BLASTX nr result

ID: Bupleurum21_contig00022888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022888
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281541.2| PREDICTED: THO complex subunit 2-like [Vitis...    98   6e-19
ref|XP_002328963.1| predicted protein [Populus trichocarpa] gi|2...    98   6e-19
ref|XP_002527536.1| tho2 protein, putative [Ricinus communis] gi...    92   4e-17
ref|XP_002325475.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_003530933.1| PREDICTED: uncharacterized protein C1D4.14-l...    79   3e-13

>ref|XP_002281541.2| PREDICTED: THO complex subunit 2-like [Vitis vinifera]
          Length = 1849

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 53/85 (62%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
 Frame = +2

Query: 2    DLKVLATSVGAALAARKSSWVTEEEFGMGHLDLKPALPVAPKSLTNNLAPAHNVSGVTIT 181
            DLKVLAT V AALAARK SWVT+EEFGMG+L+LKPA  +A KSL  NL    N SG+ I 
Sbjct: 1205 DLKVLATGVAAALAARKPSWVTDEEFGMGYLELKPAPSLASKSLAGNLVAVPNGSGLNIF 1264

Query: 182  VNEPTGARPVTTG-QHPDHGNSTKD 253
             NE +G R V +G QH D GNS K+
Sbjct: 1265 QNESSGGRTVASGTQHLDAGNSVKE 1289


>ref|XP_002328963.1| predicted protein [Populus trichocarpa] gi|222839197|gb|EEE77548.1|
            predicted protein [Populus trichocarpa]
          Length = 1805

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 52/86 (60%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
 Frame = +2

Query: 2    DLKVLATSVGAALAARKSSWVTEEEFGMGHLDLKPALPVAPKSLTNNLAPAHNVSGVTIT 181
            DLKVLAT V AALAARK SWVT+EEFGMG+LD+KP   VA KSL+ N+A A N S + ++
Sbjct: 1175 DLKVLATGVAAALAARKPSWVTDEEFGMGYLDIKPP-SVASKSLSGNVAAAQNSSALNVS 1233

Query: 182  VNEPTGARPVTTG-QHPDHGNSTKDP 256
              EP   R + TG QH D GNS +DP
Sbjct: 1234 QGEPADGRALVTGSQHGDPGNSNRDP 1259


>ref|XP_002527536.1| tho2 protein, putative [Ricinus communis] gi|223533086|gb|EEF34845.1|
            tho2 protein, putative [Ricinus communis]
          Length = 1828

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
 Frame = +2

Query: 2    DLKVLATSVGAALAARKSSWVTEEEFGMGHLDLKPALPVAPKSLTNNLAPAHNVSGVTIT 181
            DLKVLATSV +ALAARK SWVT+EEFGMG+LD++P  P A KS++ N++   N SG+  +
Sbjct: 1200 DLKVLATSVASALAARKPSWVTDEEFGMGYLDIRP--PAASKSVSGNISVGQNSSGLNAS 1257

Query: 182  VNEPTGARPV-TTGQHPDHGNSTKD 253
              E  G R V TT QH D GNS K+
Sbjct: 1258 QGESAGGRAVSTTTQHGDVGNSAKE 1282


>ref|XP_002325475.1| predicted protein [Populus trichocarpa] gi|222862350|gb|EEE99856.1|
            predicted protein [Populus trichocarpa]
          Length = 1836

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 48/85 (56%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
 Frame = +2

Query: 2    DLKVLATSVGAALAARKSSWVTEEEFGMGHLDLKPALPVAPKSLTNNLAPAHNVSGVTIT 181
            DLKVLAT V AALAARK SW+T+EEFGMG+L++KP    A KSL+ N A A N S + ++
Sbjct: 1185 DLKVLATGVAAALAARKPSWITDEEFGMGYLEIKPP-SAASKSLSGNAAAAQNSSALNVS 1243

Query: 182  VNEPT-GARPVTTGQHPDHGNSTKD 253
              EP  G  P T  QH D GNST++
Sbjct: 1244 QGEPAEGRAPHTGSQHGDPGNSTRE 1268


>ref|XP_003530933.1| PREDICTED: uncharacterized protein C1D4.14-like [Glycine max]
          Length = 1728

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 46/84 (54%), Positives = 55/84 (65%)
 Frame = +2

Query: 2    DLKVLATSVGAALAARKSSWVTEEEFGMGHLDLKPALPVAPKSLTNNLAPAHNVSGVTIT 181
            DLKVLAT V AALAARK SWVT+EEFGMG+L+LKPA P   KS   N A     SG+ + 
Sbjct: 1112 DLKVLATGVAAALAARKPSWVTDEEFGMGYLELKPA-PSVTKSSAGNSATVQ--SGINLN 1168

Query: 182  VNEPTGARPVTTGQHPDHGNSTKD 253
            V++   A    +G+H D GN  KD
Sbjct: 1169 VSQTESA----SGKHVDSGNIVKD 1188


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