BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022755
         (796 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...   253   3e-65
ref|XP_002308049.1| predicted protein [Populus trichocarpa] gi|2...   248   8e-64
emb|CBI29879.3| unnamed protein product [Vitis vinifera]              220   3e-55
ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub...   220   3e-55
ref|XP_003537204.1| PREDICTED: DNA-directed RNA polymerase I sub...   208   1e-51

>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
           communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
           polymerase I largest subunit, putative [Ricinus
           communis]
          Length = 1686

 Score =  253 bits (646), Expect = 3e-65
 Identities = 122/227 (53%), Positives = 156/227 (68%), Gaps = 4/227 (1%)
 Frame = -2

Query: 684 FNFMTSEEVRSQSVLKITNPDLLDACDRAVDKGLYDPALGPYNDGK-CTTCEQRSSDCTG 508
           F+F+T EEVR  S +KITNP LLD  +R V  GLYDPALGP ++   C TC QRS++C G
Sbjct: 20  FSFLTDEEVRKHSFVKITNPRLLDLVERPVPGGLYDPALGPLSERTICKTCGQRSTNCPG 79

Query: 507 HCGHIELVFPVYNPLLFDKLYNIIQQTCFSCFHLRADRNLIDSCTSRLQMIAKGDIIGAK 328
           HCGHI+LV PVYNPLLF+ L+ ++Q+TCF CFH R  R  ++ C  +L++I KGDI+GAK
Sbjct: 80  HCGHIDLVSPVYNPLLFNFLHKLLQRTCFLCFHFRMQRGQVEKCIKQLELIVKGDIVGAK 139

Query: 327 RLEEGSSSDIIACPEDSEGSHASCSTVHSG---ESSDFQDQRTWSSLQFNEATSVLKNIF 157
           RLE  S S+ +  PE+S+ SH SC T+HSG      +   Q+ W+SLQF EA SVL N  
Sbjct: 140 RLESVSPSEAL-YPEESDLSHESCPTIHSGVQCNDGEHTRQQGWTSLQFTEAMSVLNNFL 198

Query: 156 DNRTSKCKQCGAKNPKITKPSFGWLHSSGLSGTELRANTIRSAQLNG 16
             +  KCK C + NP ITKP+FGW H+SG+S   +RAN I   QL G
Sbjct: 199 KPKFKKCKNCESSNPNITKPTFGWFHTSGMSDASIRANVITGHQLGG 245


>ref|XP_002308049.1| predicted protein [Populus trichocarpa] gi|222854025|gb|EEE91572.1|
           predicted protein [Populus trichocarpa]
          Length = 1168

 Score =  248 bits (634), Expect = 8e-64
 Identities = 115/228 (50%), Positives = 156/228 (68%), Gaps = 3/228 (1%)
 Frame = -2

Query: 684 FNFMTSEEVRSQSVLKITNPDLLDACDRAVDKGLYDPALGPYNDGKCTTCEQRSSDCTGH 505
           F+F+T EEV   S +KIT+  LLD  D+ V  GLYDPA+GP  D  C TC QRS++CTGH
Sbjct: 16  FSFLTDEEVHKHSFVKITSARLLDTLDKPVPGGLYDPAMGPLGDEPCKTCGQRSTNCTGH 75

Query: 504 CGHIELVFPVYNPLLFDKLYNIIQQTCFSCFHLRADRNLIDSCTSRLQMIAKGDIIGAKR 325
           CGHI+L+ PVYNPLLF+ L+ ++Q+TCF CFH RAD N ++   S+L++I KGD++GAKR
Sbjct: 76  CGHIDLISPVYNPLLFNFLHKLLQRTCFFCFHFRADSNQVEKFVSQLELIIKGDVVGAKR 135

Query: 324 LEEGSSSDIIACPEDSEGSHASCSTVHSG---ESSDFQDQRTWSSLQFNEATSVLKNIFD 154
           L+  S  +  + PEDS+GS  SCST+HSG    +++   Q  W+SLQ +EA S+L N   
Sbjct: 136 LDSFSPIE-ASLPEDSDGSSESCSTIHSGARHPNNEQSKQSEWTSLQLSEAMSILNNFLK 194

Query: 153 NRTSKCKQCGAKNPKITKPSFGWLHSSGLSGTELRANTIRSAQLNGSY 10
             + KCK C A NP I KP+FGW H +GLS   +R+N I+   + G +
Sbjct: 195 LESKKCKNCSASNPNIRKPTFGWFHWAGLSNAAIRSNLIKQQTIEGPF 242


>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score =  220 bits (560), Expect = 3e-55
 Identities = 109/227 (48%), Positives = 151/227 (66%), Gaps = 5/227 (2%)
 Frame = -2

Query: 687 QFNFMTSEEVRSQSVLKITNPDLLDACDRAVDKGLYDPALGPYNDGK-CTTCEQRSSDCT 511
           +F+F T EEVR  S  KIT+P +LD+  R V  GLYDPALG  ++   C +C QRS  C 
Sbjct: 16  KFSFFTDEEVRKYSFKKITSPLMLDSVQRPVPGGLYDPALGSIDENTPCQSCGQRSFYCP 75

Query: 510 GHCGHIELVFPVYNPLLFDKLYNIIQQTCFSCFHLRADRNLIDSCTSRLQMIAKGDIIGA 331
           GHCGHI+LV  VYNPLLF+ L+N++Q+TCF C H +   +L+    S+L++I+KGD++GA
Sbjct: 76  GHCGHIDLVSSVYNPLLFNLLHNLLQKTCFFCHHFKTSSSLVQKYVSQLELISKGDVVGA 135

Query: 330 KRLEEGSSSDIIACPEDSEGSHASCSTVHSGESSD----FQDQRTWSSLQFNEATSVLKN 163
           K L+  S S+  + PEDS+GSH SCS+  +  + D       Q+ W+SLQ  EA SV+ N
Sbjct: 136 KNLDSISPSE-SSYPEDSDGSHVSCSSTVNSSARDNCSVHLKQQEWTSLQCIEAMSVMDN 194

Query: 162 IFDNRTSKCKQCGAKNPKITKPSFGWLHSSGLSGTELRANTIRSAQL 22
               +   CK C AK+P++TKP+FGW H +GLS  + RAN IR ++L
Sbjct: 195 FLKLKHRDCKNCKAKSPQVTKPTFGWFHMAGLSDAQTRANVIRGSKL 241


>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
           vinifera]
          Length = 1740

 Score =  220 bits (560), Expect = 3e-55
 Identities = 109/227 (48%), Positives = 151/227 (66%), Gaps = 5/227 (2%)
 Frame = -2

Query: 687 QFNFMTSEEVRSQSVLKITNPDLLDACDRAVDKGLYDPALGPYNDGK-CTTCEQRSSDCT 511
           +F+F T EEVR  S  KIT+P +LD+  R V  GLYDPALG  ++   C +C QRS  C 
Sbjct: 65  KFSFFTDEEVRKYSFKKITSPLMLDSVQRPVPGGLYDPALGSIDENTPCQSCGQRSFYCP 124

Query: 510 GHCGHIELVFPVYNPLLFDKLYNIIQQTCFSCFHLRADRNLIDSCTSRLQMIAKGDIIGA 331
           GHCGHI+LV  VYNPLLF+ L+N++Q+TCF C H +   +L+    S+L++I+KGD++GA
Sbjct: 125 GHCGHIDLVSSVYNPLLFNLLHNLLQKTCFFCHHFKTSSSLVQKYVSQLELISKGDVVGA 184

Query: 330 KRLEEGSSSDIIACPEDSEGSHASCSTVHSGESSD----FQDQRTWSSLQFNEATSVLKN 163
           K L+  S S+  + PEDS+GSH SCS+  +  + D       Q+ W+SLQ  EA SV+ N
Sbjct: 185 KNLDSISPSE-SSYPEDSDGSHVSCSSTVNSSARDNCSVHLKQQEWTSLQCIEAMSVMDN 243

Query: 162 IFDNRTSKCKQCGAKNPKITKPSFGWLHSSGLSGTELRANTIRSAQL 22
               +   CK C AK+P++TKP+FGW H +GLS  + RAN IR ++L
Sbjct: 244 FLKLKHRDCKNCKAKSPQVTKPTFGWFHMAGLSDAQTRANVIRGSKL 290


>ref|XP_003537204.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
           max]
          Length = 1653

 Score =  208 bits (529), Expect = 1e-51
 Identities = 111/224 (49%), Positives = 143/224 (63%), Gaps = 4/224 (1%)
 Frame = -2

Query: 684 FNFMTSEEVRSQSVLKITNPDLLDACDRAVDKGLYDPALGPYNDGK-CTTCEQRSSDCTG 508
           F+F+T +E+R  S +KIT+P L+D     V  GLYD ALGP++D   C +C Q S  C G
Sbjct: 17  FSFLTDDEIRRSSRVKITSPILVDFLLHPVPDGLYDAALGPFDDKSLCKSCGQTSKHCPG 76

Query: 507 HCGHIELVFPVYNPLLFDKLYNIIQQTCFSCFHLRADRNLIDSCTSRLQMIAKGDIIGAK 328
           H GHIELV PVYNPL+F+ L NI+Q+TCF+C H RA    +D  TS+L++I KGDII AK
Sbjct: 77  HFGHIELVSPVYNPLMFNILSNILQRTCFTCHHFRAPSKEVDIRTSQLELIMKGDIIRAK 136

Query: 327 RLEE---GSSSDIIACPEDSEGSHASCSTVHSGESSDFQDQRTWSSLQFNEATSVLKNIF 157
           RLE    G S D     E         S  +S E    Q    W+SLQF+EA SVL+ + 
Sbjct: 137 RLESIIPGKSVDSFNPDESIHPGDGDESQCYSAE----QLGENWTSLQFSEAMSVLRKLL 192

Query: 156 DNRTSKCKQCGAKNPKITKPSFGWLHSSGLSGTELRANTIRSAQ 25
             +  KC++CGAKNPKI+KP+FGW H + LS  E RA+TIRS +
Sbjct: 193 TKKHKKCQKCGAKNPKISKPTFGWFHMNVLSADETRADTIRSVE 236