BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022746
         (1101 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-a...   353   4e-95
ref|XP_002308876.1| chromatin remodeling complex subunit [Populu...   343   3e-92
ref|XP_002517285.1| helicase, putative [Ricinus communis] gi|223...   340   3e-91
ref|NP_196132.2| DNA/RNA helicase [Arabidopsis thaliana] gi|2026...   314   2e-83
sp|Q9FF61.1|SM3L1_ARATH RecName: Full=Putative SWI/SNF-related m...   314   2e-83

>ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 1-like
            [Vitis vinifera]
          Length = 874

 Score =  353 bits (906), Expect = 4e-95
 Identities = 179/269 (66%), Positives = 212/269 (78%), Gaps = 4/269 (1%)
 Frame = +1

Query: 94   DLSNNPELLQKIVAMLEDGEDFDCPICISTPTNIVITICAHIYCKSCILKTLKRAKPCCP 273
            D+SNNPELL+K+V +L+DGEDFDCPICIS PTNIVIT CAHI+C+ CILKTLKR KPCCP
Sbjct: 607  DVSNNPELLKKMVLVLQDGEDFDCPICISPPTNIVITCCAHIFCRVCILKTLKRTKPCCP 666

Query: 274  LCRHELSVSDLFSPP---SEVGDCTEXXXXXXXXXXXXXXXXXXXXRDQDPTAKSVIFSQ 444
            LCRH LS SDLFS P   +E  +                       RDQ+P+ KSV+FSQ
Sbjct: 667  LCRHPLSQSDLFSAPPESTETDNSEIPSSECTSSKVLTLLKFLSASRDQNPSTKSVVFSQ 726

Query: 445  FRKMLILLEEPLKKAGFKILRLDGSMNAKSRSRIIKDFGVPAPDGPTVLLASLKASGTGV 624
            FRKML+LLE+PLK AGFK LRLDGSMNAK R+++I++FG P P+GPTVLLASLKASG G+
Sbjct: 727  FRKMLLLLEQPLKAAGFKTLRLDGSMNAKRRAQVIEEFGAPGPNGPTVLLASLKASGAGI 786

Query: 625  NLAAASTVYLMEPWWNPAVEEQAMDRVHRIGQTKEVRIVRIIARNSIDERILELQ-GKKK 801
            NL AAS VYL+EPWWNPAVEEQAMDRVHRIGQ ++V+IVR+IARNSI+ERILELQ  KKK
Sbjct: 787  NLTAASRVYLLEPWWNPAVEEQAMDRVHRIGQKEDVKIVRLIARNSIEERILELQERKKK 846

Query: 802  MALEAFNRKVGPTVGREINIDDIRTLMSL 888
            +A EAF R+ G    RE+ ++D+R LMSL
Sbjct: 847  LAKEAFGRR-GLKDRREVGVEDLRMLMSL 874


>ref|XP_002308876.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222854852|gb|EEE92399.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 799

 Score =  343 bits (881), Expect = 3e-92
 Identities = 175/269 (65%), Positives = 206/269 (76%), Gaps = 4/269 (1%)
 Frame = +1

Query: 94   DLSNNPELLQKIVAMLEDGEDFDCPICISTPTNIVITICAHIYCKSCILKTLKRAKPCCP 273
            D+SNNPELL K+V +L+DGEDFDCPICI  PT  VIT CAHI+C+ CILKTL+RAK CCP
Sbjct: 532  DVSNNPELLMKMVTVLQDGEDFDCPICICPPTETVITRCAHIFCRPCILKTLQRAKQCCP 591

Query: 274  LCRHELSVSDLFSPPSEVG---DCTEXXXXXXXXXXXXXXXXXXXXRDQDPTAKSVIFSQ 444
            LCR  LSVSDLFS P E     +                       R ++P  KSV+FSQ
Sbjct: 592  LCRRPLSVSDLFSAPPESSGSDNANTSSRTTTSSKVSALIKLLIASRVENPARKSVVFSQ 651

Query: 445  FRKMLILLEEPLKKAGFKILRLDGSMNAKSRSRIIKDFGVPAPDGPTVLLASLKASGTGV 624
            F+KML+LLEEPLK+AGFKILRLDGSMNAK R+++IK FGVP PDGPTVLLASLKASG G+
Sbjct: 652  FQKMLVLLEEPLKEAGFKILRLDGSMNAKKRAQVIKQFGVPGPDGPTVLLASLKASGAGI 711

Query: 625  NLAAASTVYLMEPWWNPAVEEQAMDRVHRIGQTKEVRIVRIIARNSIDERILELQ-GKKK 801
            NLA AS VYL+EPWWNPAVEEQAMDRVHRIGQ ++V +VR+IA++SI+ERILE+Q  KKK
Sbjct: 712  NLAVASRVYLLEPWWNPAVEEQAMDRVHRIGQEEDVTVVRLIAQSSIEERILEMQERKKK 771

Query: 802  MALEAFNRKVGPTVGREINIDDIRTLMSL 888
            +A EAF R+ G    RE+ IDD+R LMSL
Sbjct: 772  LAKEAFGRR-GTKTQREVGIDDLRALMSL 799


>ref|XP_002517285.1| helicase, putative [Ricinus communis] gi|223543548|gb|EEF45078.1|
           helicase, putative [Ricinus communis]
          Length = 363

 Score =  340 bits (873), Expect = 3e-91
 Identities = 173/270 (64%), Positives = 210/270 (77%), Gaps = 5/270 (1%)
 Frame = +1

Query: 94  DLSNNPELLQKIVAMLEDGEDFDCPICISTPTNIVITICAHIYCKSCILKTLKRAKPCCP 273
           D+SNNPELL+K+VA+L+DGEDFDCPICIS P + VIT CAH++C+ CILKTL+R KPCCP
Sbjct: 96  DVSNNPELLEKVVAVLQDGEDFDCPICISPPIDTVITRCAHVFCRPCILKTLQRMKPCCP 155

Query: 274 LCRHELSVSDLFSPPSEVG--DCTEXXXXXXXXXXXXXXXXXXXX--RDQDPTAKSVIFS 441
           LCR  L++SDLFS P E    D TE                      RD++PTAKSVIFS
Sbjct: 156 LCRRSLTMSDLFSAPPESSHTDNTEISSSKRNTSSKVSALLNLLMAARDKNPTAKSVIFS 215

Query: 442 QFRKMLILLEEPLKKAGFKILRLDGSMNAKSRSRIIKDFGVPAPDGPTVLLASLKASGTG 621
           QF+KML+LLEEPLK AGFKILRLDG+MNAK ++++IK+FG+P P+GPTVLLASLKAS  G
Sbjct: 216 QFQKMLVLLEEPLKAAGFKILRLDGTMNAKKKAQVIKEFGIPGPNGPTVLLASLKASCAG 275

Query: 622 VNLAAASTVYLMEPWWNPAVEEQAMDRVHRIGQTKEVRIVRIIARNSIDERILELQ-GKK 798
           +NLAAAS VYL+EPWWNPAVEEQAMDRVHRIGQ ++V +VR+I RNSI+ERILE+Q  KK
Sbjct: 276 INLAAASKVYLLEPWWNPAVEEQAMDRVHRIGQKEDVTVVRLITRNSIEERILEMQERKK 335

Query: 799 KMALEAFNRKVGPTVGREINIDDIRTLMSL 888
           K+A EAF R+       ++  DD+R LMSL
Sbjct: 336 KLAKEAFGRR--GAKAHDVRTDDLRILMSL 363


>ref|NP_196132.2| DNA/RNA helicase [Arabidopsis thaliana] gi|20260624|gb|AAM13210.1|
            helicase-like transcription factor-like protein
            [Arabidopsis thaliana] gi|31711770|gb|AAP68241.1|
            At5g05130 [Arabidopsis thaliana]
            gi|332003449|gb|AED90832.1| DNA/RNA helicase [Arabidopsis
            thaliana]
          Length = 862

 Score =  314 bits (805), Expect = 2e-83
 Identities = 160/271 (59%), Positives = 201/271 (74%), Gaps = 6/271 (2%)
 Frame = +1

Query: 94   DLSNNPELLQKIVAMLEDGEDFDCPICISTPTNIVITICAHIYCKSCILKTLKRAKPCCP 273
            D+++ PELLQK+VA L+DGEDFDCPICIS PTNI+IT CAHI+C++CIL+TL+R+KP CP
Sbjct: 593  DVTDKPELLQKLVAALQDGEDFDCPICISPPTNIIITRCAHIFCRACILQTLQRSKPLCP 652

Query: 274  LCRHELSVSDLFSPP-----SEVGDCTEXXXXXXXXXXXXXXXXXXXXRDQDPTAKSVIF 438
            LCR  L+ SDL++ P     S   D  +                    R ++P  KSV+F
Sbjct: 653  LCRGSLTQSDLYNAPPPPPDSSNTDGEDAKSSTKSSKVSALLSLLMASRQENPNTKSVVF 712

Query: 439  SQFRKMLILLEEPLKKAGFKILRLDGSMNAKSRSRIIKDFGVPAPDGPTVLLASLKASGT 618
            SQFRKML+LLE PLK AGF ILRLDG+M  K R+++I +FG P   GP VLLASLKASGT
Sbjct: 713  SQFRKMLLLLETPLKAAGFTILRLDGAMTVKKRTQVIGEFGNPELTGPVVLLASLKASGT 772

Query: 619  GVNLAAASTVYLMEPWWNPAVEEQAMDRVHRIGQTKEVRIVRIIARNSIDERILELQGKK 798
            G+NL AAS VYL +PWWNPAVEEQAMDR+HRIGQ +EV+++R+IARNSI+ER+LELQ KK
Sbjct: 773  GINLTAASRVYLFDPWWNPAVEEQAMDRIHRIGQKQEVKMIRMIARNSIEERVLELQQKK 832

Query: 799  K-MALEAFNRKVGPTVGREINIDDIRTLMSL 888
            K +A EAF R+      RE+N++D+  LMSL
Sbjct: 833  KNLANEAFKRRQKKD-EREVNVEDVVALMSL 862


>sp|Q9FF61.1|SM3L1_ARATH RecName: Full=Putative SWI/SNF-related matrix-associated
            actin-dependent regulator of chromatin subfamily A member
            3-like 1; Short=SMARCA3-like protein 1
            gi|10178052|dbj|BAB11535.1| helicase-like transcription
            factor-like protein [Arabidopsis thaliana]
          Length = 881

 Score =  314 bits (805), Expect = 2e-83
 Identities = 160/271 (59%), Positives = 201/271 (74%), Gaps = 6/271 (2%)
 Frame = +1

Query: 94   DLSNNPELLQKIVAMLEDGEDFDCPICISTPTNIVITICAHIYCKSCILKTLKRAKPCCP 273
            D+++ PELLQK+VA L+DGEDFDCPICIS PTNI+IT CAHI+C++CIL+TL+R+KP CP
Sbjct: 612  DVTDKPELLQKLVAALQDGEDFDCPICISPPTNIIITRCAHIFCRACILQTLQRSKPLCP 671

Query: 274  LCRHELSVSDLFSPP-----SEVGDCTEXXXXXXXXXXXXXXXXXXXXRDQDPTAKSVIF 438
            LCR  L+ SDL++ P     S   D  +                    R ++P  KSV+F
Sbjct: 672  LCRGSLTQSDLYNAPPPPPDSSNTDGEDAKSSTKSSKVSALLSLLMASRQENPNTKSVVF 731

Query: 439  SQFRKMLILLEEPLKKAGFKILRLDGSMNAKSRSRIIKDFGVPAPDGPTVLLASLKASGT 618
            SQFRKML+LLE PLK AGF ILRLDG+M  K R+++I +FG P   GP VLLASLKASGT
Sbjct: 732  SQFRKMLLLLETPLKAAGFTILRLDGAMTVKKRTQVIGEFGNPELTGPVVLLASLKASGT 791

Query: 619  GVNLAAASTVYLMEPWWNPAVEEQAMDRVHRIGQTKEVRIVRIIARNSIDERILELQGKK 798
            G+NL AAS VYL +PWWNPAVEEQAMDR+HRIGQ +EV+++R+IARNSI+ER+LELQ KK
Sbjct: 792  GINLTAASRVYLFDPWWNPAVEEQAMDRIHRIGQKQEVKMIRMIARNSIEERVLELQQKK 851

Query: 799  K-MALEAFNRKVGPTVGREINIDDIRTLMSL 888
            K +A EAF R+      RE+N++D+  LMSL
Sbjct: 852  KNLANEAFKRRQKKD-EREVNVEDVVALMSL 881