BLASTX nr result

ID: Bupleurum21_contig00022979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022979
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312349.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
ref|XP_002324384.1| predicted protein [Populus trichocarpa] gi|2...   105   4e-21
gb|AFK44365.1| unknown [Lotus japonicus]                              104   9e-21
ref|XP_002514528.1| conserved hypothetical protein [Ricinus comm...   103   1e-20
ref|XP_003518820.1| PREDICTED: uncharacterized protein LOC100783...   102   3e-20

>ref|XP_002312349.1| predicted protein [Populus trichocarpa] gi|222852169|gb|EEE89716.1|
           predicted protein [Populus trichocarpa]
          Length = 384

 Score =  106 bits (264), Expect = 2e-21
 Identities = 54/91 (59%), Positives = 64/91 (70%)
 Frame = +3

Query: 57  VVQREVVLVGGMEAVWDEKNVVDGTIWFKSFGSKGEEVSVGLSSEIVVRMKWEEERCGCV 236
           VVQREV+ V G E   DE+N+VDG +WF+S  + G E SVGLS EIV RMKWE+ER G +
Sbjct: 267 VVQREVIAVAGREVEPDERNLVDGIMWFRSSSNGGGEASVGLSLEIVERMKWEQERAGWL 326

Query: 237 GGNEREVRLNIVEEFKGGAEQWQKFGCYVLV 329
           GGNE    +  VEEF GG   W+K GCYVLV
Sbjct: 327 GGNESYATVKRVEEF-GGIGGWKKLGCYVLV 356


>ref|XP_002324384.1| predicted protein [Populus trichocarpa] gi|222865818|gb|EEF02949.1|
           predicted protein [Populus trichocarpa]
          Length = 399

 Score =  105 bits (262), Expect = 4e-21
 Identities = 54/91 (59%), Positives = 63/91 (69%)
 Frame = +3

Query: 57  VVQREVVLVGGMEAVWDEKNVVDGTIWFKSFGSKGEEVSVGLSSEIVVRMKWEEERCGCV 236
           VVQRE V V G EA  D++N VDG +WF+S G  G E SVGLS EIV  MKWE+ER G +
Sbjct: 281 VVQRETVAVAGREAAPDKRNAVDGVMWFRSSGDVGGEASVGLSLEIVGGMKWEQERAGWL 340

Query: 237 GGNEREVRLNIVEEFKGGAEQWQKFGCYVLV 329
           GG   +V +  VEEF GG   W+KFGCYVLV
Sbjct: 341 GGGGSDVTVKRVEEF-GGVGGWKKFGCYVLV 370


>gb|AFK44365.1| unknown [Lotus japonicus]
          Length = 395

 Score =  104 bits (259), Expect = 9e-21
 Identities = 51/91 (56%), Positives = 67/91 (73%)
 Frame = +3

Query: 57  VVQREVVLVGGMEAVWDEKNVVDGTIWFKSFGSKGEEVSVGLSSEIVVRMKWEEERCGCV 236
           VVQ+EVV++ G EAV D  +V +G +WF SF + GE+ SVGLS+ IV RMKWE+ER G +
Sbjct: 279 VVQKEVVVIAGWEAVMDRMDVAEGLLWFNSFNNVGEKNSVGLSTAIVERMKWEQERVGWI 338

Query: 237 GGNEREVRLNIVEEFKGGAEQWQKFGCYVLV 329
           GG E +VR  +V+ F+ G   W+KFGCYVLV
Sbjct: 339 GGKENQVR--VVKSFE-GTNGWKKFGCYVLV 366


>ref|XP_002514528.1| conserved hypothetical protein [Ricinus communis]
           gi|223546132|gb|EEF47634.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 331

 Score =  103 bits (257), Expect = 1e-20
 Identities = 55/110 (50%), Positives = 69/110 (62%), Gaps = 6/110 (5%)
 Frame = +3

Query: 18  QLSTVREKFKTG------CVVQREVVLVGGMEAVWDEKNVVDGTIWFKSFGSKGEEVSVG 179
           ++ T     KTG       VV+ E V VGG E + DEK VVDG +WF+     G E SVG
Sbjct: 194 RIFTCENNHKTGNAVAVDLVVETEAVAVGGEEILHDEKKVVDGVVWFRGLDIVGGEASVG 253

Query: 180 LSSEIVVRMKWEEERCGCVGGNEREVRLNIVEEFKGGAEQWQKFGCYVLV 329
           LS  IV RMKWE+ R G + G ER+VR+  +EEF GG  +W+KFGCYVL+
Sbjct: 254 LSLAIVERMKWEQVRFGWIDGYERKVRVTKLEEF-GGIGEWKKFGCYVLI 302


>ref|XP_003518820.1| PREDICTED: uncharacterized protein LOC100783984 [Glycine max]
          Length = 396

 Score =  102 bits (254), Expect = 3e-20
 Identities = 48/91 (52%), Positives = 68/91 (74%)
 Frame = +3

Query: 57  VVQREVVLVGGMEAVWDEKNVVDGTIWFKSFGSKGEEVSVGLSSEIVVRMKWEEERCGCV 236
           VVQ+EVV++ G EAV +E ++ +G +WF S  + GE+ SVGLS+ +V RMKWE+ER G  
Sbjct: 278 VVQKEVVVIAGWEAVINEMDIAEGFVWFNSVNNVGEKSSVGLSTAVVERMKWEQERVGWN 337

Query: 237 GGNEREVRLNIVEEFKGGAEQWQKFGCYVLV 329
           GG E+++R+  VEEF+ G   W+KFGC+VLV
Sbjct: 338 GGIEKQIRVKKVEEFE-GTNGWKKFGCFVLV 367


Top