BLASTX nr result

ID: Bupleurum21_contig00024008 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024008
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE72071.1| Cyclin B1-3 [Daucus carota]                            71   1e-10
gb|AAC41681.1| mitotic cyclin [Petroselinum crispum]                   70   2e-10
dbj|BAE72072.1| Cyclin B1-4 [Daucus carota]                            67   2e-09
dbj|BAA20411.1| B-type cyclin [Catharanthus roseus]                    64   1e-08
dbj|BAA20413.1| B-type cyclin [Catharanthus roseus]                    64   1e-08

>dbj|BAE72071.1| Cyclin B1-3 [Daucus carota]
          Length = 444

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 37/48 (77%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
 Frame = +3

Query: 48  G*EAVKQKNMAEGEGRIRRALGDIGNFVTVSGIDGK-QKVPQVSRPVT 188
           G EAVKQKNMA GEGR RRALGDIGN VTV GI+GK Q++P+V RPVT
Sbjct: 16  GEEAVKQKNMAAGEGRNRRALGDIGNLVTVHGIEGKQQQIPRVIRPVT 63


>gb|AAC41681.1| mitotic cyclin [Petroselinum crispum]
          Length = 443

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 39/55 (70%), Positives = 43/55 (78%), Gaps = 1/55 (1%)
 Frame = +3

Query: 30  NS*KALG*EAVKQKNMAEGEGRIRRALGDIGNFVTVSGIDGK-QKVPQVSRPVTR 191
           N  +A G  AVKQKNMA  EGR RRALGDIGN VT  GI+GK Q++PQVSRPVTR
Sbjct: 10  NRVEAAGGGAVKQKNMAAVEGRNRRALGDIGNLVTGHGIEGKQQQIPQVSRPVTR 64


>dbj|BAE72072.1| Cyclin B1-4 [Daucus carota]
          Length = 455

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 36/46 (78%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
 Frame = +3

Query: 57  AVKQKNMAEGEGRIRRALGDIGNFVTVSGIDG-KQKVPQVSRPVTR 191
           AVK KNMA GE R RRALGDIGN VTV GIDG KQ +PQ SRPVTR
Sbjct: 18  AVKPKNMAGGEVRNRRALGDIGNLVTVRGIDGKKQPIPQASRPVTR 63


>dbj|BAA20411.1| B-type cyclin [Catharanthus roseus]
          Length = 436

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 33/44 (75%), Positives = 39/44 (88%)
 Frame = +3

Query: 60  VKQKNMAEGEGRIRRALGDIGNFVTVSGIDGKQKVPQVSRPVTR 191
           +KQKNMA GEG+IRRALGDIGN VTV G++GK  +PQVSRP+TR
Sbjct: 21  MKQKNMA-GEGKIRRALGDIGNLVTVRGVEGK-PLPQVSRPITR 62


>dbj|BAA20413.1| B-type cyclin [Catharanthus roseus]
          Length = 186

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 33/44 (75%), Positives = 39/44 (88%)
 Frame = +3

Query: 60  VKQKNMAEGEGRIRRALGDIGNFVTVSGIDGKQKVPQVSRPVTR 191
           +KQKNMA GEG+IRRALGDIGN VTV G++GK  +PQVSRP+TR
Sbjct: 21  MKQKNMA-GEGKIRRALGDIGNLVTVRGVEGK-PLPQVSRPITR 62


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