BLASTX nr result

ID: Bupleurum21_contig00022946 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022946
         (553 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282776.1| PREDICTED: uncharacterized protein LOC100267...   113   2e-23
gb|ABK93486.1| unknown [Populus trichocarpa]                           98   1e-18
ref|XP_002331893.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_002300204.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_004163882.1| PREDICTED: uncharacterized protein LOC101224...    95   8e-18

>ref|XP_002282776.1| PREDICTED: uncharacterized protein LOC100267710 [Vitis vinifera]
           gi|296088617|emb|CBI37608.3| unnamed protein product
           [Vitis vinifera]
          Length = 285

 Score =  113 bits (283), Expect = 2e-23
 Identities = 57/104 (54%), Positives = 75/104 (72%), Gaps = 4/104 (3%)
 Frame = +3

Query: 21  MPRWRNVLLLKNSVMQPTISAP-SSSLHFASIHSTPSSCEKWKRKWDPDSKGHQPSKPYI 197
           +PRWR V + KNS+   +I A  SSS HFAS HSTP + EKWK KW+ D   HQPSK YI
Sbjct: 3   VPRWRYVFISKNSLTPFSIRAAISSSSHFASFHSTPVASEKWKNKWNHDFTSHQPSKNYI 62

Query: 198 KYETRQKRSDAKKALKNLLFHNGSCKTTFED---VHKVETANMW 320
           +Y +RQKR+DA++ALK+LLF+NGS K +F+D     K++ A+ W
Sbjct: 63  RYASRQKRTDARRALKDLLFNNGSPKFSFQDEDSTWKIDGASSW 106


>gb|ABK93486.1| unknown [Populus trichocarpa]
          Length = 268

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 48/86 (55%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
 Frame = +3

Query: 12  VQVMPRWRNVLLLKNSVMQPTISAPSSSLHFASIHSTPSSCEKWKRKWDPDSKGHQ-PSK 188
           +  MPRWRNV+LLKNS++  +  + ++  HFASIHSTP +CEK K K   D++G Q PSK
Sbjct: 2   IMQMPRWRNVILLKNSLVPASSQSITTRTHFASIHSTPIACEKRKSKRVDDNRGSQKPSK 61

Query: 189 PYIKYETRQKRSDAKKALKNLLFHNG 266
            YIK+  RQKR+D K+ALK+LL++NG
Sbjct: 62  DYIKFVRRQKRADEKRALKDLLYNNG 87


>ref|XP_002331893.1| predicted protein [Populus trichocarpa] gi|222874642|gb|EEF11773.1|
           predicted protein [Populus trichocarpa]
          Length = 264

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 48/83 (57%), Positives = 64/83 (77%), Gaps = 1/83 (1%)
 Frame = +3

Query: 21  MPRWRNVLLLKNSVMQPTISAPSSSLHFASIHSTPSSCEKWKRKWDPDSKGHQ-PSKPYI 197
           MPRWRNV+LLKNS++  +  + ++  HFASIHSTP +CEK K K   D++G Q PSK YI
Sbjct: 1   MPRWRNVILLKNSLVPASSQSITTRTHFASIHSTPIACEKRKSKRVDDNRGSQKPSKDYI 60

Query: 198 KYETRQKRSDAKKALKNLLFHNG 266
           K+  RQKR+D K+ALK+LL++NG
Sbjct: 61  KFVRRQKRADEKRALKDLLYNNG 83


>ref|XP_002300204.1| predicted protein [Populus trichocarpa] gi|222847462|gb|EEE85009.1|
           predicted protein [Populus trichocarpa]
          Length = 267

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 46/97 (47%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
 Frame = +3

Query: 21  MPRWRNVLLLKNSVMQPTISAPSSSLHFASIHSTPSSCEKWKRKWDPDSKG-HQPSKPYI 197
           +PRWRNVL+LKNS++     + ++  HFASIHSTP +C+K K K D D +G  QPSK YI
Sbjct: 3   IPRWRNVLILKNSLVPALSQSITTKNHFASIHSTPITCDKRKSKRDGDERGSQQPSKAYI 62

Query: 198 KYETRQKRSDAKKALKNLLFHNGSCKTTFEDVHKVET 308
           +Y  RQK S AK+AL+ LL+++G  +++F+ +  +++
Sbjct: 63  RYSIRQKPSAAKRALQGLLYNSGVSRSSFQHIEPIQS 99


>ref|XP_004163882.1| PREDICTED: uncharacterized protein LOC101224255 [Cucumis sativus]
          Length = 283

 Score = 94.7 bits (234), Expect = 8e-18
 Identities = 46/86 (53%), Positives = 63/86 (73%), Gaps = 2/86 (2%)
 Frame = +3

Query: 18  VMPRWRNVLLLKNSVMQPTISAPSSSLHFASIHSTPSSCEKWKRKWDPDSKGH--QPSKP 191
           ++PR+R   +L+NS +  T +A     H AS HSTP+SC+KW+ KW  D  GH  +PSK 
Sbjct: 2   LIPRFRPSFILQNSFIGSTFAAT----HVASFHSTPTSCDKWRSKWKFDGGGHGKEPSKS 57

Query: 192 YIKYETRQKRSDAKKALKNLLFHNGS 269
           Y++Y TRQKR+DAKKALKNLL+++GS
Sbjct: 58  YVRYVTRQKRADAKKALKNLLYNSGS 83


Top