BLASTX nr result

ID: Bupleurum21_contig00023193 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023193
         (824 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72897.1| hypothetical protein VITISV_003776 [Vitis vinifera]   210   3e-52
emb|CAN78580.1| hypothetical protein VITISV_013552 [Vitis vinifera]   209   5e-52
emb|CAN79085.1| hypothetical protein VITISV_027044 [Vitis vinifera]   209   8e-52
gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsi...   209   8e-52
emb|CAN78757.1| hypothetical protein VITISV_035650 [Vitis vinifera]   208   1e-51

>emb|CAN72897.1| hypothetical protein VITISV_003776 [Vitis vinifera]
          Length = 959

 Score =  210 bits (535), Expect = 3e-52
 Identities = 103/223 (46%), Positives = 140/223 (62%), Gaps = 1/223 (0%)
 Frame = -2

Query: 820  RSLISDNGTQFVSKDFESFLEKYHITHKKSSVAHPQSNGQVEVTNRSLLETLKKRLEDAK 641
            +++I+DNG QF S  F +F  + +I +  S+  +PQSNGQ E TN++L+ TLKKRLE AK
Sbjct: 737  QTIIADNGPQFDSITFRNFCSELNIRNSYSTPRYPQSNGQAEATNKTLITTLKKRLEQAK 796

Query: 640  GKWAEELPHALWSYRTTPRTSTGETPFKLCYGTEALIPVEVGSPSFRTVNFNEKENNEGI 461
            GKW EELP  LW+YRTTP   TG TPF L YG +A+IP E+G P+ RT    + + N  +
Sbjct: 797  GKWVEELPGVLWAYRTTPGRPTGNTPFALAYGMDAVIPTEIGLPTIRTNAAKQSDANMEL 856

Query: 460  RTNLTLTEELRNKAVEHMKSYKQKTVEYFGKKIRPRQYQEGELVLRAT-EVSDPTNQGKL 284
              NL  T+E+R  A   M  YKQ+   ++ +K+RPR ++ G LVLR   E       GK 
Sbjct: 857  GRNLDWTDEVRENAAIRMVDYKQRASAHYNRKVRPRSFKNGTLVLRKVFENITEVGAGKF 916

Query: 283  TANWEGPYKVSQVIRPGTYKLETLDGNPIQNTWHGLRLRKFYQ 155
             ANWEGPY VS+    G Y L+ LDG P+   W+   L+++YQ
Sbjct: 917  QANWEGPYIVSKASNNGAYHLQKLDGTPLLRPWNVSNLKQYYQ 959


>emb|CAN78580.1| hypothetical protein VITISV_013552 [Vitis vinifera]
          Length = 978

 Score =  209 bits (533), Expect = 5e-52
 Identities = 102/223 (45%), Positives = 142/223 (63%), Gaps = 1/223 (0%)
 Frame = -2

Query: 820  RSLISDNGTQFVSKDFESFLEKYHITHKKSSVAHPQSNGQVEVTNRSLLETLKKRLEDAK 641
            +++I+DNG QF S  F +F  + +I +  S+  +PQSNGQ E TN++L+  LKKRLE AK
Sbjct: 756  QTIIADNGPQFDSIAFRNFCSELNIRNSYSTPRYPQSNGQAEATNKTLIIALKKRLEQAK 815

Query: 640  GKWAEELPHALWSYRTTPRTSTGETPFKLCYGTEALIPVEVGSPSFRTVNFNEKENNEGI 461
            GKW EELP  LW+YRTTP   TG TPF L YG +A+IP E+G P+ RT    + + N  +
Sbjct: 816  GKWVEELPGVLWAYRTTPERPTGNTPFALAYGMDAVIPTEIGLPTIRTDAAKQSDANMEL 875

Query: 460  RTNLTLTEELRNKAVEHMKSYKQKTVEYFGKKIRPRQYQEGELVLRAT-EVSDPTNQGKL 284
              NL  T+E+R  AV  M  Y+Q+   ++ +K+RPR ++ G LVLR   E +   + GK 
Sbjct: 876  GRNLDWTDEVRESAVIRMADYQQRASAHYNRKVRPRAFKNGTLVLRKVFENTTEVSAGKF 935

Query: 283  TANWEGPYKVSQVIRPGTYKLETLDGNPIQNTWHGLRLRKFYQ 155
             ANWEGPY VS+    G Y L+ LDG P+   W+   L+++YQ
Sbjct: 936  QANWEGPYIVSKASNNGAYHLQKLDGTPLLRPWNVSNLKQYYQ 978


>emb|CAN79085.1| hypothetical protein VITISV_027044 [Vitis vinifera]
          Length = 1000

 Score =  209 bits (531), Expect = 8e-52
 Identities = 102/223 (45%), Positives = 140/223 (62%), Gaps = 1/223 (0%)
 Frame = -2

Query: 820  RSLISDNGTQFVSKDFESFLEKYHITHKKSSVAHPQSNGQVEVTNRSLLETLKKRLEDAK 641
            +++I+DNG QF S  F +F  + +I +  S+  +PQSNGQ E TN++L+  LKKRLE AK
Sbjct: 778  QTIIADNGLQFDSIAFRNFCSELNIRNSYSTPRYPQSNGQAEATNKTLINALKKRLEQAK 837

Query: 640  GKWAEELPHALWSYRTTPRTSTGETPFKLCYGTEALIPVEVGSPSFRTVNFNEKENNEGI 461
            GKW EELP  LW+YRTTP   TG TPF L YG +A+IP E+G P+ RT    + + N   
Sbjct: 838  GKWVEELPGVLWAYRTTPGRPTGNTPFALAYGMDAVIPTEIGLPTIRTDAAKQSDANIEF 897

Query: 460  RTNLTLTEELRNKAVEHMKSYKQKTVEYFGKKIRPRQYQEGELVLRAT-EVSDPTNQGKL 284
            R NL  T+E+R  A   M  Y+Q+   ++ +K+RPR ++ G LVLR   E +     GK 
Sbjct: 898  RRNLDWTDEVRESAAIRMADYQQRASAHYNRKVRPRSFKNGTLVLRKVFENTTEVGAGKF 957

Query: 283  TANWEGPYKVSQVIRPGTYKLETLDGNPIQNTWHGLRLRKFYQ 155
             ANWEGPY VS+    G Y L+ LDG P+   W+   L+++YQ
Sbjct: 958  QANWEGPYIVSKANGNGAYHLQKLDGTPLLRPWNVSNLKQYYQ 1000


>gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1787

 Score =  209 bits (531), Expect = 8e-52
 Identities = 102/222 (45%), Positives = 150/222 (67%), Gaps = 3/222 (1%)
 Frame = -2

Query: 814  LISDNGTQFVSKDFESFLEKYHITHKKSSVAHPQSNGQVEVTNRSLLETLKKRLEDAKGK 635
            +++DNGTQF S  FE F  K+ I   KS+  +PQ NGQ E TN+++L+ LKKRL++ KG 
Sbjct: 1565 IVTDNGTQFTSLQFEGFCAKWKIRLSKSTPRYPQCNGQAEATNKTILDGLKKRLDEKKGA 1624

Query: 634  WAEELPHALWSYRTTPRTSTGETPFKLCYGTEALIPVEVGSPSF-RTVNFNEKE-NNEGI 461
            WA+EL   LWSYRTTPR ST  TPF L YG EAL P E G P+  R++  N+   N++ +
Sbjct: 1625 WADELDGVLWSYRTTPRRSTDRTPFSLTYGMEALAPCEAGLPTVRRSMLINDPTLNDQML 1684

Query: 460  RTNLTLTEELRNKAVEHMKSYKQKTVEYFGKKIRPRQYQEGELVLRAT-EVSDPTNQGKL 284
              NL   EE R++A+  +++Y+Q   +++ KK++ R + EG+LVLR   E +   + GKL
Sbjct: 1685 LDNLDTLEEQRDQALLRIQNYQQAAAKFYNKKVKNRLFAEGDLVLRKVFENTVEQDAGKL 1744

Query: 283  TANWEGPYKVSQVIRPGTYKLETLDGNPIQNTWHGLRLRKFY 158
             A+WEGPY +S+V++PG Y+L T+DG PI  +W+   L+++Y
Sbjct: 1745 GAHWEGPYLISKVVKPGVYELLTMDGTPIPRSWNSANLKRYY 1786


>emb|CAN78757.1| hypothetical protein VITISV_035650 [Vitis vinifera]
          Length = 888

 Score =  208 bits (530), Expect = 1e-51
 Identities = 101/223 (45%), Positives = 141/223 (63%), Gaps = 1/223 (0%)
 Frame = -2

Query: 820  RSLISDNGTQFVSKDFESFLEKYHITHKKSSVAHPQSNGQVEVTNRSLLETLKKRLEDAK 641
            +++I+DNG QF S  F +F  + +I +  S+  +PQSNGQVE TN++L+  LKKRLE AK
Sbjct: 666  QTIIADNGPQFDSIAFRNFCSELNIRNSYSTPRYPQSNGQVEATNKTLITALKKRLEQAK 725

Query: 640  GKWAEELPHALWSYRTTPRTSTGETPFKLCYGTEALIPVEVGSPSFRTVNFNEKENNEGI 461
            GKW EELP  LW+YRTTP   TG TPF L YG  A+IP E+G P+ RT    + + N  +
Sbjct: 726  GKWVEELPGVLWAYRTTPGRPTGNTPFALAYGMNAVIPTEIGLPTIRTDAAKQNDANAEL 785

Query: 460  RTNLTLTEELRNKAVEHMKSYKQKTVEYFGKKIRPRQYQEGELVLRAT-EVSDPTNQGKL 284
              NL  T+E+R  A   M +Y+Q+   ++ +K++PR ++ G LVLR   E +     GK 
Sbjct: 786  GRNLDWTDEVRESAAIRMANYQQRASAHYNRKVKPRSFKNGTLVLRKVFENTAEVGAGKF 845

Query: 283  TANWEGPYKVSQVIRPGTYKLETLDGNPIQNTWHGLRLRKFYQ 155
             ANWEGPY VS+    G Y L+ LDG P+   W+   L+++YQ
Sbjct: 846  QANWEGPYIVSKASESGAYHLQKLDGTPLLRPWNVSNLKQYYQ 888


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