BLASTX nr result

ID: Bupleurum21_contig00022836 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022836
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316810.1| predicted protein [Populus trichocarpa] gi|2...    69   6e-12
gb|ADI60302.1| ER luminal protein receptor 2a [Nicotiana bentham...    68   1e-11
gb|ACD56623.1| ERD2-like protein [Gossypium raimondii]                 68   1e-11
ref|XP_002522261.1| er lumen protein retaining receptor, putativ...    70   1e-11
ref|XP_002267990.1| PREDICTED: ER lumen protein retaining recept...    68   2e-11

>ref|XP_002316810.1| predicted protein [Populus trichocarpa] gi|222859875|gb|EEE97422.1|
           predicted protein [Populus trichocarpa]
          Length = 215

 Score = 68.9 bits (167), Expect(2) = 6e-12
 Identities = 29/34 (85%), Positives = 33/34 (97%)
 Frame = -3

Query: 264 LSCVSGLVQTAMYADFFYYFFISWKNNVKLQLPA 163
           ++CVSGLVQTA+YADFFYY+FISWKNN KLQLPA
Sbjct: 182 IACVSGLVQTALYADFFYYYFISWKNNAKLQLPA 215



 Score = 26.2 bits (56), Expect(2) = 6e-12
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -1

Query: 299 IYRYITEPHFTLYLA 255
           IYRY  +PHFT ++A
Sbjct: 169 IYRYFIDPHFTRWIA 183


>gb|ADI60302.1| ER luminal protein receptor 2a [Nicotiana benthamiana]
          Length = 215

 Score = 68.2 bits (165), Expect(2) = 1e-11
 Identities = 29/34 (85%), Positives = 32/34 (94%)
 Frame = -3

Query: 264 LSCVSGLVQTAMYADFFYYFFISWKNNVKLQLPA 163
           +SC SGLVQTA+YADFFYY+FISWKNN KLQLPA
Sbjct: 182 ISCFSGLVQTALYADFFYYYFISWKNNAKLQLPA 215



 Score = 26.2 bits (56), Expect(2) = 1e-11
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = -1

Query: 299 IYRYITEPHFTLYLA 255
           IYRY+TEP FT +++
Sbjct: 169 IYRYLTEPRFTRWIS 183


>gb|ACD56623.1| ERD2-like protein [Gossypium raimondii]
          Length = 215

 Score = 67.8 bits (164), Expect(2) = 1e-11
 Identities = 27/34 (79%), Positives = 33/34 (97%)
 Frame = -3

Query: 264 LSCVSGLVQTAMYADFFYYFFISWKNNVKLQLPA 163
           ++CVSG+VQTA+YADFFYY+F+SWKNN KLQLPA
Sbjct: 182 IACVSGIVQTALYADFFYYYFVSWKNNAKLQLPA 215



 Score = 26.6 bits (57), Expect(2) = 1e-11
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -1

Query: 299 IYRYITEPHFTLYLA 255
           IYRY TE HFT ++A
Sbjct: 169 IYRYFTEQHFTRWIA 183


>ref|XP_002522261.1| er lumen protein retaining receptor, putative [Ricinus communis]
           gi|223538514|gb|EEF40119.1| er lumen protein retaining
           receptor, putative [Ricinus communis]
          Length = 215

 Score = 69.7 bits (169), Expect(2) = 1e-11
 Identities = 29/34 (85%), Positives = 33/34 (97%)
 Frame = -3

Query: 264 LSCVSGLVQTAMYADFFYYFFISWKNNVKLQLPA 163
           +SC+SGLVQTA+YADFFYY+FISWKNN KLQLPA
Sbjct: 182 ISCISGLVQTALYADFFYYYFISWKNNAKLQLPA 215



 Score = 24.3 bits (51), Expect(2) = 1e-11
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -1

Query: 299 IYRYITEPHFTLYLASL 249
           IYRY TE HF+ +++ +
Sbjct: 169 IYRYFTETHFSRWISCI 185


>ref|XP_002267990.1| PREDICTED: ER lumen protein retaining receptor [Vitis vinifera]
           gi|297740541|emb|CBI30723.3| unnamed protein product
           [Vitis vinifera]
          Length = 215

 Score = 67.8 bits (164), Expect(2) = 2e-11
 Identities = 28/34 (82%), Positives = 33/34 (97%)
 Frame = -3

Query: 264 LSCVSGLVQTAMYADFFYYFFISWKNNVKLQLPA 163
           ++C+SGLVQTA+YADFFYY+FISWKNN KLQLPA
Sbjct: 182 IACISGLVQTALYADFFYYYFISWKNNSKLQLPA 215



 Score = 25.4 bits (54), Expect(2) = 2e-11
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -1

Query: 299 IYRYITEPHFTLYLASL 249
           IYRY TE HF+ ++A +
Sbjct: 169 IYRYFTEQHFSRWIACI 185


Top