BLASTX nr result

ID: Bupleurum21_contig00022871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022871
         (1181 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519105.1| Protein ariadne-1, putative [Ricinus communi...   513   e-143
ref|XP_004145339.1| PREDICTED: probable E3 ubiquitin-protein lig...   511   e-142
ref|XP_002284665.1| PREDICTED: probable E3 ubiquitin-protein lig...   511   e-142
ref|XP_002313070.1| predicted protein [Populus trichocarpa] gi|2...   499   e-139
ref|XP_002886198.1| hypothetical protein ARALYDRAFT_480784 [Arab...   487   e-135

>ref|XP_002519105.1| Protein ariadne-1, putative [Ricinus communis]
            gi|223541768|gb|EEF43316.1| Protein ariadne-1, putative
            [Ricinus communis]
          Length = 592

 Score =  513 bits (1322), Expect = e-143
 Identities = 233/324 (71%), Positives = 270/324 (83%), Gaps = 1/324 (0%)
 Frame = +2

Query: 212  KTPSMKVITKESLLAAQREDLCRVMELLSLREHHARTLLIHYRWDVEKMIAILVDRDKDY 391
            K P+ K+ITKESLLAAQREDL RVMELLSLREHHARTLLIHYRWDVE++ A+ V++ K +
Sbjct: 37   KGPTTKIITKESLLAAQREDLRRVMELLSLREHHARTLLIHYRWDVERLFAVFVEKGKTF 96

Query: 392  LFSQAGVMLPESRDVNSPV-SSSTVMCIVCMEDVPYIQVTKMDCGHSFCNDCWTEHFIVQ 568
            LF++AGV   E  D ++P+ SSS +MC +C+EDVP  + T+MDC H FCNDCWTEHFIV+
Sbjct: 97   LFTEAGVTGVEQLDRDAPLTSSSIIMCDICIEDVPGNRATRMDCSHCFCNDCWTEHFIVK 156

Query: 569  INEGKSKRIKCMADKCSSICDEAVIRQLVSKRHPGLAEKFERFLLESYIEDNKMVKWCPS 748
            INEG+S+RI+CMA KC++ICDEAV+R LVSKRHP LAE+F+RFLLESYIEDNKMVKWCPS
Sbjct: 157  INEGQSRRIQCMAHKCNAICDEAVVRNLVSKRHPDLAERFDRFLLESYIEDNKMVKWCPS 216

Query: 749  VPHCGNAIRAXXXXXXXXXXXXGLQFCFSCLSEAHSPCSCRMWELWTKKCQTESETVTWI 928
             PHCGNAIR             GLQFCFSCLSEAHSPCSC MWELW+KKC+ ESETV WI
Sbjct: 217  APHCGNAIRVEEDECCEVECSCGLQFCFSCLSEAHSPCSCLMWELWSKKCRDESETVNWI 276

Query: 929  SDHTKACPKCLKPVEKSGGCNLVVCICGQAFCWLCGGPTGRDHTWNSIAGHSCGRFKEES 1108
            + HTK CPKC KPVEK+GGCNLV CICGQAFCWLCGG TG+DHTW+ I+GHSCGR+KE+ 
Sbjct: 277  TVHTKPCPKCHKPVEKNGGCNLVSCICGQAFCWLCGGATGKDHTWSRISGHSCGRYKEDR 336

Query: 1109 SKNSISAKRDLYRYMHYLKRYKAH 1180
             K +  AKRDLYRYMHY  RYKAH
Sbjct: 337  EKKTERAKRDLYRYMHYHNRYKAH 360


>ref|XP_004145339.1| PREDICTED: probable E3 ubiquitin-protein ligase ARI1-like [Cucumis
            sativus] gi|449471519|ref|XP_004153333.1| PREDICTED:
            probable E3 ubiquitin-protein ligase ARI1-like [Cucumis
            sativus] gi|449502370|ref|XP_004161621.1| PREDICTED:
            probable E3 ubiquitin-protein ligase ARI1-like [Cucumis
            sativus]
          Length = 589

 Score =  511 bits (1317), Expect = e-142
 Identities = 233/323 (72%), Positives = 269/323 (83%)
 Frame = +2

Query: 212  KTPSMKVITKESLLAAQREDLCRVMELLSLREHHARTLLIHYRWDVEKMIAILVDRDKDY 391
            KTPS KVITKESLLAAQ+ED+ RVM+LLSLRE+HARTLLIHYRWDVEK+ A+LV++ K++
Sbjct: 34   KTPSTKVITKESLLAAQKEDMRRVMDLLSLREYHARTLLIHYRWDVEKLFAVLVEKGKNH 93

Query: 392  LFSQAGVMLPESRDVNSPVSSSTVMCIVCMEDVPYIQVTKMDCGHSFCNDCWTEHFIVQI 571
            LF+ AGV + E+R   S  +SS VMC +CME+V     T++DCGH FCN+CWTEHFIV+I
Sbjct: 94   LFATAGVTMIENRSNTSSEASSMVMCDICMEEVHGNDATRVDCGHCFCNNCWTEHFIVKI 153

Query: 572  NEGKSKRIKCMADKCSSICDEAVIRQLVSKRHPGLAEKFERFLLESYIEDNKMVKWCPSV 751
            NEG+S+RI+CMA KC++ICDEAV+R LVSKRHP LA KF+RFLLESYIEDNK VKWCPS 
Sbjct: 154  NEGQSRRIRCMAHKCNAICDEAVVRTLVSKRHPDLANKFDRFLLESYIEDNKRVKWCPST 213

Query: 752  PHCGNAIRAXXXXXXXXXXXXGLQFCFSCLSEAHSPCSCRMWELWTKKCQTESETVTWIS 931
            PHCGNAIR             GLQFCFSCLSEAHSPCSC MWELW KKC+ ESETV WI+
Sbjct: 214  PHCGNAIRVEDDEFCEVECSCGLQFCFSCLSEAHSPCSCLMWELWIKKCRDESETVNWIT 273

Query: 932  DHTKACPKCLKPVEKSGGCNLVVCICGQAFCWLCGGPTGRDHTWNSIAGHSCGRFKEESS 1111
             HTK CPKC KPVEK+GGCNLV CICGQAFCWLCGG TGR+HTW+SI+GHSCGR+KEES 
Sbjct: 274  VHTKPCPKCHKPVEKNGGCNLVSCICGQAFCWLCGGATGREHTWSSISGHSCGRYKEESE 333

Query: 1112 KNSISAKRDLYRYMHYLKRYKAH 1180
            + +  AKRDLYRYMHY  RYKAH
Sbjct: 334  QKAERAKRDLYRYMHYHNRYKAH 356


>ref|XP_002284665.1| PREDICTED: probable E3 ubiquitin-protein ligase ARI1 isoform 1 [Vitis
            vinifera] gi|297741410|emb|CBI32541.3| unnamed protein
            product [Vitis vinifera]
          Length = 589

 Score =  511 bits (1315), Expect = e-142
 Identities = 232/323 (71%), Positives = 267/323 (82%)
 Frame = +2

Query: 212  KTPSMKVITKESLLAAQREDLCRVMELLSLREHHARTLLIHYRWDVEKMIAILVDRDKDY 391
            K PS +VITKESLL AQR+DL RVM+LLSLREHHARTLLIH+RWDVEK+ A++V++ K  
Sbjct: 35   KAPSSQVITKESLLTAQRDDLRRVMDLLSLREHHARTLLIHHRWDVEKLFAVMVEKGKPC 94

Query: 392  LFSQAGVMLPESRDVNSPVSSSTVMCIVCMEDVPYIQVTKMDCGHSFCNDCWTEHFIVQI 571
            LF++AGV L E + V  P+SSST+MC +CME V     TKMDCGH FCN+CWTEHF+V+I
Sbjct: 95   LFAEAGVPLMEHQIVPLPLSSSTLMCDICMEAVCSKDSTKMDCGHCFCNNCWTEHFVVRI 154

Query: 572  NEGKSKRIKCMADKCSSICDEAVIRQLVSKRHPGLAEKFERFLLESYIEDNKMVKWCPSV 751
            NEG+S+RI+CMA KC++ICDEA++R LV +RHP LAEKF+RFLLESYIEDNKMVKWCPS 
Sbjct: 155  NEGQSRRIRCMAYKCNAICDEAIVRNLVGRRHPDLAEKFDRFLLESYIEDNKMVKWCPSA 214

Query: 752  PHCGNAIRAXXXXXXXXXXXXGLQFCFSCLSEAHSPCSCRMWELWTKKCQTESETVTWIS 931
            PHCGNAIR             GLQFCFSCLSEAHSPCSC MWE WTKKC+ ESETV WI+
Sbjct: 215  PHCGNAIRVEDDEFCEVECSCGLQFCFSCLSEAHSPCSCLMWEFWTKKCRDESETVNWIT 274

Query: 932  DHTKACPKCLKPVEKSGGCNLVVCICGQAFCWLCGGPTGRDHTWNSIAGHSCGRFKEESS 1111
             HTK CPKC KPVEK+GGCNLV CICGQAFCWLCGG TGRDHTW+SI+GHSCGR+KE+  
Sbjct: 275  VHTKPCPKCHKPVEKNGGCNLVSCICGQAFCWLCGGATGRDHTWSSISGHSCGRYKEDRE 334

Query: 1112 KNSISAKRDLYRYMHYLKRYKAH 1180
            K +  AKRDLYRYMHY  RYKAH
Sbjct: 335  KKAERAKRDLYRYMHYHNRYKAH 357


>ref|XP_002313070.1| predicted protein [Populus trichocarpa] gi|222849478|gb|EEE87025.1|
            predicted protein [Populus trichocarpa]
          Length = 591

 Score =  499 bits (1285), Expect = e-139
 Identities = 225/324 (69%), Positives = 265/324 (81%), Gaps = 1/324 (0%)
 Frame = +2

Query: 212  KTPSMKVITKESLLAAQREDLCRVMELLSLREHHARTLLIHYRWDVEKMIAILVDRDKDY 391
            K  + KVITKESLLAAQREDL RVM+LLSL+EHHARTLLIHYRWDVEK++A+LV++ K  
Sbjct: 41   KGSTTKVITKESLLAAQREDLRRVMDLLSLKEHHARTLLIHYRWDVEKLLAVLVEKGKSC 100

Query: 392  LFSQAGVMLPESRDVN-SPVSSSTVMCIVCMEDVPYIQVTKMDCGHSFCNDCWTEHFIVQ 568
            LF++AGV + E+ D    P SSST+ C +C+ED      T+M+CGH FCN+CWTEHFI++
Sbjct: 101  LFTEAGVTVVENVDDEVPPSSSSTITCDICIEDATADNATRMECGHCFCNNCWTEHFIIK 160

Query: 569  INEGKSKRIKCMADKCSSICDEAVIRQLVSKRHPGLAEKFERFLLESYIEDNKMVKWCPS 748
            INEG+S+RI+CMA +CS+ICDEA++R LVS+RHP LAEKF+RFLLESYIEDNKMVKWCPS
Sbjct: 161  INEGQSRRIQCMAHRCSAICDEAIVRNLVSRRHPNLAEKFDRFLLESYIEDNKMVKWCPS 220

Query: 749  VPHCGNAIRAXXXXXXXXXXXXGLQFCFSCLSEAHSPCSCRMWELWTKKCQTESETVTWI 928
            +PHCG AIR             GLQFCFSCLSEAHSPCSC MWE W+KKC  ESETV WI
Sbjct: 221  IPHCGKAIRVEEDEFCEVECSCGLQFCFSCLSEAHSPCSCLMWERWSKKCHDESETVNWI 280

Query: 929  SDHTKACPKCLKPVEKSGGCNLVVCICGQAFCWLCGGPTGRDHTWNSIAGHSCGRFKEES 1108
            + HTK CPKC KPVEK+GGCNLV CICGQ+FCW+CGG TGRDHTW+ IAGHSCGR+KE+ 
Sbjct: 281  TVHTKPCPKCYKPVEKNGGCNLVSCICGQSFCWVCGGATGRDHTWSRIAGHSCGRYKEDR 340

Query: 1109 SKNSISAKRDLYRYMHYLKRYKAH 1180
             K +  AKRDLYRYMHY  R+KAH
Sbjct: 341  EKQTERAKRDLYRYMHYHNRFKAH 364


>ref|XP_002886198.1| hypothetical protein ARALYDRAFT_480784 [Arabidopsis lyrata subsp.
            lyrata] gi|297332038|gb|EFH62457.1| hypothetical protein
            ARALYDRAFT_480784 [Arabidopsis lyrata subsp. lyrata]
          Length = 598

 Score =  487 bits (1254), Expect = e-135
 Identities = 226/324 (69%), Positives = 260/324 (80%), Gaps = 1/324 (0%)
 Frame = +2

Query: 212  KTPSMKVITKESLLAAQREDLCRVMELLSLREHHARTLLIHYRWDVEKMIAILVDRDKDY 391
            +T ++KVITKESLLAAQREDL RVMELLS++EHHARTLLIHYRWDVEK+ A+LV++ KD 
Sbjct: 37   RTNTVKVITKESLLAAQREDLRRVMELLSVKEHHARTLLIHYRWDVEKLFAVLVEKGKDS 96

Query: 392  LFSQAGVMLPESRDVNSPVS-SSTVMCIVCMEDVPYIQVTKMDCGHSFCNDCWTEHFIVQ 568
            LFS AG+ + E++  ++ VS SS V C +C+EDVP  Q+T+MDCGHSFCN CW  HF V+
Sbjct: 97   LFSGAGLKVLENQPCDASVSRSSIVSCDICIEDVPGYQMTRMDCGHSFCNTCWAGHFTVK 156

Query: 569  INEGKSKRIKCMADKCSSICDEAVIRQLVSKRHPGLAEKFERFLLESYIEDNKMVKWCPS 748
            INEG+SKRI CMA KC++ICDE V+R LVSK  P LAEKF+RFLLESYIEDNKMVKWCPS
Sbjct: 157  INEGQSKRIICMAHKCNAICDEDVVRTLVSKSQPDLAEKFDRFLLESYIEDNKMVKWCPS 216

Query: 749  VPHCGNAIRAXXXXXXXXXXXXGLQFCFSCLSEAHSPCSCRMWELWTKKCQTESETVTWI 928
             PHCGNAIR             GLQFCFSC S+AHSPCSC MWELW KKC  ESETV WI
Sbjct: 217  TPHCGNAIRVEDDELCEVECSCGLQFCFSCSSQAHSPCSCVMWELWRKKCYDESETVNWI 276

Query: 929  SDHTKACPKCLKPVEKSGGCNLVVCICGQAFCWLCGGPTGRDHTWNSIAGHSCGRFKEES 1108
            + HTK CPKC KPVEK+GGCNLV C+C Q+FCWLCGG TGRDHTW+ I+GHSCGRF+E+ 
Sbjct: 277  TVHTKPCPKCNKPVEKNGGCNLVTCLCRQSFCWLCGGATGRDHTWSRISGHSCGRFQEDK 336

Query: 1109 SKNSISAKRDLYRYMHYLKRYKAH 1180
             K    AKRDL RYMHY  RYKAH
Sbjct: 337  EKQMERAKRDLERYMHYHNRYKAH 360


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