BLASTX nr result

ID: Bupleurum21_contig00022998 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022998
         (797 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284210.1| PREDICTED: PRA1 family protein D-like [Vitis...   177   2e-42
emb|CAN60779.1| hypothetical protein VITISV_032147 [Vitis vinifera]   177   2e-42
ref|XP_002307629.1| predicted protein [Populus trichocarpa] gi|2...   143   4e-32
ref|XP_002300800.1| predicted protein [Populus trichocarpa] gi|2...   139   7e-31
ref|XP_002275619.1| PREDICTED: PRA1 family protein F2 isoform 1 ...   137   2e-30

>ref|XP_002284210.1| PREDICTED: PRA1 family protein D-like [Vitis vinifera]
          Length = 191

 Score =  177 bits (449), Expect = 2e-42
 Identities = 85/156 (54%), Positives = 110/156 (70%)
 Frame = +2

Query: 104 RPWREFLDISAVSLPISFSETTFRIKKNLYYFRSNYAXXXXXXXXXXXXXHPISIIVFLF 283
           RPW E LD+SA+SLP S  E T RIK++L YFR NY              HPIS+IVFL 
Sbjct: 36  RPWGELLDLSALSLPFSLGEATARIKRSLAYFRVNYTLIVLLVLFVSLLWHPISMIVFLV 95

Query: 284 TFAAWLYLYLFRTEPIILFNWIVDDWAVLIFLYVITFGALILTKVWMNVFVSILIGGFVV 463
            F AWL+LY  R +P+++FN IVDD  VL+ +  +T  AL+LT VW+NVFVS++IG F+V
Sbjct: 96  VFVAWLFLYFLRDDPVLIFNRIVDDRVVLVGVAAVTIVALVLTHVWLNVFVSLVIGSFLV 155

Query: 464 GVHAALRAPEDVDDMESPYGPLLSVVDSPRGAYNRV 571
            +H A RA +++DD ESPYG LL+VVDSPRG+Y+ V
Sbjct: 156 CLHGAFRASDNLDDQESPYGALLTVVDSPRGSYSLV 191


>emb|CAN60779.1| hypothetical protein VITISV_032147 [Vitis vinifera]
          Length = 160

 Score =  177 bits (449), Expect = 2e-42
 Identities = 85/156 (54%), Positives = 110/156 (70%)
 Frame = +2

Query: 104 RPWREFLDISAVSLPISFSETTFRIKKNLYYFRSNYAXXXXXXXXXXXXXHPISIIVFLF 283
           RPW E LD+SA+SLP S  E T RIK++L YFR NY              HPIS+IVFL 
Sbjct: 5   RPWGELLDLSALSLPFSLGEATARIKRSLAYFRVNYTLIVLLVLFVSLLWHPISMIVFLV 64

Query: 284 TFAAWLYLYLFRTEPIILFNWIVDDWAVLIFLYVITFGALILTKVWMNVFVSILIGGFVV 463
            F AWL+LY  R +P+++FN IVDD  VL+ +  +T  AL+LT VW+NVFVS++IG F+V
Sbjct: 65  VFVAWLFLYFLRDDPVLIFNRIVDDRVVLVGVAAVTIVALVLTHVWLNVFVSLVIGSFLV 124

Query: 464 GVHAALRAPEDVDDMESPYGPLLSVVDSPRGAYNRV 571
            +H A RA +++DD ESPYG LL+VVDSPRG+Y+ V
Sbjct: 125 CLHGAFRASDNLDDQESPYGALLTVVDSPRGSYSLV 160


>ref|XP_002307629.1| predicted protein [Populus trichocarpa] gi|222857078|gb|EEE94625.1|
           predicted protein [Populus trichocarpa]
          Length = 201

 Score =  143 bits (361), Expect = 4e-32
 Identities = 74/159 (46%), Positives = 99/159 (62%), Gaps = 3/159 (1%)
 Frame = +2

Query: 104 RPWREFLDISAVSLPISFSETTFRIKKNLYYFRSNYAXXXXXXXXXXXXXHPISIIVFLF 283
           RPWRE ++ S+ + P+SF E T R+K+NLYYFR NY              HP+S+IVFL 
Sbjct: 43  RPWRELIEFSSFTRPLSFGEATIRVKRNLYYFRVNYTMIILVILFLSLLWHPLSMIVFLV 102

Query: 284 TFAAWLYLYLFRTEPIILFNWIVDDWAVLIFLYVITFGALILTKVWMNVFVSILIGGFVV 463
            F AW +LY FR +P+++F+  +DD  VL  L ++T  ALI T VW+NV VS+LIG  VV
Sbjct: 103 VFVAWFFLYFFRDQPLVIFHRPIDDRVVLGLLSIVTIIALIFTHVWLNVLVSVLIGAAVV 162

Query: 464 GVHAALRAPED--VDDMESPYGPLLSVVDSP-RGAYNRV 571
            +HAA R  E+  +D+ +     L SVV SP R  Y RV
Sbjct: 163 VLHAAFRGTENLYLDEHDLADEGLFSVVGSPMRDGYTRV 201


>ref|XP_002300800.1| predicted protein [Populus trichocarpa] gi|222842526|gb|EEE80073.1|
           predicted protein [Populus trichocarpa]
          Length = 195

 Score =  139 bits (350), Expect = 7e-31
 Identities = 72/159 (45%), Positives = 95/159 (59%), Gaps = 2/159 (1%)
 Frame = +2

Query: 89  VATVNRPWREFLDISAVSLPISFSETTFRIKKNLYYFRSNYAXXXXXXXXXXXXXHPISI 268
           +    RPWRE ++ S+ + P S  +TT RIK+NL YFR NY              HP+S+
Sbjct: 32  IFATRRPWRELIEFSSFARPGSLGDTTIRIKRNLSYFRVNYTMIILSILFLSLLWHPLSM 91

Query: 269 IVFLFTFAAWLYLYLFRTEPIILFNWIVDDWAVLIFLYVITFGALILTKVWMNVFVSILI 448
           IVFL  F AW +LY FR +P+++F+  +DD  VL  L V T  ALI T VW+NV VS+LI
Sbjct: 92  IVFLIVFVAWFFLYFFRDQPLVIFHRTIDDRVVLGLLGVATIVALIFTHVWLNVLVSLLI 151

Query: 449 GGFVVGVHAALRAPEDV--DDMESPYGPLLSVVDSPRGA 559
           G  +V +HAA R  +D+  DD +   G LLS V SP  A
Sbjct: 152 GAAIVVLHAAFRRTDDMYSDDQDVADGSLLSFVGSPTRA 190


>ref|XP_002275619.1| PREDICTED: PRA1 family protein F2 isoform 1 [Vitis vinifera]
           gi|359479610|ref|XP_003632302.1| PREDICTED: PRA1 family
           protein F2 isoform 2 [Vitis vinifera]
          Length = 188

 Score =  137 bits (346), Expect = 2e-30
 Identities = 69/151 (45%), Positives = 93/151 (61%), Gaps = 2/151 (1%)
 Frame = +2

Query: 104 RPWREFLDISAVSLPISFSETTFRIKKNLYYFRSNYAXXXXXXXXXXXXXHPISIIVFLF 283
           RPWR+F D+S+ S P +  E T R+K+N+ YFR NY              HP+S+IVFL 
Sbjct: 34  RPWRQFADLSSFSRPYAAGEVTIRVKRNVSYFRVNYVMMALFILFLSLLWHPVSMIVFLI 93

Query: 284 TFAAWLYLYLFRTEPIILFNWIVDDWAVLIFLYVITFGALILTKVWMNVFVSILIGGFVV 463
            F  W +LY FR EP+++FN  + D  VLI L ++T   L+LT VW+NV VS+ I   VV
Sbjct: 94  VFLGWFFLYFFRNEPLMIFNRTIGDRTVLIVLGLVTIVVLVLTHVWLNVVVSLAIVVVVV 153

Query: 464 GVHAALRAPED--VDDMESPYGPLLSVVDSP 550
           G+HAA R  ED  +D+ ++    LLSVV SP
Sbjct: 154 GLHAAFRGTEDHFLDEQDAAEDGLLSVVGSP 184


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