BLASTX nr result

ID: Bupleurum21_contig00022764 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022764
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543628.1| PREDICTED: nucleoporin NUP53-like [Glycine max]    86   3e-15
gb|ACU23058.1| unknown [Glycine max]                                   86   3e-15
ref|NP_001240960.1| uncharacterized protein LOC100783752 [Glycin...    86   3e-15
ref|XP_003597692.1| Nucleoporin NUP53, partial [Medicago truncat...    78   6e-13
ref|XP_003597693.1| Nucleoporin NUP53 [Medicago truncatula] gi|3...    78   6e-13

>ref|XP_003543628.1| PREDICTED: nucleoporin NUP53-like [Glycine max]
          Length = 331

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 51/104 (49%), Positives = 59/104 (56%), Gaps = 1/104 (0%)
 Frame = +1

Query: 1   PVFTLEDRSDSSPESGIQDYPISPEMMSDNRSPFHSLGKDWSTP-KSKSEVSTSYAMMGS 177
           PVFTLEDRSD SPESGI DY ISPE  SD R+P  +  K++STP KSKSE STSYA+ G 
Sbjct: 58  PVFTLEDRSDFSPESGILDYQISPEAKSDTRTPIQTSNKEFSTPLKSKSEASTSYALRGV 117

Query: 178 QLQNRQSPVXXXXXXXXXXXXXXXXXXXXXXXXXXPVDGMVQPG 309
           Q   + SP                           PV+G+VQPG
Sbjct: 118 QQNQQGSP----GLSWWSPTTAKSVGEQDEKGRSSPVEGVVQPG 157


>gb|ACU23058.1| unknown [Glycine max]
          Length = 307

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 51/104 (49%), Positives = 59/104 (56%), Gaps = 1/104 (0%)
 Frame = +1

Query: 1   PVFTLEDRSDSSPESGIQDYPISPEMMSDNRSPFHSLGKDWSTP-KSKSEVSTSYAMMGS 177
           PVFTLEDRSD SPESGI DY ISPE  SD R+P  +  K++STP KSKSE STSYA+ G 
Sbjct: 58  PVFTLEDRSDFSPESGILDYQISPEAKSDTRTPIQTSNKEFSTPLKSKSEASTSYALRGV 117

Query: 178 QLQNRQSPVXXXXXXXXXXXXXXXXXXXXXXXXXXPVDGMVQPG 309
           Q   + SP                           PV+G+VQPG
Sbjct: 118 QQNQQGSP----GLSWWSPTTAKSVGEQDEKGRSSPVEGVVQPG 157


>ref|NP_001240960.1| uncharacterized protein LOC100783752 [Glycine max]
           gi|255639315|gb|ACU19955.1| unknown [Glycine max]
          Length = 331

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 51/104 (49%), Positives = 59/104 (56%), Gaps = 1/104 (0%)
 Frame = +1

Query: 1   PVFTLEDRSDSSPESGIQDYPISPEMMSDNRSPFHSLGKDWSTP-KSKSEVSTSYAMMGS 177
           PVFTLEDRSD SPESGI DY ISPE  SD R+P  +  K++STP KSKSE STSYA+ G 
Sbjct: 58  PVFTLEDRSDFSPESGILDYQISPETKSDTRTPIQTSNKEFSTPVKSKSEASTSYALRGV 117

Query: 178 QLQNRQSPVXXXXXXXXXXXXXXXXXXXXXXXXXXPVDGMVQPG 309
           Q   + SP                           PV+G+VQPG
Sbjct: 118 QQNQQGSP----GLSWWSPTTAKSGGEQDERGRSSPVEGVVQPG 157


>ref|XP_003597692.1| Nucleoporin NUP53, partial [Medicago truncatula]
           gi|355486740|gb|AES67943.1| Nucleoporin NUP53, partial
           [Medicago truncatula]
          Length = 263

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 47/104 (45%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
 Frame = +1

Query: 1   PVFTLEDRSDSSPESGIQDYPISPEMMSDNRSPFHSLGKDWSTP-KSKSEVSTSYAMMGS 177
           P FTLEDRSD SPESGI DY +SPE  SD+++P  +  +++STP K KSE STSYA+ G 
Sbjct: 58  PFFTLEDRSDFSPESGILDYQMSPETKSDHKTPIQTPNREFSTPAKGKSEASTSYALRGV 117

Query: 178 QLQNRQSPVXXXXXXXXXXXXXXXXXXXXXXXXXXPVDGMVQPG 309
           Q QN+Q  +                          PV+G+VQPG
Sbjct: 118 Q-QNQQGSL----SLNWWSSPAKSGGEQEEKGRGSPVEGVVQPG 156


>ref|XP_003597693.1| Nucleoporin NUP53 [Medicago truncatula] gi|355486741|gb|AES67944.1|
           Nucleoporin NUP53 [Medicago truncatula]
          Length = 330

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 47/104 (45%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
 Frame = +1

Query: 1   PVFTLEDRSDSSPESGIQDYPISPEMMSDNRSPFHSLGKDWSTP-KSKSEVSTSYAMMGS 177
           P FTLEDRSD SPESGI DY +SPE  SD+++P  +  +++STP K KSE STSYA+ G 
Sbjct: 58  PFFTLEDRSDFSPESGILDYQMSPETKSDHKTPIQTPNREFSTPAKGKSEASTSYALRGV 117

Query: 178 QLQNRQSPVXXXXXXXXXXXXXXXXXXXXXXXXXXPVDGMVQPG 309
           Q QN+Q  +                          PV+G+VQPG
Sbjct: 118 Q-QNQQGSL----SLNWWSSPAKSGGEQEEKGRGSPVEGVVQPG 156


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