BLASTX nr result

ID: Bupleurum21_contig00022739 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022739
         (1429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531754.1| conserved hypothetical protein [Ricinus comm...   166   1e-38
ref|XP_002265177.1| PREDICTED: PRA1 family protein G2 [Vitis vin...   160   6e-37
ref|XP_002300591.1| predicted protein [Populus trichocarpa] gi|2...   160   1e-36
emb|CAN71154.1| hypothetical protein VITISV_022651 [Vitis vinifera]   157   5e-36
ref|XP_002862740.1| prenylated rab acceptor family protein [Arab...   146   1e-32

>ref|XP_002531754.1| conserved hypothetical protein [Ricinus communis]
           gi|223528590|gb|EEF30610.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 206

 Score =  166 bits (420), Expect = 1e-38
 Identities = 81/177 (45%), Positives = 117/177 (66%)
 Frame = -2

Query: 573 YTTIPVSVSDAMSRSFQNLSTFFSRHRPWPEFISSAGDFNRPDSLTTAASRLRLNSKYFG 394
           YT+IP+S +D +SRS  NL+T  S HRPWPE I+S G F RPDSL++A +RL ++ +YF 
Sbjct: 21  YTSIPISSTDVLSRSLHNLTTAISTHRPWPELIAS-GLFTRPDSLSSALTRLHIHFRYFR 79

Query: 393 VNYAILISTCAAASLLGAPFSLIVIASIFVMWLLLYFFREDQMMIGGSHVSDHVVIAALA 214
           +NYAI++S C A SL+G+P +LI+ A IF +WLL+YFFRED +++ G  VSD +V+  L 
Sbjct: 80  INYAIIVSLCGAVSLIGSPVALILFAFIFALWLLIYFFREDPLVLFGYQVSDRMVLIGLV 139

Query: 213 SVTVIAVWFTGILNTXXXXXXXXXXXSAVHGALRNPEGLFLDENDALASGLIGSHSG 43
            V+V+ ++ +G   +              H  LRN +GLFL + +  +  LIGS SG
Sbjct: 140 VVSVLGIFSSGAFWSLVLGIVIGVLACGFHAILRNTDGLFLGDQEEASGSLIGSGSG 196


>ref|XP_002265177.1| PREDICTED: PRA1 family protein G2 [Vitis vinifera]
          Length = 180

 Score =  160 bits (406), Expect = 6e-37
 Identities = 80/165 (48%), Positives = 102/165 (61%)
 Frame = -2

Query: 600 SPPTAINSGYTTIPVSVSDAMSRSFQNLSTFFSRHRPWPEFISSAGDFNRPDSLTTAASR 421
           S P A  + YT+IP+S +D +SRSF NLS   S  RPWP+F++ A  F+RPDSLT A  R
Sbjct: 2   STPAATPATYTSIPISGADVISRSFHNLSAAVSSRRPWPDFVA-ADVFHRPDSLTVAGER 60

Query: 420 LRLNSKYFGVNYAILISTCAAASLLGAPFSLIVIASIFVMWLLLYFFREDQMMIGGSHVS 241
           +R N+ YF +NY ILI  CA  SL+G P SL+V      MWL+ YFFRED + +GG  VS
Sbjct: 61  VRKNASYFRINYGILILGCAMISLVGTPISLMVWVLTLGMWLIFYFFREDPLFVGGRQVS 120

Query: 240 DHVVIAALASVTVIAVWFTGILNTXXXXXXXXXXXSAVHGALRNP 106
           D +V+  L   +V+AVWFTG+L               VHG  RNP
Sbjct: 121 DRLVLLCLVLASVMAVWFTGVLENLVVGVGIGLLVCCVHGVFRNP 165


>ref|XP_002300591.1| predicted protein [Populus trichocarpa] gi|222847849|gb|EEE85396.1|
           predicted protein [Populus trichocarpa]
          Length = 208

 Score =  160 bits (404), Expect = 1e-36
 Identities = 83/189 (43%), Positives = 115/189 (60%), Gaps = 4/189 (2%)
 Frame = -2

Query: 597 PPTAINSGYTTIPVSVS--DAMSRSFQNLSTFFSRHRPWPEFISSAGDFNRPDSLTTAAS 424
           P T   + YTTIP+S+S  D +SRS QN ++ FS  RPWPE  +S G F RPDS  TA +
Sbjct: 7   PSTTTTTTYTTIPISISAGDVISRSLQNFTSSFSILRPWPELFTS-GSFTRPDSFATALT 65

Query: 423 RLRLNSKYFGVNYAILISTCAAASLLGAPFSLIVIASIFVMWLLLYFFREDQMMIGGSHV 244
           RLR N  +F VNY+I+I  C A SL+G+PFSL++ +S+  +WLLLYFFRED +++ G  V
Sbjct: 66  RLRANFHHFRVNYSIIIYACGALSLIGSPFSLVIFSSVLSLWLLLYFFREDPLVLWGYDV 125

Query: 243 SDHVVIAALASVTVIAVWFTGILNTXXXXXXXXXXXSAVHGALRNPEGLFLDENDA--LA 70
           SD +V+  L  V+V+ VW +G                A+H  LRN +GL +   +A  + 
Sbjct: 126 SDRLVLIGLVLVSVLGVWLSGAAWNLVWGVLIGFLVCAIHAVLRNSDGLLVPGEEAAFVG 185

Query: 69  SGLIGSHSG 43
           SG +    G
Sbjct: 186 SGYVSGSYG 194


>emb|CAN71154.1| hypothetical protein VITISV_022651 [Vitis vinifera]
          Length = 180

 Score =  157 bits (398), Expect = 5e-36
 Identities = 79/165 (47%), Positives = 100/165 (60%)
 Frame = -2

Query: 600 SPPTAINSGYTTIPVSVSDAMSRSFQNLSTFFSRHRPWPEFISSAGDFNRPDSLTTAASR 421
           S P A  + YT+IP+S +D +SRSF NLS   S  RPWP+F++ A  F+RPDSLT A  R
Sbjct: 2   STPAATPATYTSIPISGADVISRSFHNLSAAVSSRRPWPDFVA-ADVFHRPDSLTVAGER 60

Query: 420 LRLNSKYFGVNYAILISTCAAASLLGAPFSLIVIASIFVMWLLLYFFREDQMMIGGSHVS 241
            R N+ YF +NY ILI  CA  SL+G P SL+V      MWL+ YFFRED + +GG  VS
Sbjct: 61  XRKNASYFRINYGILIXGCAMISLVGTPISLMVWVLTLGMWLIFYFFREDPLFVGGRQVS 120

Query: 240 DHVVIAALASVTVIAVWFTGILNTXXXXXXXXXXXSAVHGALRNP 106
           D +V+  L   +V+AVWFT +L               VHG  RNP
Sbjct: 121 DRLVLLCLVLASVMAVWFTXVLENLVVGVGIGLLVCCVHGVFRNP 165


>ref|XP_002862740.1| prenylated rab acceptor family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297308444|gb|EFH38998.1| prenylated rab
           acceptor family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 198

 Score =  146 bits (368), Expect = 1e-32
 Identities = 78/182 (42%), Positives = 108/182 (59%), Gaps = 1/182 (0%)
 Frame = -2

Query: 597 PPTAINSGYTTIPVSVSDAMSRSFQNLSTFFSRHRPWPEFISSAGDFNRPDSLTTAASRL 418
           PPT     YT+IP+   D +SRS  NL++  SRHRPW E + S GDF+ P+S ++   R 
Sbjct: 5   PPTTT---YTSIPLPTGDVISRSIHNLTSAISRHRPWSELVFS-GDFSLPESFSSLLLRS 60

Query: 417 RLNSKYFGVNYAILISTCAAASLLGA-PFSLIVIASIFVMWLLLYFFREDQMMIGGSHVS 241
           + N  YF VNY I+++TCAA +L+ A P +LIV+  I V+WLL +FFRED +++    V 
Sbjct: 61  KTNFNYFFVNYTIVVATCAAFALITANPVALIVVGVIIVLWLLFHFFREDPLILWSFQVG 120

Query: 240 DHVVIAALASVTVIAVWFTGILNTXXXXXXXXXXXSAVHGALRNPEGLFLDENDALASGL 61
           D  V+  L   +V AVWFT                  +H  LRN + LFL+E+DA+  GL
Sbjct: 121 DRTVVLFLVLASVWAVWFTSSAVNLAVGVGVGLLLCIIHSVLRNSDELFLEEDDAVNGGL 180

Query: 60  IG 55
           IG
Sbjct: 181 IG 182


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