BLASTX nr result

ID: Bupleurum21_contig00022745 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022745
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522878.1| acyl carrier protein, putative [Ricinus comm...   118   6e-25
ref|XP_002308763.1| predicted protein [Populus trichocarpa] gi|2...   117   8e-25
ref|XP_004166074.1| PREDICTED: acyl carrier protein 3, mitochond...   112   3e-23
ref|XP_004139528.1| PREDICTED: acyl carrier protein 3, mitochond...   110   1e-22
gb|ABK93716.1| unknown [Populus trichocarpa]                          110   1e-22

>ref|XP_002522878.1| acyl carrier protein, putative [Ricinus communis]
           gi|223537863|gb|EEF39478.1| acyl carrier protein,
           putative [Ricinus communis]
          Length = 126

 Score =  118 bits (295), Expect = 6e-25
 Identities = 62/121 (51%), Positives = 84/121 (69%), Gaps = 3/121 (2%)
 Frame = +2

Query: 116 RKTILGYMRIGVREKEHFVVRDMFR---RQLCTITGTGPDQIMTRVVGLVKGFDRIDATK 286
           R +IL +MR+    ++  +  ++F+   RQ+C  + T PDQ+M RV+GLVK FD+IDA+K
Sbjct: 5   RSSILSHMRLRAFAQQRSLRGNVFKPLQRQMCISSATSPDQVMDRVIGLVKKFDKIDASK 64

Query: 287 VTETADFQKDLSLDSLDRVELVMAIEQEFSVDIPXXXXXXXXXXXXVTKYIISEVDQKIA 466
           VTETA+FQKDL LDSLDRVELVMA EQEFS++IP            V KYI+S  +QK +
Sbjct: 65  VTETANFQKDLCLDSLDRVELVMAFEQEFSIEIPDEQADKLSCCADVAKYIVSGGEQKTS 124

Query: 467 K 469
           +
Sbjct: 125 E 125


>ref|XP_002308763.1| predicted protein [Populus trichocarpa] gi|222854739|gb|EEE92286.1|
           predicted protein [Populus trichocarpa]
          Length = 129

 Score =  117 bits (294), Expect = 8e-25
 Identities = 65/115 (56%), Positives = 78/115 (67%), Gaps = 5/115 (4%)
 Frame = +2

Query: 116 RKTILGYMRI-GVREKEHFVVRD----MFRRQLCTITGTGPDQIMTRVVGLVKGFDRIDA 280
           R +IL ++R+ G  E+  F  R        RQ+CT  GT PD+IM RV+GLVK FD+IDA
Sbjct: 5   RNSILSHIRLRGSAEQFLFAQRGNVFKQLHRQMCTSVGTSPDKIMDRVIGLVKKFDKIDA 64

Query: 281 TKVTETADFQKDLSLDSLDRVELVMAIEQEFSVDIPXXXXXXXXXXXXVTKYIIS 445
           TKVTETADFQKDL LDSLDRVELVMA E+EFS++IP            V KYI+S
Sbjct: 65  TKVTETADFQKDLCLDSLDRVELVMAFEEEFSIEIPEEKADKLTCCADVAKYIVS 119


>ref|XP_004166074.1| PREDICTED: acyl carrier protein 3, mitochondrial-like [Cucumis
           sativus]
          Length = 138

 Score =  112 bits (281), Expect = 3e-23
 Identities = 65/121 (53%), Positives = 79/121 (65%), Gaps = 6/121 (4%)
 Frame = +2

Query: 116 RKTILGYMRI-GVREKEHFVVRD-----MFRRQLCTITGTGPDQIMTRVVGLVKGFDRID 277
           R +IL +M+I G       +++D        R LCT TG   ++I  RV+GLVK FDRID
Sbjct: 13  RNSILKHMKIRGSNNTTKQLMKDENVIEKLTRCLCTSTGRSSNEIADRVIGLVKKFDRID 72

Query: 278 ATKVTETADFQKDLSLDSLDRVELVMAIEQEFSVDIPXXXXXXXXXXXXVTKYIISEVDQ 457
           A KVTETADFQKDLSLDSLDRVELVMA EQEFS+DIP            V +YI S+V++
Sbjct: 73  ACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIDIPEEQADKLTCCADVARYITSQVEE 132

Query: 458 K 460
           K
Sbjct: 133 K 133


>ref|XP_004139528.1| PREDICTED: acyl carrier protein 3, mitochondrial-like [Cucumis
           sativus]
          Length = 130

 Score =  110 bits (276), Expect = 1e-22
 Identities = 64/121 (52%), Positives = 78/121 (64%), Gaps = 6/121 (4%)
 Frame = +2

Query: 116 RKTILGYMRI-GVREKEHFVVRD-----MFRRQLCTITGTGPDQIMTRVVGLVKGFDRID 277
           R +IL +M+I G       +++D        R LC  TG   ++I  RV+GLVK FDRID
Sbjct: 5   RNSILKHMKIRGPNNTTKQLMKDENVIEKLTRCLCASTGRSSNEIADRVIGLVKKFDRID 64

Query: 278 ATKVTETADFQKDLSLDSLDRVELVMAIEQEFSVDIPXXXXXXXXXXXXVTKYIISEVDQ 457
           A KVTETADFQKDLSLDSLDRVELVMA EQEFS+DIP            V +YI S+V++
Sbjct: 65  ACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIDIPEEQADKLTCCADVARYITSQVEE 124

Query: 458 K 460
           K
Sbjct: 125 K 125


>gb|ABK93716.1| unknown [Populus trichocarpa]
          Length = 129

 Score =  110 bits (276), Expect = 1e-22
 Identities = 65/125 (52%), Positives = 77/125 (61%), Gaps = 5/125 (4%)
 Frame = +2

Query: 116 RKTILGYMRI-GVREKEHFVVRD----MFRRQLCTITGTGPDQIMTRVVGLVKGFDRIDA 280
           R +IL +M + G  E+  F  R       R Q+CT  G  PDQIM RV+ LVK FD+IDA
Sbjct: 5   RNSILSHMGLRGSAEQLLFAQRGNVFKQLRWQMCTSAGNSPDQIMDRVIELVKKFDKIDA 64

Query: 281 TKVTETADFQKDLSLDSLDRVELVMAIEQEFSVDIPXXXXXXXXXXXXVTKYIISEVDQK 460
            KVT  ADFQKDLSLDSLDRVELVMA E+EFS +IP            V KYI+S  +QK
Sbjct: 65  NKVTAAADFQKDLSLDSLDRVELVMAFEEEFSFEIPEEKADKLTCCADVAKYIVSGGEQK 124

Query: 461 IAKDD 475
           I   +
Sbjct: 125 IVNPE 129


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