BLASTX nr result

ID: Bupleurum21_contig00022749 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022749
         (758 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321992.1| predicted protein [Populus trichocarpa] gi|2...    94   4e-17
ref|XP_002264990.1| PREDICTED: uncharacterized protein At4g00950...    77   5e-12
ref|XP_002516652.1| conserved hypothetical protein [Ricinus comm...    75   1e-11
ref|XP_002867481.1| hypothetical protein ARALYDRAFT_492001 [Arab...    74   3e-11
ref|XP_002317784.1| predicted protein [Populus trichocarpa] gi|2...    72   1e-10

>ref|XP_002321992.1| predicted protein [Populus trichocarpa] gi|222868988|gb|EEF06119.1|
           predicted protein [Populus trichocarpa]
          Length = 203

 Score = 93.6 bits (231), Expect = 4e-17
 Identities = 75/205 (36%), Positives = 88/205 (42%), Gaps = 7/205 (3%)
 Frame = +2

Query: 17  TPKLCLYNTFSSKTREPLGMLTPPLHSFASIPFKWEEVPGKPRXXXXXXXXXXXXXXXXX 196
           TPKL L++  S     P GMLTPP+H+ AS+PFKWEE PGKPR                 
Sbjct: 15  TPKLSLFSLSSKLHESPAGMLTPPIHTLASVPFKWEEAPGKPR--------PSCATQSKP 66

Query: 197 XXVRCLVPPPRLMSSNTSKVTNMPSPTTVLDDGPYNIGRXXXXXXXXXXXXLQEELG--- 367
              RCL  PPRL+  N +KV+NMPSPTTV  DGPY + R            L E LG   
Sbjct: 67  KFARCLELPPRLL--NEAKVSNMPSPTTVF-DGPY-LPRSLSLGKGRSLSNL-ENLGCGE 121

Query: 368 VDGKEXXXXXXXXXXXXXXENKGKGITDISSVVEN----DEEKVKSTTIRKIKRRXXXXX 535
           V+ KE               NK         +  N    +  +VK T I    RR     
Sbjct: 122 VNSKERVTFGSGRWGFFRKNNKEVAAPSHGDIGVNHGGREAVRVKITRI----RRRSSFL 177

Query: 536 XXXXXXXKALASIYESFKQAFPWKR 610
                       I ESFK A PW R
Sbjct: 178 GLSHTRSHFWTDICESFKHAVPWTR 202


>ref|XP_002264990.1| PREDICTED: uncharacterized protein At4g00950 [Vitis vinifera]
           gi|147794098|emb|CAN71155.1| hypothetical protein
           VITISV_030317 [Vitis vinifera]
           gi|297745486|emb|CBI40566.3| unnamed protein product
           [Vitis vinifera]
          Length = 228

 Score = 76.6 bits (187), Expect = 5e-12
 Identities = 45/94 (47%), Positives = 56/94 (59%)
 Frame = +2

Query: 20  PKLCLYNTFSSKTREPLGMLTPPLHSFASIPFKWEEVPGKPRXXXXXXXXXXXXXXXXXX 199
           PKL L++  + +  EP G  TPPL + AS+PF+WEE PGKPR                  
Sbjct: 13  PKLPLFS-IAMQEPEPSGTQTPPLQTTASVPFRWEEEPGKPR------PCTALVALSKSS 65

Query: 200 XVRCLVPPPRLMSSNTSKVTNMPSPTTVLDDGPY 301
             RCL PPPRL SS+  K++ MPSPTTVL +GPY
Sbjct: 66  SARCLDPPPRLFSSDV-KLSKMPSPTTVL-EGPY 97


>ref|XP_002516652.1| conserved hypothetical protein [Ricinus communis]
           gi|223544147|gb|EEF45671.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 218

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 46/99 (46%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
 Frame = +2

Query: 20  PKLCLYNT----FSSKTREPLGMLTPPLHSFASIPFKWEEVPGKPRXXXXXXXXXXXXXX 187
           PKL L +     +  + ++P G+LTPP+H+ AS+PFKWEE PGKPR              
Sbjct: 17  PKLSLLSLPNKPYEQQQQQP-GLLTPPIHAPASVPFKWEEAPGKPRPSCTNNKSNSNNHH 75

Query: 188 XXXXXV-RCLVPPPRLMSSNTSKVTNMPSPTTVLDDGPY 301
                  RCL  PPRL+    SKV N+PSPTTVL DGPY
Sbjct: 76  PKPKTAKRCLDLPPRLL-FEASKVNNIPSPTTVL-DGPY 112


>ref|XP_002867481.1| hypothetical protein ARALYDRAFT_492001 [Arabidopsis lyrata subsp.
           lyrata] gi|297313317|gb|EFH43740.1| hypothetical protein
           ARALYDRAFT_492001 [Arabidopsis lyrata subsp. lyrata]
          Length = 195

 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 64/213 (30%), Positives = 85/213 (39%), Gaps = 4/213 (1%)
 Frame = +2

Query: 14  STPKLCLYNTFSSKTREPLGMLTPPLHSFASIPFKWEEVPGKPR-XXXXXXXXXXXXXXX 190
           +TPKL L++   S+  E  G+ TPP++   S+PF WEE PGKPR                
Sbjct: 13  ATPKLPLFSKPLSRACETPGLATPPVNIAGSVPFLWEEAPGKPRVSDENKPPASKQNAEG 72

Query: 191 XXXXVRCLVPPPRLMSSNTSKVTNMPSPTTVLDDGPYNIGRXXXXXXXXXXXXLQEELGV 370
               VRCL  PPRL         N PSPTTVL DGPY I R                L V
Sbjct: 73  GGGVVRCLELPPRLF----FPAENEPSPTTVL-DGPYVIPR--------------RSLSV 113

Query: 371 DGKEXXXXXXXXXXXXXXENKGKGITDISSVVEN---DEEKVKSTTIRKIKRRXXXXXXX 541
             +               +   +G  D S        D +     T++  + +       
Sbjct: 114 IRRS--------------DGASEGRFDFSRSTNGRCFDRDGGGGITVKISRVKRKGSLLN 159

Query: 542 XXXXXKALASIYESFKQAFPWKRMPERQRRKSS 640
                + LA +Y+ FKQA PW+R  +   R SS
Sbjct: 160 LSHSSQFLARVYQGFKQAIPWRRRQDNLPRMSS 192


>ref|XP_002317784.1| predicted protein [Populus trichocarpa] gi|222858457|gb|EEE96004.1|
           predicted protein [Populus trichocarpa]
          Length = 182

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 41/95 (43%), Positives = 52/95 (54%)
 Frame = +2

Query: 17  TPKLCLYNTFSSKTREPLGMLTPPLHSFASIPFKWEEVPGKPRXXXXXXXXXXXXXXXXX 196
           TPKL L++        P  MLT P+H  AS+PFKWE+ PGKPR                 
Sbjct: 13  TPKLSLFSLPGRLHESPARMLTSPIHPLASVPFKWEDAPGKPRLPCMPQSDKPKID---- 68

Query: 197 XXVRCLVPPPRLMSSNTSKVTNMPSPTTVLDDGPY 301
              RCL  PPRL++   ++ +N+PSP TVL DGPY
Sbjct: 69  ---RCLELPPRLLTK--AQESNIPSPATVL-DGPY 97


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