BLASTX nr result

ID: Bupleurum21_contig00022999 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022999
         (1413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308158.1| predicted protein [Populus trichocarpa] gi|2...   392   e-119
emb|CAD98760.1| MYB transcription factor R3 type [Populus tremul...   387   e-117
ref|XP_002270472.1| PREDICTED: uncharacterized protein LOC100256...   410   e-112
ref|XP_002532327.1| myb3r3, putative [Ricinus communis] gi|22352...   408   e-111
emb|CBI30554.3| unnamed protein product [Vitis vinifera]              405   e-110

>ref|XP_002308158.1| predicted protein [Populus trichocarpa] gi|222854134|gb|EEE91681.1|
            predicted protein [Populus trichocarpa]
          Length = 530

 Score =  392 bits (1008), Expect(2) = e-119
 Identities = 197/313 (62%), Positives = 231/313 (73%), Gaps = 4/313 (1%)
 Frame = -3

Query: 1276 MDEAKLEDYCMEXXXXXXXXXXXXXXXXXXSN-MKSPGACSPTPESSAAHRRTSGPIRRA 1100
            MDE K+E+ C+E                  S  +KSPG  SP   S   +RRT+GPIRRA
Sbjct: 1    MDELKIEERCLENKQLTPASSSSQSEEGSGSAILKSPGVYSPATVSPT-NRRTTGPIRRA 59

Query: 1099 KGGWTPEEDDTLKRAVAVFKAKCWKKIAEFFPDRSEVQCLHRWQKVLNPELIKGPWTQEE 920
            KGGWTPEED+TL+ AVA +K K WKKIAEFFPDRSEVQCLHRWQKVL+PEL+KGPWTQEE
Sbjct: 60   KGGWTPEEDETLRTAVATYKGKSWKKIAEFFPDRSEVQCLHRWQKVLDPELVKGPWTQEE 119

Query: 919  DDKIIKLVAKYGPTKWSLIAKSLPGRIGKQCRERWHNHLNPYIKKDAWTLEEELALMNAH 740
            DDKI++LVAKYGPTKWS+IAK+LPGRIGKQCRERWHNHLNP IKKDAWTLEEELALMNAH
Sbjct: 120  DDKIVELVAKYGPTKWSVIAKALPGRIGKQCRERWHNHLNPDIKKDAWTLEEELALMNAH 179

Query: 739  RIHGNKWAEIAKVLPGRTDNAIKNHWNSSLKKKLEFYLATGNLPPAAKTGLQTSKKDLCL 560
            RI+GNKWAEIAKVLPGRTDN+IKNHWNSSLKKKL+FYL+TG LPP +K G Q   KD   
Sbjct: 180  RIYGNKWAEIAKVLPGRTDNSIKNHWNSSLKKKLDFYLSTGKLPPISKNGFQNGTKDTNK 239

Query: 559  TASAGNM-GSESTVQTSSGTTEVCNIED--VNHLESSTPSHEVGVSSVFQHAEPSETDFT 389
            +A    M  S+S  QTSSGTT++C +++   + LES+        SSV  +      D +
Sbjct: 240  SAVMKTMKESDSAAQTSSGTTDICKLDEDGKDQLESTLVLDVAASSSVLPNEYADSVDLS 299

Query: 388  KCQKQSPNVDDNH 350
             C  +S    ++H
Sbjct: 300  CCDSESQQKFEDH 312



 Score = 65.1 bits (157), Expect(2) = e-119
 Identities = 39/84 (46%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
 Frame = -1

Query: 279 KYESPTYGSXXXXXXXXXXXXPSAPGDMMEMQLEPD--PVVSPINTFTPPSVKSSNVYRM 106
           +++  TYGS             S P +M  +Q E +  PV SPI  FTPP VKS ++   
Sbjct: 322 QFDRSTYGSLYYEPPLVEQLD-SYPSNMGSVQHENNSCPVSSPIIFFTPPCVKSRDLSAQ 380

Query: 105 TPEAILKMAAKSFPNTPSILRKRK 34
           +PE+IL++AA SFPNTPSI RKRK
Sbjct: 381 SPESILRIAAMSFPNTPSIFRKRK 404


>emb|CAD98760.1| MYB transcription factor R3 type [Populus tremula x Populus
            tremuloides]
          Length = 530

 Score =  387 bits (993), Expect(2) = e-117
 Identities = 194/313 (61%), Positives = 228/313 (72%), Gaps = 4/313 (1%)
 Frame = -3

Query: 1276 MDEAKLEDYCMEXXXXXXXXXXXXXXXXXXSN-MKSPGACSPTPESSAAHRRTSGPIRRA 1100
            MDE K+E+ C+E                  S  +KSPG  SP   S   +RRT+GPIRRA
Sbjct: 1    MDELKIEERCLENKQLTPASSSSQSEEGSGSAILKSPGVYSPATVSPT-NRRTTGPIRRA 59

Query: 1099 KGGWTPEEDDTLKRAVAVFKAKCWKKIAEFFPDRSEVQCLHRWQKVLNPELIKGPWTQEE 920
            KGGWTPEED+TL+ AVA ++ K WKKIAEFFPDRSEVQCLHRWQKVL+PEL+KGPWTQEE
Sbjct: 60   KGGWTPEEDETLRTAVATYRGKSWKKIAEFFPDRSEVQCLHRWQKVLDPELVKGPWTQEE 119

Query: 919  DDKIIKLVAKYGPTKWSLIAKSLPGRIGKQCRERWHNHLNPYIKKDAWTLEEELALMNAH 740
            DDKI++LVAKYGPTKWS+IAK+LPGRIGKQCRERWHNHLNP IKKDAWTLEEELALMNAH
Sbjct: 120  DDKIVELVAKYGPTKWSVIAKALPGRIGKQCRERWHNHLNPDIKKDAWTLEEELALMNAH 179

Query: 739  RIHGNKWAEIAKVLPGRTDNAIKNHWNSSLKKKLEFYLATGNLPPAAKTGLQTSKKDLCL 560
            RI+GNKWAEIAKVLPGRTDN+IKNHWNSSLKKKL+FYL+TG LPP +K G Q   KD   
Sbjct: 180  RIYGNKWAEIAKVLPGRTDNSIKNHWNSSLKKKLDFYLSTGKLPPISKNGFQNGTKDTNK 239

Query: 559  TASAGNM-GSESTVQTSSGTTEVCNIED--VNHLESSTPSHEVGVSSVFQHAEPSETDFT 389
            +A    M  S+S  QTSSGTT++C +++   + LES+        SS   +      D  
Sbjct: 240  SAVMKTMKESDSAAQTSSGTTDICKLDEDGKDQLESTLVLDVAASSSALPNEYADSVDLR 299

Query: 388  KCQKQSPNVDDNH 350
             C  +     ++H
Sbjct: 300  CCDSELQQKFEDH 312



 Score = 62.8 bits (151), Expect(2) = e-117
 Identities = 38/84 (45%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
 Frame = -1

Query: 279 KYESPTYGSXXXXXXXXXXXXPSAPGDMMEMQLEPD--PVVSPINTFTPPSVKSSNVYRM 106
           +++  TYGS             S P +   +Q E +  PV SPI  FTPP VKS ++   
Sbjct: 322 QFDRSTYGSLYYEPPLVEQLD-SYPSNTGSVQHENNSCPVSSPIIFFTPPCVKSRDLSAQ 380

Query: 105 TPEAILKMAAKSFPNTPSILRKRK 34
           +PE+IL++AA SFPNTPSI RKRK
Sbjct: 381 SPESILRIAAMSFPNTPSIFRKRK 404


>ref|XP_002270472.1| PREDICTED: uncharacterized protein LOC100256181 [Vitis vinifera]
          Length = 558

 Score =  410 bits (1053), Expect = e-112
 Identities = 204/316 (64%), Positives = 235/316 (74%), Gaps = 10/316 (3%)
 Frame = -3

Query: 1276 MDEAKLEDY--CMEXXXXXXXXXXXXXXXXXXSNMKSPGACSPTPESSAAHRRTSGPIRR 1103
            M + KLE+   C+E                    +KSPG CSP   +S +HRRT+GPIRR
Sbjct: 1    MADVKLEEEECCVENKQLVTASSSSLSEGSGSVTVKSPGICSPAT-TSPSHRRTTGPIRR 59

Query: 1102 AKGGWTPEEDDTLKRAVAVFKAKCWKKIAEFFPDRSEVQCLHRWQKVLNPELIKGPWTQE 923
            AKGGWTP+EDDTL+ AVA FK K WKKIAEFFPDRSEVQCLHRWQKVLNPEL+KGPWTQE
Sbjct: 60   AKGGWTPQEDDTLRTAVAYFKGKSWKKIAEFFPDRSEVQCLHRWQKVLNPELVKGPWTQE 119

Query: 922  EDDKIIKLVAKYGPTKWSLIAKSLPGRIGKQCRERWHNHLNPYIKKDAWTLEEELALMNA 743
            EDDKI +LV+KYGPTKWS+IAKSLPGRIGKQCRERWHNHLNP IKKDAWTL+EELALMNA
Sbjct: 120  EDDKITELVSKYGPTKWSVIAKSLPGRIGKQCRERWHNHLNPDIKKDAWTLDEELALMNA 179

Query: 742  HRIHGNKWAEIAKVLPGRTDNAIKNHWNSSLKKKLEFYLATGNLPPAAKTGLQTSKKDLC 563
            H  HGNKWAEIAKVLPGRTDN+IKNHWNSSLKKKL+FYLATG LPP  K+G Q   KD  
Sbjct: 180  HSKHGNKWAEIAKVLPGRTDNSIKNHWNSSLKKKLDFYLATGKLPPVVKSGFQNGAKDTN 239

Query: 562  LTASAG------NMGSESTVQTSSGTTEVCNIED--VNHLESSTPSHEVGVSSVFQHAEP 407
             T + G      N GSEST QTSSGTT++C +E+   + LESS P  + GVS      E 
Sbjct: 240  RTNAPGKLLGCSNKGSESTAQTSSGTTDLCKLEEDSKDQLESSAPLQDAGVSLSVPPNES 299

Query: 406  SETDFTKCQKQSPNVD 359
            ++++  +C+     +D
Sbjct: 300  ADSEDAQCKPYLSKID 315



 Score = 67.0 bits (162), Expect = 1e-08
 Identities = 30/56 (53%), Positives = 43/56 (76%)
 Frame = -1

Query: 195 MEMQLEPDPVVSPINTFTPPSVKSSNVYRMTPEAILKMAAKSFPNTPSILRKRKMD 28
           M+ + +  P +SPI+ FTPP VK S++   +P++ILK AA++FPNTPSILRKRK +
Sbjct: 379 MQYECDTSPFMSPISFFTPPCVKGSSLSMQSPQSILKNAARTFPNTPSILRKRKTE 434


>ref|XP_002532327.1| myb3r3, putative [Ricinus communis] gi|223527970|gb|EEF30054.1|
            myb3r3, putative [Ricinus communis]
          Length = 584

 Score =  408 bits (1048), Expect = e-111
 Identities = 206/332 (62%), Positives = 238/332 (71%), Gaps = 19/332 (5%)
 Frame = -3

Query: 1297 LDEGRSNMDEAKLEDYCMEXXXXXXXXXXXXXXXXXXSNMKSPGACSPTPESSAAHRRTS 1118
            L E    MDEAK+E+ C+E                  + +KSPG  SP   +S  HRRT+
Sbjct: 11   LQEEEEEMDEAKIEECCLENKQLTAASSSSLSEGSGSATLKSPGVSSPAT-ASPTHRRTT 69

Query: 1117 GPIRRAKGGWTPEEDDTLKRAVAVFKAKCWKKIAEFFPDRSEVQCLHRWQKVLNPELIKG 938
            GPIRRAKGGWT EED+TL+ AVA FK K WKKIAEFFPDRSEVQCLHRWQKVLNP+L+KG
Sbjct: 70   GPIRRAKGGWTLEEDETLRNAVAAFKGKSWKKIAEFFPDRSEVQCLHRWQKVLNPDLVKG 129

Query: 937  PWTQEEDDKIIKLVAKYGPTKWSLIAKSLPGRIGKQCRERWHNHLNPYIKKDAWTLEEEL 758
            PWTQEEDDKI +LVAKYGPTKWS+IAKSLPGRIGKQCRERWHNHLNP IKKDAWTLEEE+
Sbjct: 130  PWTQEEDDKITELVAKYGPTKWSVIAKSLPGRIGKQCRERWHNHLNPDIKKDAWTLEEEM 189

Query: 757  ALMNAHRIHGNKWAEIAKVLPGRTDNAIKNHWNSSLKKKLEFYLATGNLPPAAKTGLQTS 578
            ALMNAHRIHGNKWAEIAKVLPGRTDN+IKNHWNSSLKKKL+FYLATG LPP AK+ +  S
Sbjct: 190  ALMNAHRIHGNKWAEIAKVLPGRTDNSIKNHWNSSLKKKLDFYLATGKLPPVAKSDIVFS 249

Query: 577  KKDLCLTASAGNMG-----------------SESTVQTSSGTTEVCNIED--VNHLESST 455
             + L   A  G+                   S+ST QTSSGTT+VC +E+   N LESS 
Sbjct: 250  SRKLPSVAKNGSQDGIKDINNKHSVFKMYKESDSTAQTSSGTTDVCKLEEDSKNQLESSL 309

Query: 454  PSHEVGVSSVFQHAEPSETDFTKCQKQSPNVD 359
               ++  SS F   E ++++  +C+  S   D
Sbjct: 310  LVRDLATSSSFLPNESADSEGVECKPNSFTAD 341



 Score = 67.4 bits (163), Expect = 9e-09
 Identities = 30/47 (63%), Positives = 40/47 (85%)
 Frame = -1

Query: 171 PVVSPINTFTPPSVKSSNVYRMTPEAILKMAAKSFPNTPSILRKRKM 31
           P+ SPI+ FTPP VK+S++   +PE+IL++AAKSFPNTPSI RKRK+
Sbjct: 413 PIASPISFFTPPCVKNSDLSSQSPESILRIAAKSFPNTPSIFRKRKV 459


>emb|CBI30554.3| unnamed protein product [Vitis vinifera]
          Length = 329

 Score =  405 bits (1041), Expect = e-110
 Identities = 201/292 (68%), Positives = 225/292 (77%), Gaps = 10/292 (3%)
 Frame = -3

Query: 1276 MDEAKLEDY--CMEXXXXXXXXXXXXXXXXXXSNMKSPGACSPTPESSAAHRRTSGPIRR 1103
            M + KLE+   C+E                    +KSPG CSP   +S +HRRT+GPIRR
Sbjct: 1    MADVKLEEEECCVENKQLVTASSSSLSEGSGSVTVKSPGICSPAT-TSPSHRRTTGPIRR 59

Query: 1102 AKGGWTPEEDDTLKRAVAVFKAKCWKKIAEFFPDRSEVQCLHRWQKVLNPELIKGPWTQE 923
            AKGGWTP+EDDTL+ AVA FK K WKKIAEFFPDRSEVQCLHRWQKVLNPEL+KGPWTQE
Sbjct: 60   AKGGWTPQEDDTLRTAVAYFKGKSWKKIAEFFPDRSEVQCLHRWQKVLNPELVKGPWTQE 119

Query: 922  EDDKIIKLVAKYGPTKWSLIAKSLPGRIGKQCRERWHNHLNPYIKKDAWTLEEELALMNA 743
            EDDKI +LV+KYGPTKWS+IAKSLPGRIGKQCRERWHNHLNP IKKDAWTL+EELALMNA
Sbjct: 120  EDDKITELVSKYGPTKWSVIAKSLPGRIGKQCRERWHNHLNPDIKKDAWTLDEELALMNA 179

Query: 742  HRIHGNKWAEIAKVLPGRTDNAIKNHWNSSLKKKLEFYLATGNLPPAAKTGLQTSKKDLC 563
            H  HGNKWAEIAKVLPGRTDN+IKNHWNSSLKKKL+FYLATG LPP  K+G Q   KD  
Sbjct: 180  HSKHGNKWAEIAKVLPGRTDNSIKNHWNSSLKKKLDFYLATGKLPPVVKSGFQNGAKDTN 239

Query: 562  LTASAG------NMGSESTVQTSSGTTEVCNIED--VNHLESSTPSHEVGVS 431
             T + G      N GSEST QTSSGTT++C +E+   + LESS P  + GVS
Sbjct: 240  RTNAPGKLLGCSNKGSESTAQTSSGTTDLCKLEEDSKDQLESSAPLQDAGVS 291


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