BLASTX nr result

ID: Bupleurum21_contig00022906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022906
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37944.3| unnamed protein product [Vitis vinifera]               68   7e-10
emb|CBI25486.3| unnamed protein product [Vitis vinifera]               59   3e-07
ref|NP_190257.1| putative disease resistance RPP13-like protein ...    57   1e-06
emb|CAN77098.1| hypothetical protein VITISV_037080 [Vitis vinifera]    56   3e-06
ref|XP_002336919.1| cc-nbs-lrr resistance protein [Populus trich...    56   3e-06

>emb|CBI37944.3| unnamed protein product [Vitis vinifera]
          Length = 787

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 43/105 (40%), Positives = 60/105 (57%), Gaps = 10/105 (9%)
 Frame = +2

Query: 2   DELAHRSLVQVETDNFQGASSSKYMSCRVHDLIRDLCLSKAKEEKFIDVIHLKHKPEDEF 181
           DEL  R +VQV   NF G    +  +CR+HDL+RDLCLSKAKEE F+   HL+HK +   
Sbjct: 409 DELIERCMVQVGRRNFIG----RVKTCRLHDLMRDLCLSKAKEENFLQATHLRHKNDPVA 464

Query: 182 RAS----------MVRRLCIRFVDEQLESMLNCYDQHVISHIRSL 286
            +S           +RRL I ++DE +   ++  +    SH+RSL
Sbjct: 465 ASSSMVPIVTPMAKIRRLAI-YLDEGVNRCISS-EYEKSSHLRSL 507


>emb|CBI25486.3| unnamed protein product [Vitis vinifera]
          Length = 1424

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 3/113 (2%)
 Frame = +2

Query: 2   DELAHRSLVQVETDNFQGASSSKYMSCRVHDLIRDLCLSKAKEEKFIDVIHLKHKPEDEF 181
           DEL  R +VQV     + +S+ +  +CR+HDL+RDLCLSKA+EE F+++++L+    + F
Sbjct: 482 DELIGRCMVQVG----RRSSNGRVNTCRLHDLMRDLCLSKAQEENFLEIVNLQQM--ETF 535

Query: 182 RASMVRRLCIRFVDEQLESMLNCYDQHVISH---IRSLYVWKEYAGTEVVPQW 331
             SM        V     S +N   Q+VI     +R LY+  E        QW
Sbjct: 536 SFSMPTTRTSNKVRRHANSYVNLNPQNVIGRMKWLRHLYLPLELKVDNSKVQW 588



 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 27/64 (42%), Positives = 44/64 (68%)
 Frame = +2

Query: 2    DELAHRSLVQVETDNFQGASSSKYMSCRVHDLIRDLCLSKAKEEKFIDVIHLKHKPEDEF 181
            DEL  R ++QV     +  S+ +  +CR+HDL+RDLCLSKA+EE F+++++L+    + F
Sbjct: 1059 DELIGRCMIQVG----RRGSNGRVQTCRLHDLMRDLCLSKAEEENFLEIVNLQQM--ETF 1112

Query: 182  RASM 193
             +SM
Sbjct: 1113 SSSM 1116


>ref|NP_190257.1| putative disease resistance RPP13-like protein 3 [Arabidopsis
           thaliana] gi|29839682|sp|Q9STE7.1|R13L3_ARATH RecName:
           Full=Putative disease resistance RPP13-like protein 3
           gi|5541686|emb|CAB51192.1| putative protein [Arabidopsis
           thaliana] gi|332644677|gb|AEE78198.1| putative disease
           resistance RPP13-like protein 3 [Arabidopsis thaliana]
          Length = 847

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 35/87 (40%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
 Frame = +2

Query: 2   DELAHRSLVQVETDNFQGASSSKYMSCRVHDLIRDLCLSKAKEEKFIDVIHLKHKPEDEF 181
           DEL  RSLV+ E          K MSCR+HDL+RDL + KAKE  F++V + K    D  
Sbjct: 465 DELVDRSLVKAER-----IERGKVMSCRIHDLLRDLAIKKAKELNFVNVYNEKQHSSDIC 519

Query: 182 RASMVRR------LCIRFVDEQLESML 244
           R  +V        LC R V++++ S L
Sbjct: 520 RREVVHHLMNDYYLCDRRVNKRMRSFL 546


>emb|CAN77098.1| hypothetical protein VITISV_037080 [Vitis vinifera]
          Length = 391

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 37/81 (45%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
 Frame = +2

Query: 62  SSKYMSCRVHDLIRDLCLSKAKEEKFIDVIHL----KHKPEDEFRASMVRRLCIRFVD-- 223
           S    +CR+ DL+RDLCLSKAKEE F++VIHL    K   ED  +   +R+L I  +   
Sbjct: 191 SGNVTTCRLLDLMRDLCLSKAKEENFLEVIHLQDGNKTAIEDLVKLKNLRKLHIHAIKSI 250

Query: 224 EQLESMLNCYDQHVISHIRSL 286
           EQLE + N     V+  IRSL
Sbjct: 251 EQLEVIFNA-PSPVLQRIRSL 270


>ref|XP_002336919.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222837129|gb|EEE75508.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 605

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 39/113 (34%), Positives = 61/113 (53%), Gaps = 12/113 (10%)
 Frame = +2

Query: 5   ELAHRSLVQVETDNFQGASSSKYMSCRVHDLIRDLCLSKAKEEKFIDVIH---LKHKPED 175
           EL  R +VQV     +  ++ +  +CR+HDL+RDLC+SKAK+E F++V +       P D
Sbjct: 331 ELVERCMVQV----VERGTTGRIRTCRMHDLMRDLCVSKAKQENFLEVFNQSLASDHPAD 386

Query: 176 EFRASMV---------RRLCIRFVDEQLESMLNCYDQHVISHIRSLYVWKEYA 307
            F  SMV         RRL +    +  + + + Y ++  SH+RSL  + E A
Sbjct: 387 SFPWSMVREARSIGRLRRLAVVLEGDLHKFIPSGYKRN--SHLRSLLYFHEKA 437


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