BLASTX nr result

ID: Bupleurum21_contig00022733 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022733
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39105.3| unnamed protein product [Vitis vinifera]               67   1e-09
ref|XP_002524100.1| ATP-binding cassette transporter, putative [...    67   1e-09
ref|XP_002309268.1| white-brown-complex ABC transporter family [...    62   4e-08
ref|XP_003521505.1| PREDICTED: ABC transporter G family member 2...    60   1e-07
ref|XP_002322764.1| white-brown-complex ABC transporter family [...    59   5e-07

>emb|CBI39105.3| unnamed protein product [Vitis vinifera]
          Length = 738

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 51/135 (37%), Positives = 70/135 (51%), Gaps = 12/135 (8%)
 Frame = +3

Query: 3   EDTISAMKSLSTD---GGAETDGSNRRKSMSRLGISESPG-------SRFIRKTRYSDQM 152
           E   +AM+S ++    GGAE+ G+  RKS  R  +S SPG       +  IRK+R S Q+
Sbjct: 13  EAVAAAMRSPTSGEATGGAESGGTLSRKSSRRSMMSASPGRAGGNSKNTHIRKSR-SAQI 71

Query: 153 KFEVDELNGGXXXXXXXXXXMGFSF--TAFTVPPNXXXXXXXXXXXXXXXXXXXXXAGML 326
           K ++DE++ G          +GFSF  T FTVPP+                     AGM 
Sbjct: 72  KLDLDEVSSGAALSRASSASLGFSFSFTGFTVPPDEISDFKPFSDDDTPDDLE---AGMR 128

Query: 327 KKKIQTEPTLPLYLK 371
           K++IQ EPTLP+YLK
Sbjct: 129 KQRIQAEPTLPIYLK 143


>ref|XP_002524100.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223536668|gb|EEF38310.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 749

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 53/139 (38%), Positives = 66/139 (47%), Gaps = 16/139 (11%)
 Frame = +3

Query: 3   EDTISAMKSLSTDGGA-------ETDGSNRRKSMSRLGISESPG-------SRFIRKTRY 140
           E   +A KS  T+  A       E+ G+  RKS  RL ++ SPG       +  IRKTR 
Sbjct: 19  ETLAAAFKSPPTNEAAAAGGTSTESSGTLSRKSSKRLMVAASPGRSNGSGKNTHIRKTR- 77

Query: 141 SDQMKFEVDELNGGXXXXXXXXXXMG--FSFTAFTVPPNXXXXXXXXXXXXXXXXXXXXX 314
           S QMKF++D+LN G          +G  FSFT F VP +                     
Sbjct: 78  SAQMKFDLDDLNSGAALSRASSASLGLSFSFTGFAVPQDEIADTKPFSDDDIPEDLE--- 134

Query: 315 AGMLKKKIQTEPTLPLYLK 371
           AGM K K QTEPTLP+YLK
Sbjct: 135 AGMRKPKFQTEPTLPIYLK 153


>ref|XP_002309268.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222855244|gb|EEE92791.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 743

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 50/136 (36%), Positives = 68/136 (50%), Gaps = 13/136 (9%)
 Frame = +3

Query: 3   EDTISAMKS-LSTDGGAE--TDGSNRRKSMSRLGISESPG--------SRFIRKTRYSDQ 149
           E   +A KS ++ DG +E  + G+   KS  RL  + SPG        +  IRK+R S Q
Sbjct: 18  ETVEAAFKSPMNNDGVSEGGSGGTLSGKSSKRLTTAASPGRTTSGGNKNTHIRKSR-SAQ 76

Query: 150 MKFEVDELNGGXXXXXXXXXXMGFSF--TAFTVPPNXXXXXXXXXXXXXXXXXXXXXAGM 323
           MKFE+D++N G          +GFSF  T F +PP+                     AGM
Sbjct: 77  MKFELDDVNSGAALSRASSASLGFSFSFTGFNMPPDEIADSMPFSDDDIPEDLE---AGM 133

Query: 324 LKKKIQTEPTLPLYLK 371
            K+K QTEP+LP+YLK
Sbjct: 134 RKQKFQTEPSLPIYLK 149


>ref|XP_003521505.1| PREDICTED: ABC transporter G family member 22-like [Glycine max]
          Length = 740

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 45/116 (38%), Positives = 56/116 (48%), Gaps = 8/116 (6%)
 Frame = +3

Query: 48  AETDGSNRRKSMSRLGISESPG------SRFIRKTRYSDQMKFEVDELNGGXXXXXXXXX 209
           AE  G+  RKS  R+  + SPG      + +IRK R S Q+K EVDE+  G         
Sbjct: 34  AEGGGALSRKSSWRMTAAPSPGGGGGGRNTYIRKAR-SAQLKVEVDEVGSGVALSRASSA 92

Query: 210 XMG--FSFTAFTVPPNXXXXXXXXXXXXXXXXXXXXXAGMLKKKIQTEPTLPLYLK 371
            +G  FSFT FT+PP+                     AG  K K QTEPTLP+YLK
Sbjct: 93  SLGLSFSFTGFTLPPDEIADSKPFSDDDIPEDIE---AGTPKPKFQTEPTLPIYLK 145


>ref|XP_002322764.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222867394|gb|EEF04525.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 744

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 49/138 (35%), Positives = 66/138 (47%), Gaps = 15/138 (10%)
 Frame = +3

Query: 3   EDTISAMKSLSTDGG-AETDGSN----RRKSMSRLGISESPG--------SRFIRKTRYS 143
           E   +A KS S +     +DGS+     RKS  RL ++ SPG        +  IRK+R S
Sbjct: 18  ETVAAAFKSPSNNEAIGVSDGSSGGTLSRKSSKRLMMAASPGRSTSGGNKNTHIRKSR-S 76

Query: 144 DQMKFEVDELNGGXXXXXXXXXXMGFSF--TAFTVPPNXXXXXXXXXXXXXXXXXXXXXA 317
            QMKF++D+++ G          +GFSF  T F +PP+                     A
Sbjct: 77  AQMKFDLDDVSSGAALSRASSASLGFSFSFTGFNMPPDEIADSKPFSDDDIPEDLE---A 133

Query: 318 GMLKKKIQTEPTLPLYLK 371
           G  K K QTEPTLP+YLK
Sbjct: 134 GTRKPKFQTEPTLPIYLK 151


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