BLASTX nr result

ID: Bupleurum21_contig00022975 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022975
         (873 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631388.1| PREDICTED: uncharacterized protein LOC100853...   121   2e-25
emb|CAN65659.1| hypothetical protein VITISV_000953 [Vitis vinifera]   118   2e-24
emb|CBI34669.3| unnamed protein product [Vitis vinifera]              109   7e-22
ref|XP_002304496.1| predicted protein [Populus trichocarpa] gi|2...    83   9e-14
ref|XP_002509806.1| mitochondrial carrier protein, putative [Ric...    60   7e-07

>ref|XP_003631388.1| PREDICTED: uncharacterized protein LOC100853340 [Vitis vinifera]
          Length = 703

 Score =  121 bits (303), Expect = 2e-25
 Identities = 79/281 (28%), Positives = 138/281 (49%), Gaps = 6/281 (2%)
 Frame = +2

Query: 5   PKKQKPSIKYKHNQIGGEFYELTESNREDYAPRPCAINQLNGKKYESKSAEIVRTSDLIS 184
           PK+ +PS  Y++  +    +E      EDY       +    K  ESKS EI+ T++LIS
Sbjct: 8   PKRDQPSTNYRYKSLKQASFEFVH---EDYGGTLPDNDNRRAKVMESKSCEILSTAELIS 64

Query: 185 AIGHLWDTAVLP-PVLKSKVNIDHHTMNLKKGNTVCY-STKGHIDASTSAEGQYLSVNVL 358
           A+G +WD A  P  + + K N  H+  +  K   +CY   +G++   TSA  +Y  +++ 
Sbjct: 65  AVGQIWDCASRPLSIFQPKANSKHNDTDSNKEKVLCYLGGEGYVRVPTSANSKYFCIDLK 124

Query: 359 PASHSLPASRESVECLKATQKLSFFKPGNNRYVNSCFWTLKRYGFSNPIESCMDIGEARL 538
            AS   P  + ++E L  TQK+S F+PGN    +S F    R G + P E+  ++G   +
Sbjct: 125 TASLFSPMVQPNIEHLNITQKMSLFEPGNGNNAHSFFLRCLRGGANMPNETWKEMGLTNV 184

Query: 539 GNLHKLKDIYRLLSETTPARSKHQVNFDDTNKMQNQDCCNTGQRNST--CSNSSDATLPS 712
           G  + L +IYR +S+ T    +  V+      M+ ++CC +    +T  C  + D  +P+
Sbjct: 185 GISYDLGNIYRWMSKITLDTLRSPVDITQIENMKTKECCISKDATNTAGCGINIDVAIPA 244

Query: 713 K--SVRNANCLPETVKASSSLPVPCMESSMDKQTYITSVCS 829
              +  +A+C     + + +      E  M+    I+S+C+
Sbjct: 245 NHPATESADCYTGVTEGNGA-----NERVMNIGVSISSLCT 280


>emb|CAN65659.1| hypothetical protein VITISV_000953 [Vitis vinifera]
          Length = 1742

 Score =  118 bits (296), Expect = 2e-24
 Identities = 78/281 (27%), Positives = 137/281 (48%), Gaps = 6/281 (2%)
 Frame = +2

Query: 5    PKKQKPSIKYKHNQIGGEFYELTESNREDYAPRPCAINQLNGKKYESKSAEIVRTSDLIS 184
            PK+ +PS  Y++  +    +E      EDY       +    K  ESKS EI+ T++LIS
Sbjct: 1117 PKRDQPSTNYRYKSLKQASFEFVH---EDYGGTLPDNDNRRAKVXESKSCEILSTAELIS 1173

Query: 185  AIGHLWDTAVLP-PVLKSKVNIDHHTMNLKKGNTVCY-STKGHIDASTSAEGQYLSVNVL 358
            A+G +WD A  P  + + K N  H+  +  K   +CY   +G++   TSA  +Y  +++ 
Sbjct: 1174 AVGQIWDXASRPLSIFQPKANSKHNDTDSNKEKVLCYLGGEGYVRVPTSANSKYFCIDLK 1233

Query: 359  PASHSLPASRESVECLKATQKLSFFKPGNNRYVNSCFWTLKRYGFSNPIESCMDIGEARL 538
             AS   P  + ++E L  TQK+S F+PGN    +S F      G + P E+  ++G   +
Sbjct: 1234 TASLFSPMVQPNIEHLNITQKMSLFEPGNGNNAHSFFLRCLXGGANMPNETWKEMGLTNV 1293

Query: 539  GNLHKLKDIYRLLSETTPARSKHQVNFDDTNKMQNQDCCNTGQRNST--CSNSSDATLPS 712
            G  + L +IYR +S+ T    +  V+      M+ ++CC +    +T  C  + D  +P+
Sbjct: 1294 GISYDLGNIYRWMSKITLDTLRSPVDITQIENMKXKECCISKDATNTAGCGINIDVAIPA 1353

Query: 713  K--SVRNANCLPETVKASSSLPVPCMESSMDKQTYITSVCS 829
               +  +A+C     + + +      E  M+    I+S+C+
Sbjct: 1354 NHPATESADCYTGVTEGNGA-----NERVMNIGVSISSLCT 1389


>emb|CBI34669.3| unnamed protein product [Vitis vinifera]
          Length = 615

 Score =  109 bits (273), Expect = 7e-22
 Identities = 69/236 (29%), Positives = 121/236 (51%), Gaps = 6/236 (2%)
 Frame = +2

Query: 140 ESKSAEIVRTSDLISAIGHLWDTAVLP-PVLKSKVNIDHHTMNLKKGNTVCY-STKGHID 313
           ESKS EI+ T++LISA+G +WD A  P  + + K N  H+  +  K   +CY   +G++ 
Sbjct: 2   ESKSCEILSTAELISAVGQIWDCASRPLSIFQPKANSKHNDTDSNKEKVLCYLGGEGYVR 61

Query: 314 ASTSAEGQYLSVNVLPASHSLPASRESVECLKATQKLSFFKPGNNRYVNSCFWTLKRYGF 493
             TSA  +Y  +++  AS   P  + ++E L  TQK+S F+PGN    +S F    R G 
Sbjct: 62  VPTSANSKYFCIDLKTASLFSPMVQPNIEHLNITQKMSLFEPGNGNNAHSFFLRCLRGGA 121

Query: 494 SNPIESCMDIGEARLGNLHKLKDIYRLLSETTPARSKHQVNFDDTNKMQNQDCCNTGQRN 673
           + P E+  ++G   +G  + L +IYR +S+ T    +  V+      M+ ++CC +    
Sbjct: 122 NMPNETWKEMGLTNVGISYDLGNIYRWMSKITLDTLRSPVDITQIENMKTKECCISKDAT 181

Query: 674 ST--CSNSSDATLPSK--SVRNANCLPETVKASSSLPVPCMESSMDKQTYITSVCS 829
           +T  C  + D  +P+   +  +A+C     + + +      E  M+    I+S+C+
Sbjct: 182 NTAGCGINIDVAIPANHPATESADCYTGVTEGNGA-----NERVMNIGVSISSLCT 232


>ref|XP_002304496.1| predicted protein [Populus trichocarpa] gi|222841928|gb|EEE79475.1|
           predicted protein [Populus trichocarpa]
          Length = 620

 Score = 82.8 bits (203), Expect = 9e-14
 Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 2/201 (0%)
 Frame = +2

Query: 20  PSIKYKHNQIGGEFYELTESNREDYAPRPCAINQLNGKKYESKSAEIVRTSDLISAIGHL 199
           PSI YK N+ GG  ++L +   + ++P     N+ +  K  + S EI  T++L+SA+G +
Sbjct: 14  PSITYKRNRNGGMPFDLADFVHDGHSPSISENNKPDDIKSGTSSPEIFSTTELVSAVGQV 73

Query: 200 WD--TAVLPPVLKSKVNIDHHTMNLKKGNTVCYSTKGHIDASTSAEGQYLSVNVLPASHS 373
           W+       P  K + N+  + +N              +D +T    +Y  V++   SH 
Sbjct: 74  WNLLNPCAVPETKEQKNVILNDLNGAGAGGAAI-----LDDNT----KYFCVDIRNGSHV 124

Query: 374 LPASRESVECLKATQKLSFFKPGNNRYVNSCFWTLKRYGFSNPIESCMDIGEARLGNLHK 553
               +   E LK T+K+  F+P +  Y  S FW   + G S+  ES    G A +G  ++
Sbjct: 125 TQMVQPQFEFLKVTKKMLVFEPSSENYSRSLFWRFLKRGTSSRNESREGKGLATVGTGYE 184

Query: 554 LKDIYRLLSETTPARSKHQVN 616
           L  IY  + E  PA SK+  N
Sbjct: 185 LDKIYGWMKELIPAGSKYPAN 205


>ref|XP_002509806.1| mitochondrial carrier protein, putative [Ricinus communis]
           gi|223549705|gb|EEF51193.1| mitochondrial carrier
           protein, putative [Ricinus communis]
          Length = 663

 Score = 60.1 bits (144), Expect = 7e-07
 Identities = 44/159 (27%), Positives = 75/159 (47%), Gaps = 3/159 (1%)
 Frame = +2

Query: 2   PPKKQKPSIKYKHNQIGGEFYELTESNREDYAPRPCAINQLNGKKYESKSAEIVRTSDLI 181
           PP   +PSI YK N++      + + N E++A +    +Q   +  E K+ E++ T++LI
Sbjct: 7   PPPIDRPSITYKWNKVEKGSSGVADFNIEEHASKH---SQKKNQSAEPKNPELLSTTELI 63

Query: 182 SAIGHLWDTAVLPPVLKSKVNIDHHTMNLKKGNTVCYSTKGHIDASTSAE---GQYLSVN 352
           SA+ H+WD        + K   DH+T   +K   +       +D     +   G   SV+
Sbjct: 64  SAVEHIWD--------RVKEKPDHNTSGSQKNVILGDLIAVDVDLGAFKDDDGGSCFSVD 115

Query: 353 VLPASHSLPASRESVECLKATQKLSFFKPGNNRYVNSCF 469
           V   S+   + +  +E L  TQK+S F+P + R     F
Sbjct: 116 VWNDSNITTSVQTKLEFLSVTQKMSTFEPCSKRCTRPLF 154


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