BLASTX nr result

ID: Bupleurum21_contig00022956 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022956
         (1041 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309551.1| predicted protein [Populus trichocarpa] gi|2...    91   4e-16
emb|CAN71330.1| hypothetical protein VITISV_031551 [Vitis vinifera]    84   4e-14
emb|CAX46395.1| putative EMF1 protein [Rosa lucieae]                   84   7e-14
ref|XP_002516553.1| hypothetical protein RCOM_0802530 [Ricinus c...    82   2e-13
ref|XP_002324808.1| predicted protein [Populus trichocarpa] gi|2...    80   6e-13

>ref|XP_002309551.1| predicted protein [Populus trichocarpa] gi|222855527|gb|EEE93074.1|
            predicted protein [Populus trichocarpa]
          Length = 1309

 Score = 91.3 bits (225), Expect = 4e-16
 Identities = 92/305 (30%), Positives = 136/305 (44%), Gaps = 15/305 (4%)
 Frame = +3

Query: 132  SQGSNFSQKVAGQRSDIAAYIPSPELRKGKTVRDLDLNFADPNDQDVGLMPACPFVANTK 311
            S GSN  + + G R     ++       GK  R    NF   ++  +      PF     
Sbjct: 975  SSGSNLKENMNGDRE--LKFLNKNAANLGKQNR----NFG--SETLIRARSEYPFAGKHN 1026

Query: 312  GRDLEQKNMESLHSFSSETIPAMQLLSLMDAETQSRPSFGVDA-EKDLENPFQHRNPHPN 488
            G +L QK + SL  +S+ETIPAM LLSLMDA  QS     +D   K L+ P    NP P 
Sbjct: 1027 GIELNQKPIGSLDLYSNETIPAMHLLSLMDAGVQSSAPINMDVNSKFLKRPSITHNPEPK 1086

Query: 489  R--RMNERA--SLITKPLFPQNHLVK----ENSESGLSMYRSNASTRNVSSAYYGSDIVI 644
               R++  A  ++ T    P NH  K    EN    + + ++ A   + S  +       
Sbjct: 1087 EFSRLDTGAFKAVNTVKHPPPNHHGKNQLAENFRDHIPVIQTTAGASSSSILHDKGIRKA 1146

Query: 645  SQQPGNGIKPCFPQQNTDWRSRTPVG---TSGIPDMMTDCS--PYQAKQKGILGTSADVV 809
            +  P   ++    ++ +D R++  V     S      T+C   P    Q    G S   +
Sbjct: 1147 TDFPIQVVQDKDKRKGSDSRTQNKVNRSQKSAYGGFGTNCGSIPAHNMQTMFYGASDSSM 1206

Query: 810  VPLQ-HVLKIPENHKDAGSYHMHGTLESLRDTSKEEGCNVNRNPADFTIPGAENRFMIEG 986
             PL    L+ P  HK   S   + T+ + + +S+ E C+VNRNPADFT+P A N +MI G
Sbjct: 1207 FPLPFRALEKPNKHK-LESPANNRTVHAHKSSSETEVCSVNRNPADFTVPEAGNMYMIVG 1265

Query: 987  ANLIF 1001
             +L F
Sbjct: 1266 EDLKF 1270


>emb|CAN71330.1| hypothetical protein VITISV_031551 [Vitis vinifera]
          Length = 1388

 Score = 84.3 bits (207), Expect = 4e-14
 Identities = 95/379 (25%), Positives = 144/379 (37%), Gaps = 57/379 (15%)
 Frame = +3

Query: 66   HNGLQHSGISANFWASGPLNVVSQGSNFSQKVAGQRSDIAAYIPSPE-LRKGKTVRDLDL 242
            +N  Q S  +A+ W++   N ++ G +  Q+ A   +++     S   L K K   + DL
Sbjct: 1006 YNAPQQSEEAAHVWSAMTPNHMAFGFSIPQECATHSNNMDMISHSSNMLHKRKMTGEQDL 1065

Query: 243  NFADPNDQDVGLMPAC-------------PFVANTKGRDLEQKNMESLHSFSSETIPAMQ 383
             F + N  D+                   PF     G  L  K + SL  +S+E IPAM 
Sbjct: 1066 KFLNSNAFDLEKQNRSIGSETLNRAHVEYPFACKDNGIKLHPKLVGSLDLYSNENIPAMH 1125

Query: 384  LLSLMDAETQSRPSFGVDAEKDLENPFQHRNPHPNRRMNERASLITKPLFPQNHLVKENS 563
            LLSLMD+  QSR  F +D +                     +  + K  FP+++  +E S
Sbjct: 1126 LLSLMDSGMQSRTPFSMDGD---------------------SKFLKKSAFPRDYDSREFS 1164

Query: 564  ESGLSMYRSNASTRNVSSAYYGSD------------------IVISQQPGNGIKPCF--- 680
               +  Y++  S+R  SS + G +                     S Q     KP     
Sbjct: 1165 GLEIGAYKARNSSRQPSSDHCGKNHLAERSCACSLAVTSVGAFASSSQKDGNFKPAGLID 1224

Query: 681  -----------------PQQNTDWRSRTPVGTSG-IPDMMTDCSPYQAKQKGILGTSADV 806
                             P QN    SR    T G       +  P    QK   G S  +
Sbjct: 1225 QVLPRSRGKEKSKVLPPPIQNRGCTSRKSSSTCGDYSGTNHESIPIHDTQKRFPGASNSM 1284

Query: 807  VVPLQ-HVLKIPENHKDAGSYHMH---GTLESLRDTSKEEGCNVNRNPADFTIPGAENRF 974
              PLQ H +   EN  +  +   H   GT   +   S+ E C++N+NPADF++P A N +
Sbjct: 1285 RFPLQPHTI---ENSIECIALETHCNGGTFWPINSRSETEICSINKNPADFSVPVAGNIY 1341

Query: 975  MIEGANLIFSNYFTNSRIN 1031
            MI   +L F    ++   N
Sbjct: 1342 MIGAEDLKFGKSISSENRN 1360


>emb|CAX46395.1| putative EMF1 protein [Rosa lucieae]
          Length = 483

 Score = 83.6 bits (205), Expect = 7e-14
 Identities = 88/306 (28%), Positives = 129/306 (42%), Gaps = 38/306 (12%)
 Frame = +3

Query: 153  QKVAGQRSDIAAYIPSP-ELRKGKTVRDLDL--NFADPN----DQDVG------LMPACP 293
            QK   Q S++     SP  L+KG    D DL  N   PN    ++ VG        P   
Sbjct: 187  QKGPAQSSNVKMVSQSPGSLQKGNATGDCDLSLNLNAPNFEKRNEAVGSETISRTNPEYS 246

Query: 294  FVANTKGRDLEQKNMESLHSFSSETIPAMQLLSLMDAETQSRPSFGVDAEKDLENPFQHR 473
            F     G +  Q ++ SL  +S+ETIPAM LLSLMDA  +S  S  +       NP   +
Sbjct: 247  FTCKRNGTEPHQNSLGSLDLYSNETIPAMHLLSLMDAGMRSGASLNMGG-----NPKFPK 301

Query: 474  NPHPNR-----------RMNERASLITKP---LFPQNHLVKENSESGLSMYRSNASTRNV 611
             P PN             + + A  +  P    + +NHL    SE  L ++ +N +    
Sbjct: 302  RPFPNDLNSKGYPGLDIGLYKAADTVNHPSSNCYGKNHL----SEKSLDLFPTNPTFGAS 357

Query: 612  SSAYYGS----------DIVISQQPGNGIKPCF-PQQNTDWRSRTPVGTSGIPDMMTDCS 758
            SS++  S          D V S Q    I+    P QN   RS+  +   G         
Sbjct: 358  SSSFEHSKSFGRATDFMDQVSSSQKKEKIQRSHSPAQNRGPRSQKSLAADGGFGNNRTTI 417

Query: 759  PYQAKQKGILGTSADVVVPLQHVLKIPENHKDAGSYHMHGTLESLRDTSKEEGCNVNRNP 938
            P  +  KG L  S  ++ PL +         +  + + +GT++  + +S+   C +NRNP
Sbjct: 418  PVHSIPKGFLPVSGPLMFPLHYHTIANSRKHNLETPNANGTMKPPKTSSESSICCMNRNP 477

Query: 939  ADFTIP 956
            ADFTIP
Sbjct: 478  ADFTIP 483


>ref|XP_002516553.1| hypothetical protein RCOM_0802530 [Ricinus communis]
            gi|223544373|gb|EEF45894.1| hypothetical protein
            RCOM_0802530 [Ricinus communis]
          Length = 1310

 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 87/292 (29%), Positives = 124/292 (42%), Gaps = 30/292 (10%)
 Frame = +3

Query: 210  RKGKTVRDLDLNFADPN---DQDVGLMPACPFVANTKGRDLEQKNMESLHSFSSETIPAM 380
            R+ K +     NF   N     DV    A PF     G DL QK M S   +S+ETIPAM
Sbjct: 993  REFKFLNQSAANFGKQNRAFGSDVLKTCADPFACKHNGIDLTQKPMGSFDLYSNETIPAM 1052

Query: 381  QLLSLMDAETQSRPSFGVD-AEKDLENPFQHRNPHPNR--RMNERASLITKPL------F 533
             LLSLMDA  QS     +D   K  + P    +  P    R++  A  +T  +       
Sbjct: 1053 HLLSLMDAGLQSGAPINLDMTPKFFKRPSATHDQDPKEFSRLDSGAYKVTNTMKHTPYEC 1112

Query: 534  PQNHLVKENSESGLS----MYRSNASTRNVSSAY-YGSDIV--ISQQPGNGIKPCFPQQN 692
               +   E+S   LS    +   +AS+ +  + +   +D    +SQ+   G       QN
Sbjct: 1113 HGKNQAAEDSHGRLSTIPVVVGPSASSFSHDTCFKKATDFTCQVSQEKVKGKGSDSRTQN 1172

Query: 693  TDWRSRTPVGTSGIPDMMTDCS--PYQAKQKGILGTSADVVVPLQ---------HVLKIP 839
            + +RS+  V  SG  +  T+C   P    Q    G S   + PLQ         H  K+P
Sbjct: 1173 SGYRSQKSVSPSG--NFGTNCGSIPVHRMQTMFFGASDSRMFPLQFRGLETSTKHKFKVP 1230

Query: 840  ENHKDAGSYHMHGTLESLRDTSKEEGCNVNRNPADFTIPGAENRFMIEGANL 995
               +   S+           +S +  C+VNRNPADF+ PG  N +MI G +L
Sbjct: 1231 SGTRPVHSH----------KSSSDGICSVNRNPADFSTPGPGNLYMISGEDL 1272


>ref|XP_002324808.1| predicted protein [Populus trichocarpa] gi|222866242|gb|EEF03373.1|
            predicted protein [Populus trichocarpa]
          Length = 540

 Score = 80.5 bits (197), Expect = 6e-13
 Identities = 82/257 (31%), Positives = 111/257 (43%), Gaps = 20/257 (7%)
 Frame = +3

Query: 291  PFVANTKGRDLEQKNMESLHSFSSETIPAMQLLSLMDAETQSRPSFGVDAE-KDLENPFQ 467
            PF     G +L  K M SL  +S+ETIPAM LLSLMDA  QS     +D   K L+ P  
Sbjct: 254  PFAGKHNGIELNHKPMGSLELYSNETIPAMHLLSLMDAGVQSSAPINMDVNPKFLKRPAI 313

Query: 468  HRNPHPNR--RMNERA----SLITKPLFPQNHLVKEN-SESGLSMYRSNASTRNVSSAYY 626
              N  P    R++  A    S +  P  P+NH  K   +ES   +     +T   SS   
Sbjct: 314  IHNAEPKEFSRLDTGAYKVISSVKHP--PRNHNGKNQLAESSRDLIPIMQTTAGASSLSI 371

Query: 627  GSDIVISQQ---PGNGIKPCFPQQNTDWRSRTPVG---TSGIPDMMTDCSPYQAKQKGIL 788
              D  I +    P   I+    ++ +D R++       TS      T+C    A    I+
Sbjct: 372  RHDKRIRKPVDLPSPVIQYKERRKGSDSRTQNKANRSQTSANGGFGTNCGSIPAHSMRIM 431

Query: 789  GTSADVVVPLQHVLKIP------ENHKDAGSYHMHGTLESLRDTSKEEGCNVNRNPADFT 950
               A    P   V  +P       N     S   +  +   + +S+ E C+VNRNPADFT
Sbjct: 432  SFGA----PDPSVFSLPFRALENPNKDKLKSLDNNRIVHPHKSSSETEVCSVNRNPADFT 487

Query: 951  IPGAENRFMIEGANLIF 1001
            IP A N +MI G  L F
Sbjct: 488  IPEAGNMYMIAGEALRF 504


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