGGVQGRNFTLKVKKRKNEAREPVKYMGCG 1388 +VNWGVRF + +DC+HFL+N+CKEVSLRLQG GVQGR FTLK+KKR+ A EP K+MGCG Sbjct: 623 DVNWGVRFKDIKDCEHFLINLCKEVSLRLQGCGVQGRTFTLKIKKRRKNADEPAKFMGCG 682 Query: 1389 ECDNLSHSITVPMATDDVDVLQRIAMKLFGSFNIDVKEIRGMGLQVSKLENADSCHQGNK 1568 +C+NLSHS+T+P+ATD+V++LQRI +L G F IDVKEIRG+GL VS+LE+A++ QG Sbjct: 683 DCENLSHSVTIPVATDNVEILQRIVKQLLGCFYIDVKEIRGIGLHVSRLESAEASKQGTV 742 Query: 1569 RNSLRSWLVSASNSNRDQCEVGSIAKAICKKDLENENADGNLGQSC-----TALTVGGNL 1733 + +L+SWL S SI + +N D ++C +++ + + Sbjct: 743 KYTLKSWLTSG---------YASIENQKYPMGHDKQNRDSTCSRACRDLPGSSVEMDNKI 793 Query: 1734 SSSEDHVNQDSSLPPLCDLDMGVIESLPPDLFSEINSLYGGNLIKFMSKHKGKHAGSNTG 1913 +++ N S+ PPLC+LD+ VI +LPP++FSE+N +YGG LI +++ K S+ Sbjct: 794 PNNQASTNPISTPPPLCNLDVEVIRNLPPEVFSELNEIYGGKLIDYIANSKSTSENSSPS 853 Query: 1914 GIASVEKG------TLFASLIPSRSCSDGETSTDKE----XXXXXXXXXXXXXXXXXXXX 2063 G + +E+ ++ +P + + E Sbjct: 854 GNSFLEQAIKKEEELSYSKPVPQNNPLSKNKAKQNEAGTGEGEAVPYSVCGPYFKVTHHS 913 Query: 2064 XXEQNYVMPSSLSQVDVSVLHQL 2132 E++ ++PSS SQVD SV QL Sbjct: 914 SFEKDDLLPSSFSQVDGSVFQQL 936