BLASTX nr result

ID: Bupleurum21_contig00022825 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022825
         (857 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEA11207.1| ubiquitin-protein ligase-like protein [Solanum ly...    82   1e-13
ref|XP_002271873.1| PREDICTED: E3 ubiquitin-protein ligase HOS1-...    76   1e-11
ref|XP_002264751.2| PREDICTED: E3 ubiquitin-protein ligase HOS1-...    74   3e-11
emb|CBI29495.3| unnamed protein product [Vitis vinifera]               74   3e-11
gb|ACY92092.1| HOS1 [Citrus trifoliata]                                60   6e-07

>gb|AEA11207.1| ubiquitin-protein ligase-like protein [Solanum lycopersicum]
          Length = 496

 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 39/86 (45%), Positives = 54/86 (62%)
 Frame = +3

Query: 12  AADHVVSFSGGQGLFRDSAQETYLNASGNHRQPDRPNKTWAGSSGDLMDVSWSHEEKDTS 191
           A ++V S S  +G+ + S +++Y++  G  +  D  +++      D MDVSWSHEEKD S
Sbjct: 386 AGNNVNSLSSNRGILKHSVEDSYMSYPGKRQLSDAADRSRMLPLNDSMDVSWSHEEKDPS 445

Query: 192 IEDASANGGPRWRSDDTSEDDEQHSP 269
                 NGGPRWRSDDTSED+E  SP
Sbjct: 446 TVHLETNGGPRWRSDDTSEDEEIPSP 471


>ref|XP_002271873.1| PREDICTED: E3 ubiquitin-protein ligase HOS1-like [Vitis vinifera]
          Length = 163

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 34/88 (38%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
 Frame = +3

Query: 9   VAADHVVSFSGGQGLFRDSAQETYLNASGNHRQPDRPNKTWAG-SSGDLMDVSWSHEEKD 185
           + A+   +     GLF+D+AQ+   N SG     D P++ W+   S + M+VSWS+++  
Sbjct: 52  ITANPATTPGSEHGLFKDAAQDLNPNISGKRVLSDGPDRPWSVVPSSNAMEVSWSYQDNG 111

Query: 186 TSIEDASANGGPRWRSDDTSEDDEQHSP 269
           +++++ +ANGGPRWRSD+ SE +E+ SP
Sbjct: 112 SAVDEMNANGGPRWRSDEMSEGEEKQSP 139


>ref|XP_002264751.2| PREDICTED: E3 ubiquitin-protein ligase HOS1-like [Vitis vinifera]
          Length = 976

 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 33/88 (37%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
 Frame = +3

Query: 9    VAADHVVSFSGGQGLFRDSAQETYLNASGNHRQPDRPNKTWAG-SSGDLMDVSWSHEEKD 185
            + A+   +     GLF+D+AQ+   N SG     D P++ W+   S + M+VSWS+++  
Sbjct: 865  ITANPATTPGSEHGLFKDAAQDLNPNISGKRVLSDGPDRPWSVVPSSNAMEVSWSYQDNG 924

Query: 186  TSIEDASANGGPRWRSDDTSEDDEQHSP 269
            +++++ + NGGPRWRSD+ SE +E+ SP
Sbjct: 925  SAVDEMNVNGGPRWRSDEMSEGEEKQSP 952


>emb|CBI29495.3| unnamed protein product [Vitis vinifera]
          Length = 817

 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 33/88 (37%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
 Frame = +3

Query: 9   VAADHVVSFSGGQGLFRDSAQETYLNASGNHRQPDRPNKTWAG-SSGDLMDVSWSHEEKD 185
           + A+   +     GLF+D+AQ+   N SG     D P++ W+   S + M+VSWS+++  
Sbjct: 706 ITANPATTPGSEHGLFKDAAQDLNPNISGKRVLSDGPDRPWSVVPSSNAMEVSWSYQDNG 765

Query: 186 TSIEDASANGGPRWRSDDTSEDDEQHSP 269
           +++++ + NGGPRWRSD+ SE +E+ SP
Sbjct: 766 SAVDEMNVNGGPRWRSDEMSEGEEKQSP 793


>gb|ACY92092.1| HOS1 [Citrus trifoliata]
          Length = 973

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
 Frame = +3

Query: 45   QGLFRDSAQETYLNASGNHRQPDRPNKTWAG-SSGDLMDVSWSHEEKDTSIED--ASANG 215
            +G+  D A +   N S      DR +  W   SS D MDVSWS+ +   ++ED  A+A G
Sbjct: 872  RGVHNDLAGDLRSNLSSKRVHSDREDGPWYMISSEDPMDVSWSNGKNGLAVEDRQANAGG 931

Query: 216  GPRWRSDDTSEDDEQHSP 269
            G RWRSD+TS+++E+ SP
Sbjct: 932  GLRWRSDETSDEEEEQSP 949


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