BLASTX nr result

ID: Bupleurum21_contig00023050 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023050
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD19758.1| putative Ty3-gypsy-like retroelement pol polyprot...   113   1e-23
ref|XP_004161393.1| PREDICTED: uncharacterized protein LOC101232...    86   2e-15
ref|XP_004134253.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    86   2e-15
ref|XP_004140476.1| PREDICTED: uncharacterized protein LOC101221...    86   3e-15
ref|XP_004161321.1| PREDICTED: uncharacterized protein LOC101223...    77   1e-12

>gb|AAD19758.1| putative Ty3-gypsy-like retroelement pol polyprotein [Arabidopsis
           thaliana]
          Length = 587

 Score =  113 bits (283), Expect = 1e-23
 Identities = 61/108 (56%), Positives = 70/108 (64%)
 Frame = -2

Query: 329 CYRCGGQGHRSNVCPSRGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKVNIVLQRVLL 150
           C+RC GQ HRS+VCPSR T                               +N+VLQR+LL
Sbjct: 156 CFRCQGQDHRSSVCPSRRTVAFLEEEEELEEEDEYAEVEFAEEESNEM--INLVLQRILL 213

Query: 149 SSKVENQRRNLFKTYCSINDKVCNLIVDNGSAENLVSQKLVDHLKLPT 6
           SSK E QRRNLF+T CSINDKVCNLIVD GS+ENLVSQKLV++LKLPT
Sbjct: 214 SSKEEGQRRNLFRTRCSINDKVCNLIVDIGSSENLVSQKLVEYLKLPT 261


>ref|XP_004161393.1| PREDICTED: uncharacterized protein LOC101232776 [Cucumis sativus]
          Length = 282

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 49/121 (40%), Positives = 66/121 (54%), Gaps = 2/121 (1%)
 Frame = -2

Query: 359 NPYARPSGDKCYRCGGQGHRSNVCPSRGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEK 180
           N Y+RPS  KC+RCG  GH SN CP R T                             E+
Sbjct: 151 NNYSRPSLGKCFRCGQTGHLSNNCPQRRTIATAEGGGQTSEDSIEAEEETELIEADDGER 210

Query: 179 VNIVLQRVLLSSKVEN--QRRNLFKTYCSINDKVCNLIVDNGSAENLVSQKLVDHLKLPT 6
           V+ V+QR+L++ K E   QR  LFKT C+IN +VC++I+D+ S+EN V++KLV  L L  
Sbjct: 211 VSCVIQRLLITPKEEKNLQRHCLFKTRCTINGRVCDVIIDSSSSENFVAKKLVTVLNLKA 270

Query: 5   E 3
           E
Sbjct: 271 E 271


>ref|XP_004134253.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101214124 [Cucumis sativus]
          Length = 586

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 49/126 (38%), Positives = 69/126 (54%), Gaps = 2/126 (1%)
 Frame = -2

Query: 374 VQKSNNPYARPSGDKCYRCGGQGHRSNVCPSRGTXXXXXXXXXXXXXXXXXXXXXXXXXX 195
           ++K +N Y RP+  KC+RCG QGH SN CP R T                          
Sbjct: 319 MKKVDNIYNRPTLGKCFRCGQQGHLSNECPQRRTLTIEEGQEDNDSDDIFEISTPDEGD- 377

Query: 194 XXXEKVNIVLQRVLLSSKVEN--QRRNLFKTYCSINDKVCNLIVDNGSAENLVSQKLVDH 21
               +++ V+QR+L +       QR +LF+T C+IN KVC +I+D+GS+ENLVS+KLV  
Sbjct: 378 ----QLSCVIQRILFTPTAGQIPQRNSLFRTRCTINGKVCQVIIDSGSSENLVSKKLVSA 433

Query: 20  LKLPTE 3
           L L T+
Sbjct: 434 LNLKTD 439


>ref|XP_004140476.1| PREDICTED: uncharacterized protein LOC101221994 [Cucumis sativus]
          Length = 1544

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 49/121 (40%), Positives = 66/121 (54%), Gaps = 2/121 (1%)
 Frame = -2

Query: 359 NPYARPSGDKCYRCGGQGHRSNVCPSRGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEK 180
           N Y+R S  KC+RCG  GH SN CP R T                             E+
Sbjct: 466 NSYSRSSLGKCFRCGQTGHLSNNCPQRKTIAIAEEGGQTSEDSIEAEEETELIEADDGER 525

Query: 179 VNIVLQRVLLSSKVEN--QRRNLFKTYCSINDKVCNLIVDNGSAENLVSQKLVDHLKLPT 6
           V+ V+QR+L++ K E   QR  LFKT C+IN +VC++I+D+GS+EN V++KLV  L L  
Sbjct: 526 VSCVIQRLLITPKEEKNLQRHCLFKTRCTINGRVCDVIIDSGSSENFVAKKLVTVLNLKA 585

Query: 5   E 3
           E
Sbjct: 586 E 586


>ref|XP_004161321.1| PREDICTED: uncharacterized protein LOC101223713 [Cucumis sativus]
          Length = 645

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 47/123 (38%), Positives = 63/123 (51%), Gaps = 2/123 (1%)
 Frame = -2

Query: 365 SNNPYARPSGDKCYRCGGQGHRSNVCPSRGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 186
           S N Y+RP   K +RCG   H SN CP R T                             
Sbjct: 207 SQNNYSRPLLGKFFRCGQTEHLSNNCPQRKTIAIAEEGRQMSEDSKGAEDEIELIEADDG 266

Query: 185 EKVNIVLQRVLLSSKVEN--QRRNLFKTYCSINDKVCNLIVDNGSAENLVSQKLVDHLKL 12
           E+V+ V+QRVL++ K E   QR  LFK  C+IN +VC++I+DN S++N V++KLV  L L
Sbjct: 267 ERVSCVIQRVLITPKEEKKQQRHCLFKARCTINGRVCDVIIDNDSSKNFVAKKLVTVLNL 326

Query: 11  PTE 3
             E
Sbjct: 327 KAE 329


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