BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022864
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518871.1| conserved hypothetical protein [Ricinus comm...    81   8e-14
ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatu...    74   2e-11
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    72   6e-11
gb|ABN07957.1| Polynucleotidyl transferase, Ribonuclease H fold ...    70   2e-10
ref|XP_003599995.1| hypothetical protein MTR_3g050230 [Medicago ...    69   3e-10

>ref|XP_002518871.1| conserved hypothetical protein [Ricinus communis]
           gi|223541858|gb|EEF43404.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 668

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 49/141 (34%), Positives = 68/141 (48%), Gaps = 2/141 (1%)
 Frame = +3

Query: 27  AMLCWSIWKSRNDLVWNQXXXXXXXXXXXXXXXLSQWKFAQ--DKTFDPFLGHMTSADGD 200
           A++C S+W  RN  VWN+               L Q   AQ  D+   P LGH T  D  
Sbjct: 528 ALVCGSLWNQRNHWVWNKQSNTTYGVISPANQLLEQRTRAQSADEEIAPPLGHNT--DVT 585

Query: 201 EQWTVPSGNMIKVNCDAAIFEATNCYSFAFAARDHRGEIIEARSKCKLGNITPDIAEAMG 380
            +WT P    +K+N D A+F            RD  G +I ARS+ ++G  T   AEA+ 
Sbjct: 586 RKWTKPELGWLKINTDTALFLKQGRIGLGCVVRDSNGRMIMARSERRVGRFTAREAEALS 645

Query: 381 VREALSWLKDQQVRDALVETD 443
           ++EALS++KD Q+     E D
Sbjct: 646 MKEALSYMKDYQMDKCFFELD 666


>ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
           gi|355487250|gb|AES68453.1| 60S ribosomal protein L23
           [Medicago truncatula]
          Length = 547

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 41/138 (29%), Positives = 61/138 (44%)
 Frame = +3

Query: 30  MLCWSIWKSRNDLVWNQXXXXXXXXXXXXXXXLSQWKFAQDKTFDPFLGHMTSADGDEQW 209
           M+ W IW+ RND VW+                L QW+ A++           S      W
Sbjct: 1   MMLWCIWRRRNDKVWDGQLQPSNIAVQLARELLFQWQAARNSATTQV---QQSPQDTIAW 57

Query: 210 TVPSGNMIKVNCDAAIFEATNCYSFAFAARDHRGEIIEARSKCKLGNITPDIAEAMGVRE 389
             P+   +K N DAAIF   N +      RD RG  ++A +    G   P  AEA+G+R+
Sbjct: 58  QPPAAGFLKCNVDAAIFSEQNRFGTGMCVRDQRGRFLKAATNWYEGCPPPQEAEAVGLRD 117

Query: 390 ALSWLKDQQVRDALVETD 443
           A+ WL   ++ +  +E D
Sbjct: 118 AILWLGQLELSNVQLELD 135


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
            At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 41/137 (29%), Positives = 58/137 (42%)
 Frame = +3

Query: 33   LCWSIWKSRNDLVWNQXXXXXXXXXXXXXXXLSQWKFAQDKTFDPFLGHMTSADGDEQWT 212
            +CW +W  RND+VWN                L  W  A +         +T      +W 
Sbjct: 610  VCWGLWWRRNDVVWNGRIWHSQQVVNGCFTMLESWFHANETLATA----VTVPSYSSKWQ 665

Query: 213  VPSGNMIKVNCDAAIFEATNCYSFAFAARDHRGEIIEARSKCKLGNITPDIAEAMGVREA 392
             P    IK+N D A+F         F  RDH+G  +   +K       P + EA+GVRE 
Sbjct: 666  KPDYGWIKINVDGAVFPDKGAIGAVF--RDHQGRFMGGFAKPFPHQTLPKVVEALGVREV 723

Query: 393  LSWLKDQQVRDALVETD 443
            LSW+ ++     +VETD
Sbjct: 724  LSWIHERSRSRIVVETD 740


>gb|ABN07957.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 380

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 2/149 (1%)
 Frame = +3

Query: 3   DVNLRQTAAMLCWSIWKSRNDLVWNQXXXXXXXXXXXXXXXLSQWKFAQDKTF--DPFLG 176
           D+  +Q  A+  WS+W+ RN+ VWN                L+ WK AQ+      P   
Sbjct: 222 DIAHQQIFAVTLWSLWRHRNNKVWNNIVETTEEIGDRAVAFLNSWKAAQETRIRSSPANP 281

Query: 177 HMTSADGDEQWTVPSGNMIKVNCDAAIFEATNCYSFAFAARDHRGEIIEARSKCKLGNIT 356
           H   +    +W+ PS    K N DAA   + +   F    RD  G  + +R++C    + 
Sbjct: 282 HFDIS----KWSKPSVGRFKCNVDAAFSASLHRVGFGACIRDANGNHVISRTECFTPLLD 337

Query: 357 PDIAEAMGVREALSWLKDQQVRDALVETD 443
            ++ EA+G+  A+ W KD  + +   ETD
Sbjct: 338 VEMGEAIGLLHAMRWAKDLNLVNMDFETD 366


>ref|XP_003599995.1| hypothetical protein MTR_3g050230 [Medicago truncatula]
           gi|355489043|gb|AES70246.1| hypothetical protein
           MTR_3g050230 [Medicago truncatula]
          Length = 240

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 46/158 (29%), Positives = 64/158 (40%), Gaps = 16/158 (10%)
 Frame = +3

Query: 18  QTAAMLCWSIWKSRNDLVWNQXXXXXXXXXXXXXXXLSQWKFA-QDKTFDPFLGHMTSAD 194
           Q  A L WSIWKSRN  VW                 L  W+ A ++K     +G   +  
Sbjct: 24  QMVATLLWSIWKSRNLRVWQNTTDTTQAIVERARFLLYNWQLANKEKQQGAAVGASVAQP 83

Query: 195 GDEQ---------------WTVPSGNMIKVNCDAAIFEATNCYSFAFAARDHRGEIIEAR 329
              Q               W  P    +K N DA  FE  NC  F    RD  GE I+A+
Sbjct: 84  ISVQTAGTTRNAVLPVQNRWQKPLQGRLKCNVDADFFETLNCVGFGLCIRDEFGEFIKAK 143

Query: 330 SKCKLGNITPDIAEAMGVREALSWLKDQQVRDALVETD 443
           +       + DI EA+G+  A+ W+++ Q+ +   E D
Sbjct: 144 TLWSNPICSSDIGEALGLSHAIQWVQELQLPNVDFELD 181