BLASTX nr result

ID: Bupleurum21_contig00024005 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024005
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556021.1| PREDICTED: WD repeat-containing protein 25-l...   133   1e-29
ref|XP_003541035.1| PREDICTED: LOW QUALITY PROTEIN: WD repeat-co...   132   4e-29
emb|CBI20464.3| unnamed protein product [Vitis vinifera]              132   4e-29
ref|XP_002280346.1| PREDICTED: WD repeat-containing protein 25-l...   132   4e-29
emb|CAN83694.1| hypothetical protein VITISV_013363 [Vitis vinifera]   132   4e-29

>ref|XP_003556021.1| PREDICTED: WD repeat-containing protein 25-like [Glycine max]
          Length = 359

 Score =  133 bits (335), Expect = 1e-29
 Identities = 57/84 (67%), Positives = 69/84 (82%)
 Frame = +3

Query: 3   GMDHTICIWNPWSTKEKKARVLCHHTAAVKDVKWSQMGLYVLSCGYDCSSRLFDIEKNLE 182
           GMDH +CIWN WS  +KKA VL  H AAVKDVKWSQ G ++LSCGYDC+SRL D+EK LE
Sbjct: 82  GMDHAVCIWNVWSRNQKKACVLNFHNAAVKDVKWSQQGHFLLSCGYDCTSRLIDVEKGLE 141

Query: 183 THILKEDQVVGVVKFHPNNFNLFV 254
           T + +EDQ+VGV+KFHP+N NLF+
Sbjct: 142 TQVFREDQIVGVIKFHPDNSNLFL 165


>ref|XP_003541035.1| PREDICTED: LOW QUALITY PROTEIN: WD repeat-containing protein
           25-like [Glycine max]
          Length = 417

 Score =  132 bits (331), Expect = 4e-29
 Identities = 56/84 (66%), Positives = 68/84 (80%)
 Frame = +3

Query: 3   GMDHTICIWNPWSTKEKKARVLCHHTAAVKDVKWSQMGLYVLSCGYDCSSRLFDIEKNLE 182
           GMDH +CIWN W   +KKA VL  H AAVKDVKWSQ G ++LSCGYDC+SRL D+EK LE
Sbjct: 140 GMDHAVCIWNVWGRNQKKACVLNFHNAAVKDVKWSQQGHFLLSCGYDCTSRLIDVEKGLE 199

Query: 183 THILKEDQVVGVVKFHPNNFNLFV 254
           T + +EDQ+VGV+KFHP+N NLF+
Sbjct: 200 TRVFREDQIVGVIKFHPDNSNLFL 223


>emb|CBI20464.3| unnamed protein product [Vitis vinifera]
          Length = 506

 Score =  132 bits (331), Expect = 4e-29
 Identities = 59/84 (70%), Positives = 66/84 (78%)
 Frame = +3

Query: 3   GMDHTICIWNPWSTKEKKARVLCHHTAAVKDVKWSQMGLYVLSCGYDCSSRLFDIEKNLE 182
           GMDH ICIWN WS  +KKAR   +H AAVKDVKW Q GL VLSCGYDCSSRL D+EK L+
Sbjct: 229 GMDHAICIWNAWSRDQKKAREFSYHNAAVKDVKWLQQGLSVLSCGYDCSSRLIDVEKGLQ 288

Query: 183 THILKEDQVVGVVKFHPNNFNLFV 254
           T I  EDQVVGV+K HP+N NLF+
Sbjct: 289 TQIFTEDQVVGVIKLHPDNSNLFL 312


>ref|XP_002280346.1| PREDICTED: WD repeat-containing protein 25-like [Vitis vinifera]
          Length = 418

 Score =  132 bits (331), Expect = 4e-29
 Identities = 59/84 (70%), Positives = 66/84 (78%)
 Frame = +3

Query: 3   GMDHTICIWNPWSTKEKKARVLCHHTAAVKDVKWSQMGLYVLSCGYDCSSRLFDIEKNLE 182
           GMDH ICIWN WS  +KKAR   +H AAVKDVKW Q GL VLSCGYDCSSRL D+EK L+
Sbjct: 141 GMDHAICIWNAWSRDQKKAREFSYHNAAVKDVKWLQQGLSVLSCGYDCSSRLIDVEKGLQ 200

Query: 183 THILKEDQVVGVVKFHPNNFNLFV 254
           T I  EDQVVGV+K HP+N NLF+
Sbjct: 201 TQIFTEDQVVGVIKLHPDNSNLFL 224


>emb|CAN83694.1| hypothetical protein VITISV_013363 [Vitis vinifera]
          Length = 297

 Score =  132 bits (331), Expect = 4e-29
 Identities = 59/84 (70%), Positives = 66/84 (78%)
 Frame = +3

Query: 3   GMDHTICIWNPWSTKEKKARVLCHHTAAVKDVKWSQMGLYVLSCGYDCSSRLFDIEKNLE 182
           GMDH ICIWN WS  +KKAR   +H AAVKDVKW Q GL VLSCGYDCSSRL D+EK L+
Sbjct: 20  GMDHAICIWNAWSRDQKKAREFSYHNAAVKDVKWLQQGLSVLSCGYDCSSRLIDVEKGLQ 79

Query: 183 THILKEDQVVGVVKFHPNNFNLFV 254
           T I  EDQVVGV+K HP+N NLF+
Sbjct: 80  TQIFTEDQVVGVIKLHPDNSNLFL 103


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