BLASTX nr result

ID: Bupleurum21_contig00022988 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022988
         (1197 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533472.1| ATRAD3, putative [Ricinus communis] gi|22352...   519   e-145
ref|XP_002305225.1| predicted protein [Populus trichocarpa] gi|2...   511   e-142
ref|XP_002263360.1| PREDICTED: probable methyltransferase PMT8 [...   490   e-136
ref|XP_003616242.1| hypothetical protein MTR_5g077710 [Medicago ...   473   e-131
ref|XP_002302925.1| predicted protein [Populus trichocarpa] gi|2...   454   e-125

>ref|XP_002533472.1| ATRAD3, putative [Ricinus communis] gi|223526665|gb|EEF28904.1|
            ATRAD3, putative [Ricinus communis]
          Length = 400

 Score =  519 bits (1336), Expect = e-145
 Identities = 253/357 (70%), Positives = 291/357 (81%), Gaps = 5/357 (1%)
 Frame = +3

Query: 141  MNSPKKPNHQSVNLFHIFLLISTNLLTLFISITF-NSSNCSLNT-SKNTPTTSDNLVSEP 314
            M SP KP   S NLF +FLL+STNLLTLF+S TF +SS+CSLN  +  T T +   +S  
Sbjct: 1    MESPHKPKSISTNLFFLFLLLSTNLLTLFLSSTFYSSSSCSLNPLTAATSTAAATAISTT 60

Query: 315  SS--SFHDSETTTNLPPEFTAFTSPHKLPFGFNTNFDSDKIIPPVGRPCTLFPDILRKFM 488
            ++  +   S+T+ +LP EF AFTS   LPFGFNTNFDSD I PPVG+ CTLFP+ L ++M
Sbjct: 61   ATITTAATSQTSLDLPSEFLAFTSGQLLPFGFNTNFDSDTIYPPVGQSCTLFPNELNRYM 120

Query: 489  SYRVNGSCPDDELLAQKLLLKGCEXXXXXXXXXXXXQDYVEPYPLPDSFWSTPSDSSVVW 668
            +Y+VNGSCPDDELLAQKLLLKGCE             +Y EPYPLP S W+TP DSSVVW
Sbjct: 121  NYKVNGSCPDDELLAQKLLLKGCEPLPRRRCRPAAQPNYDEPYPLPTSLWTTPPDSSVVW 180

Query: 669  TAYTCKNYTCLINRMRNQKGFDDCKDCFDLSGTERTRWA-RTNSGGGIDFSIDEVLAVKK 845
            TAYTCK YTCLINR R QKGFDDCKDCFDL G E+ RWA + ++ G +DF+IDEVLA KK
Sbjct: 181  TAYTCKGYTCLINRFRTQKGFDDCKDCFDLEGREKARWASKQSNAGSLDFAIDEVLATKK 240

Query: 846  PGTIRIGLDIGGGVATFAIRMKERNVTIVTTSMNLNGPFNNFIAARGVVPLYLSISQRLP 1025
            PGTIRIGLDIGGGVATFA+RM++RN+TIVTTSMNLNGPFNNFIA+RGVVPLY+SISQRLP
Sbjct: 241  PGTIRIGLDIGGGVATFAVRMRDRNITIVTTSMNLNGPFNNFIASRGVVPLYISISQRLP 300

Query: 1026 FFDNTLDIVHSMHVMSNWIPTTLLHFMFFDIYRVLRPGGLFWLDHFFCVGEQLEEVY 1196
            FFDNTLDIVHSMHV+SNWIPTT LHF+ FDIYRVLRPGGLFWLDHFFCVGE+LE+VY
Sbjct: 301  FFDNTLDIVHSMHVLSNWIPTTSLHFLMFDIYRVLRPGGLFWLDHFFCVGEELEQVY 357


>ref|XP_002305225.1| predicted protein [Populus trichocarpa] gi|222848189|gb|EEE85736.1|
            predicted protein [Populus trichocarpa]
          Length = 399

 Score =  511 bits (1316), Expect = e-142
 Identities = 255/360 (70%), Positives = 284/360 (78%), Gaps = 8/360 (2%)
 Frame = +3

Query: 141  MNSPKKPNHQSVNLFHIFLLISTNLLTLFISITFNSSN-CSLNTSKNTPTTSDNLVSEPS 317
            M+SP+KP   S NLF + LL+STNLLTLF+S TF SS+ C L+   +  T    L    S
Sbjct: 1    MDSPRKPKPLSTNLFFLVLLLSTNLLTLFLSSTFYSSSFCYLHPISSIST----LTQISS 56

Query: 318  SSFHDSETTTN------LPPEFTAFTSPHKLPFGFNTNFDSDKIIPPVGRPCTLFPDILR 479
            SS  DS+ T N      LP EF AFTS   LP+GFNTNFDSD   PPVG+ CT FPD L 
Sbjct: 57   SSVADSDATENPDTQLDLPSEFLAFTSGQALPYGFNTNFDSDTFYPPVGQACTRFPDELS 116

Query: 480  KFMSYRVNGSCPDDELLAQKLLLKGCEXXXXXXXXXXXXQDYVEPYPLPDSFWSTPSDSS 659
            +FMSY+VNGSCPDDELLAQKLLLKGCE             DYV+PYPLP S W+TP +SS
Sbjct: 117  RFMSYKVNGSCPDDELLAQKLLLKGCEPLPRRRCRPATQPDYVDPYPLPTSLWTTPPNSS 176

Query: 660  VVWTAYTCKNYTCLINRMRNQKGFDDCKDCFDLSGTERTRWA-RTNSGGGIDFSIDEVLA 836
            VVWTAYTCK+YTCLINRM+ QKGFDDCKDCFDL G E+ RWA R    G +DF+IDEVLA
Sbjct: 177  VVWTAYTCKDYTCLINRMKTQKGFDDCKDCFDLQGREKNRWASREVIEGSLDFTIDEVLA 236

Query: 837  VKKPGTIRIGLDIGGGVATFAIRMKERNVTIVTTSMNLNGPFNNFIAARGVVPLYLSISQ 1016
             KKPGTIRIGLDIGGGVATFAIRMKERN+TI+TTSMNLNGPFNNFIA+RGVVPLY+SISQ
Sbjct: 237  TKKPGTIRIGLDIGGGVATFAIRMKERNITIITTSMNLNGPFNNFIASRGVVPLYISISQ 296

Query: 1017 RLPFFDNTLDIVHSMHVMSNWIPTTLLHFMFFDIYRVLRPGGLFWLDHFFCVGEQLEEVY 1196
            RLPFFDNTLDIVHSMHV+SNWIPTTLLHF+ FDIYRVLRPGGLFWLDHFFCV +Q  +VY
Sbjct: 297  RLPFFDNTLDIVHSMHVLSNWIPTTLLHFLMFDIYRVLRPGGLFWLDHFFCVEDQFLDVY 356


>ref|XP_002263360.1| PREDICTED: probable methyltransferase PMT8 [Vitis vinifera]
            gi|147861796|emb|CAN83179.1| hypothetical protein
            VITISV_013308 [Vitis vinifera]
          Length = 392

 Score =  490 bits (1262), Expect = e-136
 Identities = 241/353 (68%), Positives = 274/353 (77%), Gaps = 1/353 (0%)
 Frame = +3

Query: 141  MNSPKKPNHQSVNLFHIFLLISTNLLTLFISITFNSSNCSLNTSKNTPTTSDNLVSEPSS 320
            M+S +K    S N+F + +L STN LT   S +  SS CS+  S       D+ VS+   
Sbjct: 1    MDSSQKLKPFSTNVFFLVVLFSTNFLTFLFSSSLYSS-CSITPSTTHVAAVDDPVSD--- 56

Query: 321  SFHDSETTTNLPPEFTAFTSPHKLPFGFNTNFDSDKIIPPVGRPCTLFPDILRKFMSYRV 500
            +  +S+TTT+LP EF +FTSP  LPFGF TNFDSD II PVG PCT F + L ++MSYRV
Sbjct: 57   NVINSQTTTDLPTEFISFTSPQLLPFGFTTNFDSDSIIAPVGHPCTFFANDLSRYMSYRV 116

Query: 501  NGSCPDDELLAQKLLLKGCEXXXXXXXXXXXXQDYVEPYPLPDSFWSTPSDSSVVWTAYT 680
            NGSCPDDEL AQKLLLKGCE             +Y EPYPLP S WSTP DSSVVWTAYT
Sbjct: 117  NGSCPDDELFAQKLLLKGCEPLPRRRCRPTTPNEYQEPYPLPASLWSTPPDSSVVWTAYT 176

Query: 681  CKNYTCLINRMRNQKGFDDCKDCFDLSGTERTRWARTNSG-GGIDFSIDEVLAVKKPGTI 857
            CKNY+CLINR RNQKGFDDCKDCFDL GTER RW  + SG   +DF+IDEVL +KK GT+
Sbjct: 177  CKNYSCLINRKRNQKGFDDCKDCFDLEGTERYRWIGSKSGHNELDFTIDEVLEMKKRGTV 236

Query: 858  RIGLDIGGGVATFAIRMKERNVTIVTTSMNLNGPFNNFIAARGVVPLYLSISQRLPFFDN 1037
            RIGLDIGGG  TFA+RM ERN+TIVTTSMNLNGPFN+FIA+RGVVPLY+SISQRLPFFDN
Sbjct: 237  RIGLDIGGGAGTFAVRMLERNITIVTTSMNLNGPFNSFIASRGVVPLYISISQRLPFFDN 296

Query: 1038 TLDIVHSMHVMSNWIPTTLLHFMFFDIYRVLRPGGLFWLDHFFCVGEQLEEVY 1196
            TLDIVHSMHV+SNWIP TLLHF+ FDIYRVLRPGGLFWLDHFFC+ EQ+EEVY
Sbjct: 297  TLDIVHSMHVLSNWIPNTLLHFLLFDIYRVLRPGGLFWLDHFFCMDEQMEEVY 349


>ref|XP_003616242.1| hypothetical protein MTR_5g077710 [Medicago truncatula]
            gi|355517577|gb|AES99200.1| hypothetical protein
            MTR_5g077710 [Medicago truncatula]
          Length = 388

 Score =  473 bits (1217), Expect = e-131
 Identities = 224/351 (63%), Positives = 268/351 (76%)
 Frame = +3

Query: 144  NSPKKPNHQSVNLFHIFLLISTNLLTLFISITFNSSNCSLNTSKNTPTTSDNLVSEPSSS 323
            N    P   + NL  I LL+ TNL+TLF+S T++SS C+ N +     T+        ++
Sbjct: 4    NINPNPKTLTTNLLFISLLLFTNLITLFLSSTYHSSTCTPNFTTTATATA--------TA 55

Query: 324  FHDSETTTNLPPEFTAFTSPHKLPFGFNTNFDSDKIIPPVGRPCTLFPDILRKFMSYRVN 503
              DS     LPPEF A TSP KLP GFN NF+SD + PP G  CTLFPD +R FMSY VN
Sbjct: 56   AEDSAGDGYLPPEFFASTSPQKLPLGFNRNFNSDTVHPPAGSACTLFPDDIRSFMSYDVN 115

Query: 504  GSCPDDELLAQKLLLKGCEXXXXXXXXXXXXQDYVEPYPLPDSFWSTPSDSSVVWTAYTC 683
            GSCPDDE+L+Q+LLLKGCE             ++ +P P P S WSTPS+SSVVWTAYTC
Sbjct: 116  GSCPDDEILSQRLLLKGCEPLPRRRCRPAAPPNFPQPIPFPSSLWSTPSNSSVVWTAYTC 175

Query: 684  KNYTCLINRMRNQKGFDDCKDCFDLSGTERTRWARTNSGGGIDFSIDEVLAVKKPGTIRI 863
            K+YTCLI+R R Q+GFDDCKDCFDL+G E+ RW    S G +DFSID+VL  +KPG++RI
Sbjct: 176  KSYTCLIDRSRTQRGFDDCKDCFDLNGREKHRWTNPRSNG-LDFSIDDVLETRKPGSVRI 234

Query: 864  GLDIGGGVATFAIRMKERNVTIVTTSMNLNGPFNNFIAARGVVPLYLSISQRLPFFDNTL 1043
            GLDIGGGVATFA+RMK+RN+TI+TTS+NLNGPFN+FIA+RGV+PLY+SISQR PFFDNTL
Sbjct: 235  GLDIGGGVATFAVRMKDRNITIITTSLNLNGPFNSFIASRGVLPLYMSISQRFPFFDNTL 294

Query: 1044 DIVHSMHVMSNWIPTTLLHFMFFDIYRVLRPGGLFWLDHFFCVGEQLEEVY 1196
            DIVHSMHV+SNWIP TLLHF+ FD+YRVLRPGGLFWLDHFFCVG+QLE VY
Sbjct: 295  DIVHSMHVLSNWIPETLLHFLLFDVYRVLRPGGLFWLDHFFCVGDQLENVY 345


>ref|XP_002302925.1| predicted protein [Populus trichocarpa] gi|222844651|gb|EEE82198.1|
            predicted protein [Populus trichocarpa]
          Length = 322

 Score =  454 bits (1168), Expect = e-125
 Identities = 214/283 (75%), Positives = 236/283 (83%), Gaps = 1/283 (0%)
 Frame = +3

Query: 351  LPPEFTAFTSPHKLPFGFNTNFDSDKIIPPVGRPCTLFPDILRKFMSYRVNGSCPDDELL 530
            LP EF AF+S   LP GFNTNFDSD   PPVG+ CT FPD L +FMSY+VNGSCPDDEL 
Sbjct: 1    LPSEFLAFSSGQVLPLGFNTNFDSDTFYPPVGQACTRFPDELSRFMSYKVNGSCPDDELF 60

Query: 531  AQKLLLKGCEXXXXXXXXXXXXQDYVEPYPLPDSFWSTPSDSSVVWTAYTCKNYTCLINR 710
            AQKLLLKGCE             DYVEPYPLP S W+TP +SSVVWTAYTCK YTCLINR
Sbjct: 61   AQKLLLKGCEPLPRRRCRPAAQPDYVEPYPLPTSLWTTPPNSSVVWTAYTCKVYTCLINR 120

Query: 711  MRNQKGFDDCKDCFDLSGTERTRWA-RTNSGGGIDFSIDEVLAVKKPGTIRIGLDIGGGV 887
             + QKGFDDCKDCFDL G E+ RWA R    G +DF+IDEVLA KKPGTIRIGLDIGGGV
Sbjct: 121  GKTQKGFDDCKDCFDLHGREQNRWASRQTIEGSLDFTIDEVLATKKPGTIRIGLDIGGGV 180

Query: 888  ATFAIRMKERNVTIVTTSMNLNGPFNNFIAARGVVPLYLSISQRLPFFDNTLDIVHSMHV 1067
            ATFA+RM+ERN+TI+TTSMNLNGPFNNFIA+RGV+PLY+SISQRLPFFDNTLDIVHSMHV
Sbjct: 181  ATFAVRMRERNITIITTSMNLNGPFNNFIASRGVMPLYISISQRLPFFDNTLDIVHSMHV 240

Query: 1068 MSNWIPTTLLHFMFFDIYRVLRPGGLFWLDHFFCVGEQLEEVY 1196
            +SNWIP+TLLHF+ FDIYRVLRPGGLFWLDHFFCV +Q  +VY
Sbjct: 241  LSNWIPSTLLHFLMFDIYRVLRPGGLFWLDHFFCVEDQFLDVY 283


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