BLASTX nr result

ID: Bupleurum21_contig00022783 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022783
         (709 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG37663.1| CCHC-type integrase [Populus trichocarpa]              268   1e-69
ref|XP_002334088.1| predicted protein [Populus trichocarpa] gi|2...   259   4e-67
ref|XP_002334494.1| predicted protein [Populus trichocarpa] gi|2...   255   5e-66
ref|XP_002513434.1| ATP binding protein, putative [Ricinus commu...   242   5e-62
ref|XP_002299255.1| predicted protein [Populus trichocarpa] gi|2...   232   5e-59

>gb|ABG37663.1| CCHC-type integrase [Populus trichocarpa]
          Length = 2037

 Score =  268 bits (684), Expect = 1e-69
 Identities = 130/239 (54%), Positives = 168/239 (70%), Gaps = 5/239 (2%)
 Frame = -3

Query: 707 FSKGRFQLQFLD-GNLVLNTRDIVTNNAYDPYYQIFDK---NKSNQDYHVKFSATGYISI 540
           FS GRFQL+ LD GNLVLN  ++ T   YD YY        N SN  Y + F+ +GY+ I
Sbjct: 212 FSLGRFQLRLLDNGNLVLNYMNLPTKFVYDDYYSSETSDASNSSNSGYRLIFNESGYMYI 271

Query: 539 IGRDGAVVNLTTDKAVPTTGYYHRATLNYDGVLVQYYHPKDFSGTPNWKAVWEIPENICV 360
           + R+G + +LT   A+PT  +YHRATLN+DGV  QY++PK  SG  +W +VW  P++ICV
Sbjct: 272 LRRNGLIEDLTKT-ALPTIDFYHRATLNFDGVFTQYFYPKASSGNRSWSSVWSKPDDICV 330

Query: 359 DIQGVGGSGPCGQNSVCRLNDSRRVHCECPDSYSLLDPNDKHGSCKPNFTQSCDDNG-SS 183
           ++    GSG CG NS+C L   +R  C+CP  +SLLD NDK+GSC P+F  SC D+G +S
Sbjct: 331 NMGADLGSGACGYNSICNLKADKRPECKCPQGFSLLDQNDKYGSCIPDFELSCRDDGLNS 390

Query: 182 SEDLYDFVEIANTDWPTSDYEQLKPISELDCKKQCLNDCYCAVAIYRGDSCWKKKLPLS 6
           +ED YDFVE+ N DWPTSDYE+ KPI+E +C+K CLNDC C+VAI+R D CWKKKLPLS
Sbjct: 391 TEDQYDFVELINVDWPTSDYERYKPINEDECRKSCLNDCLCSVAIFR-DGCWKKKLPLS 448


>ref|XP_002334088.1| predicted protein [Populus trichocarpa] gi|222839594|gb|EEE77931.1|
           predicted protein [Populus trichocarpa]
          Length = 799

 Score =  259 bits (662), Expect = 4e-67
 Identities = 126/240 (52%), Positives = 161/240 (67%), Gaps = 6/240 (2%)
 Frame = -3

Query: 707 FSKGRFQLQFLD-GNLVLNTRDIVTNNAYDPYYQIFDK---NKSNQDYHVKFSATGYISI 540
           FS GRFQL+  D GNLVL T ++ ++   +PYY+       + S+  Y V F+ +GY+ I
Sbjct: 174 FSMGRFQLKLRDDGNLVLATINLPSDYTNEPYYKSGTDGGLDSSSPGYQVVFNESGYLYI 233

Query: 539 IGRDGAVVNLTTDKAVPTTGYYHRATLNYDGVLVQYYHPKDFSGTPNWKAVWEIPENICV 360
           + ++  + +LT      T  +YHRATLN+DGV  QYYHPK  +G   W  +W  P+NIC 
Sbjct: 234 LRKNDQIFSLTQRVTASTGDFYHRATLNFDGVFTQYYHPKASTGNERWTPIWSQPDNICQ 293

Query: 359 DIQGVGGSGPCGQNSVCRLNDSRRVHCECPDSYSLLDPNDKHGSCKPNFTQSC-DDNGSS 183
                 GSG CG NSVCRLN   R  CECP  YSLLDP+D++GSC+PN+TQSC +D  + 
Sbjct: 294 ASSVSAGSGTCGFNSVCRLNSDGRPICECPGGYSLLDPSDQYGSCRPNYTQSCEEDEVAP 353

Query: 182 SEDLYDFVEIANTDWPTSDYEQLKPISELDCKKQCLNDCYCAVAIYR-GDSCWKKKLPLS 6
            EDLYDF E+ NTDWPTSDY  L+P +E  C++ CLNDC CAVAI+R GD CWKKKLPLS
Sbjct: 354 VEDLYDFEELTNTDWPTSDYALLQPFTEEKCRQSCLNDCMCAVAIFRSGDMCWKKKLPLS 413


>ref|XP_002334494.1| predicted protein [Populus trichocarpa] gi|222872794|gb|EEF09925.1|
           predicted protein [Populus trichocarpa]
          Length = 801

 Score =  255 bits (652), Expect = 5e-66
 Identities = 125/240 (52%), Positives = 159/240 (66%), Gaps = 6/240 (2%)
 Frame = -3

Query: 707 FSKGRFQLQFLD-GNLVLNTRDIVTNNAYDPYYQIFDK---NKSNQDYHVKFSATGYISI 540
           FS GRFQL+  D GNL L T ++ ++   +PYY+       + S+  Y V F+ +GY+ I
Sbjct: 174 FSMGRFQLKLTDDGNLELATINLPSDYTNEPYYKSGTDGGLDSSSPGYQVVFNESGYLYI 233

Query: 539 IGRDGAVVNLTTDKAVPTTGYYHRATLNYDGVLVQYYHPKDFSGTPNWKAVWEIPENICV 360
           +  +  + +LT      T  +Y RATLN+DG+  QYYHPK  +G   W  +W  P+NIC 
Sbjct: 234 LRENDQIFSLTQRVTASTGDFYRRATLNFDGLFTQYYHPKASTGNERWTPIWSQPDNICQ 293

Query: 359 DIQGVGGSGPCGQNSVCRLNDSRRVHCECPDSYSLLDPNDKHGSCKPNFTQSC-DDNGSS 183
                 GSG CG NSVCRLN  RR  CECP  YSLLDP+D++GSC+PN+TQSC +D  + 
Sbjct: 294 ASFVSSGSGTCGFNSVCRLNSDRRPICECPGGYSLLDPSDQYGSCRPNYTQSCEEDEVAP 353

Query: 182 SEDLYDFVEIANTDWPTSDYEQLKPISELDCKKQCLNDCYCAVAIYR-GDSCWKKKLPLS 6
            EDLYDF E+ NTDWPTSDY  LKP +E  C++ CLNDC CAVAI+R GD CWKKKLPLS
Sbjct: 354 VEDLYDFEELTNTDWPTSDYALLKPFTEEKCRQSCLNDCMCAVAIFRSGDMCWKKKLPLS 413


>ref|XP_002513434.1| ATP binding protein, putative [Ricinus communis]
           gi|223547342|gb|EEF48837.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 800

 Score =  242 bits (618), Expect = 5e-62
 Identities = 116/238 (48%), Positives = 156/238 (65%), Gaps = 4/238 (1%)
 Frame = -3

Query: 707 FSKGRFQLQFL-DGNLVLNTRDIVTNNAYDPYY--QIFDKNKSNQDYHVKFSATGYISII 537
           FS+GRFQ + + DGN VLN  ++ T +AYD YY     D N SN    + F+ +GY+  +
Sbjct: 176 FSRGRFQFRLIPDGNGVLNANNLRTGDAYDAYYWTNTVDANLSNAGLRIVFNESGYLYTL 235

Query: 536 GRDGAVVNLTTDKAVPTTGYYHRATLNYDGVLVQYYHPKDFSGTPNWKAVWEIPENICVD 357
                   +T ++ VPTT YYHR TLN+DGVL QY HPK+ +   NW  ++  PENIC  
Sbjct: 236 RASNKRELITPERVVPTTEYYHRVTLNFDGVLTQYSHPKNSTDNGNWSIIFSAPENICFL 295

Query: 356 IQGVGGSGPCGQNSVCRLNDSRRVHCECPDSYSLLDPNDKHGSCKPNF-TQSCDDNGSSS 180
           I  + G+GPCG NSVC+LN  +R  C CP  +S +DP D +  CKP+F TQ C+D  S+S
Sbjct: 296 ITDI-GTGPCGFNSVCQLNADQRAICRCPPRFSSVDPGDDYAGCKPDFSTQFCEDAPSTS 354

Query: 179 EDLYDFVEIANTDWPTSDYEQLKPISELDCKKQCLNDCYCAVAIYRGDSCWKKKLPLS 6
            + YDF+E+ NTDWPTSDYE+    +  +C+K C+ DC+C V ++RG SCWKKKLPLS
Sbjct: 355 PEDYDFLELTNTDWPTSDYERYDSYNIEECQKACIQDCFCNVVVFRG-SCWKKKLPLS 411


>ref|XP_002299255.1| predicted protein [Populus trichocarpa] gi|222846513|gb|EEE84060.1|
           predicted protein [Populus trichocarpa]
          Length = 775

 Score =  232 bits (592), Expect = 5e-59
 Identities = 109/238 (45%), Positives = 150/238 (63%), Gaps = 4/238 (1%)
 Frame = -3

Query: 707 FSKGRFQLQFL-DGNLVLNTRDIVTNNAYDPYY--QIFDKNKSNQDYHVKFSATGYISII 537
           FS+GRFQ + + DGN VLNT ++ T   Y+ Y+  +  D N SN  Y V F+ +GY+ ++
Sbjct: 174 FSQGRFQFRLIPDGNAVLNTINLPTGFPYEAYFWSKTVDSNSSNAGYQVVFNESGYLYVL 233

Query: 536 GRDGAVVNLTTDKAVPTTGYYHRATLNYDGVLVQYYHPKDFSGTPNWKAVWEIPENICVD 357
             +     LT  + VP T  YHRATL++DGV V Y HPK+  G  NW  V  +PENIC  
Sbjct: 234 RANNTREALTLGRVVPATENYHRATLHFDGVFVLYSHPKNSPGNENWSVVRTMPENICTV 293

Query: 356 IQGVGGSGPCGQNSVCRLNDSRRVHCECPDSYSLLDPNDKHGSCKPNF-TQSCDDNGSSS 180
           ++G+ GSGPCG N VC ++  +R  C CP  +SLLDP+D +G CKP+F TQ C +   ++
Sbjct: 294 VRGLKGSGPCGYNGVCTISTDKRAICRCPQRFSLLDPDDPYGGCKPDFPTQVCAEEVPNA 353

Query: 179 EDLYDFVEIANTDWPTSDYEQLKPISELDCKKQCLNDCYCAVAIYRGDSCWKKKLPLS 6
            + Y+ V + N DWP SDYE   P +  DCKK CL D +C V ++   +CWKK+LPLS
Sbjct: 354 PEDYELVPLTNIDWPESDYEMYTPYNIEDCKKACLQDFFCNVIVFGEGTCWKKRLPLS 411


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