BLASTX nr result

ID: Bupleurum21_contig00022771 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022771
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29694.3| unnamed protein product [Vitis vinifera]               60   3e-12
ref|XP_003633401.1| PREDICTED: uncharacterized protein LOC100852...    60   3e-12
emb|CAN60293.1| hypothetical protein VITISV_023400 [Vitis vinifera]    60   3e-12
ref|XP_002526435.1| conserved hypothetical protein [Ricinus comm...    55   1e-10
ref|XP_002331096.1| predicted protein [Populus trichocarpa] gi|2...    47   2e-08

>emb|CBI29694.3| unnamed protein product [Vitis vinifera]
          Length = 519

 Score = 60.1 bits (144), Expect(2) = 3e-12
 Identities = 30/52 (57%), Positives = 36/52 (69%)
 Frame = -1

Query: 285 NGDNTVTAEKQEKHTRNKGRPDRGVWTALRRSDGSNTSIMSLPPANPQRTQS 130
           N  ++  +EKQ+K TRNK RPDRGVWT LRRSDGS+ S  SL  +  Q T S
Sbjct: 377 NDVHSFVSEKQDKRTRNKDRPDRGVWTPLRRSDGSHASDESLSSSASQPTSS 428



 Score = 36.2 bits (82), Expect(2) = 3e-12
 Identities = 18/38 (47%), Positives = 28/38 (73%), Gaps = 3/38 (7%)
 Frame = -3

Query: 112 GVQGDPKKDMLSSKSGELKQVGS--GWHTS-DNGSYKH 8
           G  G+ + DM +++SGE+K +GS  G H++ DNGS+KH
Sbjct: 433 GSHGEMRSDMSNARSGEVKALGSGRGGHSALDNGSHKH 470


>ref|XP_003633401.1| PREDICTED: uncharacterized protein LOC100852735 [Vitis vinifera]
          Length = 322

 Score = 60.1 bits (144), Expect(2) = 3e-12
 Identities = 30/52 (57%), Positives = 36/52 (69%)
 Frame = -1

Query: 285 NGDNTVTAEKQEKHTRNKGRPDRGVWTALRRSDGSNTSIMSLPPANPQRTQS 130
           N  ++  +EKQ+K TRNK RPDRGVWT LRRSDGS+ S  SL  +  Q T S
Sbjct: 166 NDVHSFVSEKQDKRTRNKDRPDRGVWTPLRRSDGSHASDESLSSSASQPTSS 217



 Score = 36.2 bits (82), Expect(2) = 3e-12
 Identities = 18/38 (47%), Positives = 28/38 (73%), Gaps = 3/38 (7%)
 Frame = -3

Query: 112 GVQGDPKKDMLSSKSGELKQVGS--GWHTS-DNGSYKH 8
           G  G+ + DM +++SGE+K +GS  G H++ DNGS+KH
Sbjct: 222 GSHGEMRSDMSNARSGEVKALGSGRGGHSALDNGSHKH 259


>emb|CAN60293.1| hypothetical protein VITISV_023400 [Vitis vinifera]
          Length = 304

 Score = 60.1 bits (144), Expect(2) = 3e-12
 Identities = 30/52 (57%), Positives = 36/52 (69%)
 Frame = -1

Query: 285 NGDNTVTAEKQEKHTRNKGRPDRGVWTALRRSDGSNTSIMSLPPANPQRTQS 130
           N  ++  +EKQ+K TRNK RPDRGVWT LRRSDGS+ S  SL  +  Q T S
Sbjct: 122 NDVHSFVSEKQDKRTRNKDRPDRGVWTPLRRSDGSHASDESLSSSASQPTSS 173



 Score = 36.2 bits (82), Expect(2) = 3e-12
 Identities = 18/38 (47%), Positives = 28/38 (73%), Gaps = 3/38 (7%)
 Frame = -3

Query: 112 GVQGDPKKDMLSSKSGELKQVGS--GWHTS-DNGSYKH 8
           G  G+ + DM +++SGE+K +GS  G H++ DNGS+KH
Sbjct: 178 GSHGEMRSDMSNARSGEVKALGSGRGGHSALDNGSHKH 215


>ref|XP_002526435.1| conserved hypothetical protein [Ricinus communis]
           gi|223534215|gb|EEF35930.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 472

 Score = 54.7 bits (130), Expect(2) = 1e-10
 Identities = 28/46 (60%), Positives = 31/46 (67%)
 Frame = -1

Query: 267 TAEKQEKHTRNKGRPDRGVWTALRRSDGSNTSIMSLPPANPQRTQS 130
           + EKQEK TRNK RPDR VWT LRRSDGS  S  SL  +  Q T +
Sbjct: 335 SGEKQEKRTRNKDRPDRVVWTPLRRSDGSYASDESLSSSASQSTHT 380



 Score = 36.2 bits (82), Expect(2) = 1e-10
 Identities = 23/49 (46%), Positives = 34/49 (69%), Gaps = 3/49 (6%)
 Frame = -3

Query: 145 AAYTIFDTSCGGVQGDPKKDMLSSKSGELKQVGSG--WHTS-DNGSYKH 8
           + +T  D+S G + GD K D  +S+SG++K +GSG   H+S DNGS+KH
Sbjct: 377 STHTGQDSSQGNL-GDIKVDSSNSRSGDVKTLGSGRSSHSSLDNGSHKH 424


>ref|XP_002331096.1| predicted protein [Populus trichocarpa] gi|222872824|gb|EEF09955.1|
           predicted protein [Populus trichocarpa]
          Length = 225

 Score = 47.0 bits (110), Expect(2) = 2e-08
 Identities = 27/44 (61%), Positives = 30/44 (68%)
 Frame = -1

Query: 261 EKQEKHTRNKGRPDRGVWTALRRSDGSNTSIMSLPPANPQRTQS 130
           EKQE+ TRNK RPDR VWT LRRS+GS  S  SL  +    TQS
Sbjct: 43  EKQERRTRNKDRPDRVVWT-LRRSEGSYASDESLSSSAYLSTQS 85



 Score = 36.6 bits (83), Expect(2) = 2e-08
 Identities = 20/35 (57%), Positives = 26/35 (74%), Gaps = 3/35 (8%)
 Frame = -3

Query: 103 GDPKKDMLSSKSGELKQVGSGW--HTS-DNGSYKH 8
           GD K D L+ +SGE+K +GSG   H+S DNGS+KH
Sbjct: 95  GDVKADTLNLRSGEVKALGSGRSNHSSLDNGSHKH 129


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