BLASTX nr result

ID: Bupleurum21_contig00023048 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023048
         (773 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17432.3| unnamed protein product [Vitis vinifera]              282   6e-74
emb|CAN73506.1| hypothetical protein VITISV_007907 [Vitis vinifera]   277   2e-72
ref|NP_975003.1| Ribosomal RNA adenine dimethylase family protei...   267   2e-69
ref|XP_004158885.1| PREDICTED: probable dimethyladenosine transf...   267   2e-69
ref|XP_002866759.1| ribosomal RNA adenine dimethylase family pro...   266   3e-69

>emb|CBI17432.3| unnamed protein product [Vitis vinifera]
          Length = 383

 Score =  282 bits (721), Expect = 6e-74
 Identities = 157/256 (61%), Positives = 186/256 (72%)
 Frame = +2

Query: 5   FIIRRHFLQFCEKYSCGYKYKNEDDDRKTKIIDNEDGYIQLYKSRGQHLLTNQRVLDSIV 184
           F++RRH L        G +Y   +DD + K  DN + ++ LYKS GQH+LTN RVLD+IV
Sbjct: 14  FLLRRHLLHT----KPGRRYVPRNDDVQKK--DNGEKHMFLYKSWGQHILTNPRVLDTIV 67

Query: 185 QKSDIKPTDTVLEIGPGTGNLTLKLLQVAKHVIAIEIDKRMIEILNKRVGECGLEHKITV 364
           +KS+IKPTDTVLEIGPGTGNLTL+LLQ A+ V+A+E+D RM+EIL KRV E GLE ++TV
Sbjct: 68  RKSNIKPTDTVLEIGPGTGNLTLRLLQAAQRVVAVELDARMVEILRKRVAEHGLEDQLTV 127

Query: 365 RLCCPQRV**NVQXXXXXXXXXXXXXXXXCEQVINKDALKTDLSGFDLVVANIPYNISSP 544
                                            I KDALKTD   FDLVVANIPY ISSP
Sbjct: 128 ---------------------------------ICKDALKTDFPQFDLVVANIPYGISSP 154

Query: 545 LLAKLLFGASTFRSATLLLQKEFARRLVANPGDSDYNRLAVNVKLVADVKFVMDVSKRDF 724
           L+AKL+FGA+ FRSATLLLQKEFARRL+ANPGDS++NRLAVNVKLVA+V+FVMDVSKRDF
Sbjct: 155 LVAKLVFGANPFRSATLLLQKEFARRLLANPGDSEFNRLAVNVKLVAEVEFVMDVSKRDF 214

Query: 725 VPCPKVDSSVVKIYPK 772
           +PCPKVDSSVV I PK
Sbjct: 215 LPCPKVDSSVVTIRPK 230


>emb|CAN73506.1| hypothetical protein VITISV_007907 [Vitis vinifera]
          Length = 383

 Score =  277 bits (709), Expect = 2e-72
 Identities = 156/256 (60%), Positives = 183/256 (71%)
 Frame = +2

Query: 5   FIIRRHFLQFCEKYSCGYKYKNEDDDRKTKIIDNEDGYIQLYKSRGQHLLTNQRVLDSIV 184
           F +RRH L        G +Y   +DD + K  DN +  + LYKS GQH+LTN RVLD+IV
Sbjct: 14  FXLRRHLLHT----KPGRRYVPRNDDVQKK--DNGEKXMFLYKSWGQHILTNPRVLDTIV 67

Query: 185 QKSDIKPTDTVLEIGPGTGNLTLKLLQVAKHVIAIEIDKRMIEILNKRVGECGLEHKITV 364
           +KS+IKPTDTVLEIGPGTGNLTL+LLQ A+ V+A+ +D RM+EIL KRV E GLE ++TV
Sbjct: 68  RKSNIKPTDTVLEIGPGTGNLTLRLLQAAQRVVAVXLDARMVEILRKRVAEHGLEDQLTV 127

Query: 365 RLCCPQRV**NVQXXXXXXXXXXXXXXXXCEQVINKDALKTDLSGFDLVVANIPYNISSP 544
                                            I KDALKTD   FDLVVANIPY ISSP
Sbjct: 128 ---------------------------------ICKDALKTDFPQFDLVVANIPYGISSP 154

Query: 545 LLAKLLFGASTFRSATLLLQKEFARRLVANPGDSDYNRLAVNVKLVADVKFVMDVSKRDF 724
           L+AKL+FGA+ FRSATLLLQKEFARRL+ANPGDS++NRLAVNVKLVA+V+FVMDVSKRDF
Sbjct: 155 LVAKLVFGANPFRSATLLLQKEFARRLLANPGDSEFNRLAVNVKLVAEVEFVMDVSKRDF 214

Query: 725 VPCPKVDSSVVKIYPK 772
           +PCPKVDSSVV I PK
Sbjct: 215 LPCPKVDSSVVTIRPK 230


>ref|NP_975003.1| Ribosomal RNA adenine dimethylase family protein [Arabidopsis
           thaliana] gi|10177517|dbj|BAB10912.1| dimethyladenosine
           transferase-like protein [Arabidopsis thaliana]
           gi|332010821|gb|AED98204.1| Ribosomal RNA adenine
           dimethylase family protein [Arabidopsis thaliana]
          Length = 380

 Score =  267 bits (683), Expect = 2e-69
 Identities = 140/216 (64%), Positives = 166/216 (76%)
 Frame = +2

Query: 125 LYKSRGQHLLTNQRVLDSIVQKSDIKPTDTVLEIGPGTGNLTLKLLQVAKHVIAIEIDKR 304
           L KS+GQHLLTN R+LDSIV+ SDI+PTDTVLEIGPGTGNLT+KLL+ A++V+A+E+DKR
Sbjct: 63  LCKSKGQHLLTNTRILDSIVRSSDIRPTDTVLEIGPGTGNLTMKLLEAAQNVVAVELDKR 122

Query: 305 MIEILNKRVGECGLEHKITVRLCCPQRV**NVQXXXXXXXXXXXXXXXXCEQVINKDALK 484
           M+EIL KRV + G   K+T+                                 I KD LK
Sbjct: 123 MVEILRKRVSDHGFADKLTI---------------------------------IQKDVLK 149

Query: 485 TDLSGFDLVVANIPYNISSPLLAKLLFGASTFRSATLLLQKEFARRLVANPGDSDYNRLA 664
           TD   FDLVVANIPYNISSPL+AKL++G++TFRSATLLLQKEF+RRL+ANPGDSD+NRLA
Sbjct: 150 TDFPHFDLVVANIPYNISSPLVAKLVYGSNTFRSATLLLQKEFSRRLLANPGDSDFNRLA 209

Query: 665 VNVKLVADVKFVMDVSKRDFVPCPKVDSSVVKIYPK 772
           VNVKLVADVKFVMDVSKR+FVP PKVDSSV++I PK
Sbjct: 210 VNVKLVADVKFVMDVSKREFVPPPKVDSSVIRITPK 245


>ref|XP_004158885.1| PREDICTED: probable dimethyladenosine transferase-like [Cucumis
           sativus]
          Length = 352

 Score =  267 bits (682), Expect = 2e-69
 Identities = 146/251 (58%), Positives = 179/251 (71%)
 Frame = +2

Query: 20  HFLQFCEKYSCGYKYKNEDDDRKTKIIDNEDGYIQLYKSRGQHLLTNQRVLDSIVQKSDI 199
           H ++    Y   ++    + + + K  +NE+ ++  YKSRGQH+LTNQR+LDSIV+KS I
Sbjct: 22  HLMRSASTYQHNHRNHGANGNLRKKD-ENEEAHLYFYKSRGQHILTNQRILDSIVRKSAI 80

Query: 200 KPTDTVLEIGPGTGNLTLKLLQVAKHVIAIEIDKRMIEILNKRVGECGLEHKITVRLCCP 379
            PTDTVLEIGPGTGNLTLKLL+ ++ VIA+EIDKRM+E+L+KRV E    H++  R+C  
Sbjct: 81  LPTDTVLEIGPGTGNLTLKLLEASQKVIAVEIDKRMVEVLHKRVAE----HQLEDRIC-- 134

Query: 380 QRV**NVQXXXXXXXXXXXXXXXXCEQVINKDALKTDLSGFDLVVANIPYNISSPLLAKL 559
                                      VI +DALK +   FDLVVANIPY ISSPL+AKL
Sbjct: 135 ---------------------------VICQDALKCEFPHFDLVVANIPYGISSPLVAKL 167

Query: 560 LFGASTFRSATLLLQKEFARRLVANPGDSDYNRLAVNVKLVADVKFVMDVSKRDFVPCPK 739
           ++G   FRSATLLLQKEFARRL+A+PGDS+YNRLAVNVKLVADV+ VMDVSKRDFVPCPK
Sbjct: 168 VYGTIPFRSATLLLQKEFARRLLADPGDSEYNRLAVNVKLVADVEHVMDVSKRDFVPCPK 227

Query: 740 VDSSVVKIYPK 772
           VDSSVV I PK
Sbjct: 228 VDSSVVLIRPK 238


>ref|XP_002866759.1| ribosomal RNA adenine dimethylase family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297312594|gb|EFH43018.1|
           ribosomal RNA adenine dimethylase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 376

 Score =  266 bits (681), Expect = 3e-69
 Identities = 140/216 (64%), Positives = 165/216 (76%)
 Frame = +2

Query: 125 LYKSRGQHLLTNQRVLDSIVQKSDIKPTDTVLEIGPGTGNLTLKLLQVAKHVIAIEIDKR 304
           L KS+GQHLLTN R+LD+IV+ SD++PTDTVLEIGPGTGNLT+KLL+ A+ V+A+E+DKR
Sbjct: 56  LCKSKGQHLLTNTRILDAIVRCSDVRPTDTVLEIGPGTGNLTMKLLEAAQDVVAVELDKR 115

Query: 305 MIEILNKRVGECGLEHKITVRLCCPQRV**NVQXXXXXXXXXXXXXXXXCEQVINKDALK 484
           M+EIL KRV + G  HK+T+                                 I KD LK
Sbjct: 116 MVEILRKRVSDHGFAHKLTI---------------------------------IQKDVLK 142

Query: 485 TDLSGFDLVVANIPYNISSPLLAKLLFGASTFRSATLLLQKEFARRLVANPGDSDYNRLA 664
           TD   FDLVVANIPYNISSPL+AKL++G++TFRSATLLLQKEF+RRL+ANPGDSD+NRLA
Sbjct: 143 TDFPQFDLVVANIPYNISSPLVAKLVYGSNTFRSATLLLQKEFSRRLLANPGDSDFNRLA 202

Query: 665 VNVKLVADVKFVMDVSKRDFVPCPKVDSSVVKIYPK 772
           VNVKLVADVKFVMDVSKR+FVP PKVDSSVV I PK
Sbjct: 203 VNVKLVADVKFVMDVSKREFVPPPKVDSSVVMITPK 238


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